Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0137250-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:2095644:2100604:1 gene:Os08g0137250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FERTILIZATION-INDEPENDENT ENDOSPERM 1 description:Esc-like core component of the polycomb repressive complex 2, Seed size regulation under heat stress (Os08t0137250-01)
Sequence	ATGGGCCCCACTAGTAGGAACCATAAATCATCTCAAAAAGATGTGGCACCGAATGAAGCC AAACCACCCCGATATCCACAGCGCAACCGCTCCATCACTGCCTCTGCCTCTGCCTCTGCC TTTGCCTCTCCCGCTGTTGCCAACTCCAGAGTTGCCAAGGAAAGGCCATCTTCATCAACT GCTGGTGAAGGTGAACCACAGGAAACGGTGCTAAAGCTTCCAAGCATCCCAACACTTCCT GCACGGATGGCAAAGTTGGTGCCATTAGAGGGGTTGGGATGCGAGGCAGCGGTGGGATCG CTAACACCGAGTCGGGAGCGAGAATACAAGGTGACCAACAAGCACACTGAGGGAAGGCGC CCTGTCTACGCCATTGTCTTCAATTTCCTCGATGTTCGCTACTACGACATCTTCGCCACC GCCTGTGGCCCTCGTCTTTCAACCTACCGCTGCCTCATGAATGGCAAATTTGCTCTTCTG CAAAGCTATCTTGATGACGATATGAATGAGTCATTCTTCACTGTGAGCTGGGCTTGCGAC ATTGATGGCAATCCATTGTTAGTAGCTGCAGGAAGCACTGGAATCATTCGAGTCATCAAC TGTGCCACTGAGAAGATATATAAGAGTCTTGTTGGCCATGGTGGTTCAGTAAACGAAATA AAGTCTCAACCATCGAATCCTTCACTCATCATTTCTGCAAGCAAGGATGAATCTATTAAG CTGTGGAATGTGCAGACAGGGATCTTAATTTTGGTTTTTGGTGGAGTAGGAGGTCACCGA CACGAAGTACTTGGTGTTGACTTCCACACATCTGATATCTACCGCTTTTTAAGTTGTGGA ATGGACAACACTGTGAGAATCTGGTCAATGAAAGAATTCTGGGAATATGTTGAGAAATCC TATTCATGGACTGATGCTACATCAAAATTTCCAACAAAATTTGTCCAATTTCCGGTCCTG TGTGCTGAAATACATTCTAACTATGTAGACTGTACTAAATGGCTTGGGGACTTTGTCCTG TCAAAGAGTGTTGAAAATGAAATCTTGCTGTGGGAATCGATCACAAAAGAAGAAAACCCT GGCGAGGGTCACATTGATGTTCTTCAGAAGTACCCTGTGCCAGAATGTAACATCTGGTTC ATGAAATTCTCATGTGATTTTCACCACAATCAGTTGGCAATAGGAAACCGTGATGGTAAA GTCTATGTCTGGAAAGTACAGACCAGCCCTCCTGTTCTAATTGCTCGGCTCAATAATCCA CAAGTGAAATCAGCCATAAGGCAGACTGCAGTGTCCTTTGATGGAAGCACAATCCTTGCC TGCACAGAGGATGGCAACATATGGCGTTGGGATGAAGTGGATCACCCAACCGCCCCAGTC CCAAGCAAGAAACAAAAGTGA

Peptide Sequence

PEP ID	Os08t0137250-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:2095644:2100604:1 gene:Os08g0137250 transcript:Os08t0137250-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FERTILIZATION-INDEPENDENT ENDOSPERM 1 description:Esc-like core component of the polycomb repressive complex 2, Seed size regulation under heat stress (Os08t0137250-01)
Sequence	MGPTSRNHKSSQKDVAPNEAKPPRYPQRNRSITASASASAFASPAVANSRVAKERPSSST AGEGEPQETVLKLPSIPTLPARMAKLVPLEGLGCEAAVGSLTPSREREYKVTNKHTEGRR PVYAIVFNFLDVRYYDIFATACGPRLSTYRCLMNGKFALLQSYLDDDMNESFFTVSWACD IDGNPLLVAAGSTGIIRVINCATEKIYKSLVGHGGSVNEIKSQPSNPSLIISASKDESIK LWNVQTGILILVFGGVGGHRHEVLGVDFHTSDIYRFLSCGMDNTVRIWSMKEFWEYVEKS YSWTDATSKFPTKFVQFPVLCAEIHSNYVDCTKWLGDFVLSKSVENEILLWESITKEENP GEGHIDVLQKYPVPECNIWFMKFSCDFHHNQLAIGNRDGKVYVWKVQTSPPVLIARLNNP QVKSAIRQTAVSFDGSTILACTEDGNIWRWDEVDHPTAPVPSKKQK

Transcript Sequence

Transcript ID	Os08t0137250-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:2095644:2100604:1 gene:Os08g0137250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FERTILIZATION-INDEPENDENT ENDOSPERM 1 description:Esc-like core component of the polycomb repressive complex 2, Seed size regulation under heat stress (Os08t0137250-01)
Sequence	TCCACCCCGCCCGCCGCCGCTCCCTATTCCTATTTAATCCCATCTCTCTTCCTCATCACC GCTCTCCTCTCTCCAGGCAAGAGGAAGTACGCAACCTCAAGCCGGACAAGACGTGAGCAA AGATGGGCCCCACTAGTAGGAACCATAAATCATCTCAAAAAGATGTGGCACCGAATGAAG CCAAACCACCCCGATATCCACAGCGCAACCGCTCCATCACTGCCTCTGCCTCTGCCTCTG CCTTTGCCTCTCCCGCTGTTGCCAACTCCAGAGTTGCCAAGGAAAGGCCATCTTCATCAA CTGCTGGTGAAGGTGAACCACAGGAAACGGTGCTAAAGCTTCCAAGCATCCCAACACTTC CTGCACGGATGGCAAAGTTGGTGCCATTAGAGGGGTTGGGATGCGAGGCAGCGGTGGGAT CGCTAACACCGAGTCGGGAGCGAGAATACAAGGTGACCAACAAGCACACTGAGGGAAGGC GCCCTGTCTACGCCATTGTCTTCAATTTCCTCGATGTTCGCTACTACGACATCTTCGCCA CCGCCTGTGGCCCTCGTCTTTCAACCTACCGCTGCCTCATGAATGGCAAATTTGCTCTTC TGCAAAGCTATCTTGATGACGATATGAATGAGTCATTCTTCACTGTGAGCTGGGCTTGCG ACATTGATGGCAATCCATTGTTAGTAGCTGCAGGAAGCACTGGAATCATTCGAGTCATCA ACTGTGCCACTGAGAAGATATATAAGAGTCTTGTTGGCCATGGTGGTTCAGTAAACGAAA TAAAGTCTCAACCATCGAATCCTTCACTCATCATTTCTGCAAGCAAGGATGAATCTATTA AGCTGTGGAATGTGCAGACAGGGATCTTAATTTTGGTTTTTGGTGGAGTAGGAGGTCACC GACACGAAGTACTTGGTGTTGACTTCCACACATCTGATATCTACCGCTTTTTAAGTTGTG GAATGGACAACACTGTGAGAATCTGGTCAATGAAAGAATTCTGGGAATATGTTGAGAAAT CCTATTCATGGACTGATGCTACATCAAAATTTCCAACAAAATTTGTCCAATTTCCGGTCC TGTGTGCTGAAATACATTCTAACTATGTAGACTGTACTAAATGGCTTGGGGACTTTGTCC TGTCAAAGAGTGTTGAAAATGAAATCTTGCTGTGGGAATCGATCACAAAAGAAGAAAACC CTGGCGAGGGTCACATTGATGTTCTTCAGAAGTACCCTGTGCCAGAATGTAACATCTGGT TCATGAAATTCTCATGTGATTTTCACCACAATCAGTTGGCAATAGGAAACCGTGATGGTA AAGTCTATGTCTGGAAAGTACAGACCAGCCCTCCTGTTCTAATTGCTCGGCTCAATAATC CACAAGTGAAATCAGCCATAAGGCAGACTGCAGTGTCCTTTGATGGAAGCACAATCCTTG CCTGCACAGAGGATGGCAACATATGGCGTTGGGATGAAGTGGATCACCCAACCGCCCCAG TCCCAAGCAAGAAACAAAAGTGAAGCAAGGATTATATTAATTGAAATTAATAAGGCTGAA TTGGCGATTTGTTCTTGGTATACTTTGTTATACTACTTTGCCTTAGCGTTCATCAAAACT GCCATTTGATTTTCCAACATTCAGAAAACTCTATAGCTGGATGTAAGATTTATTATCGCA AGATATTCAGGATGTTGGTCGGTGACTTGGTTTTATCAATAATTTGCTGGGAATATAGTA CTTAATCT