Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0132600-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:1833617:1836424:1 gene:Os08g0132600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0132600-01);Conserved hypothetical protein. (Os08t0132600-02)
Sequence

ATGGCGGATGAAAGCGAGCGGAGCGGTATGGTAATCGACGACGTCGGCGGCGGACTGAAT
CTTCCAATAATTGTTGCAGGCAAGCGTAAGCGGGAGCTCACATGGGAAGAGAAGGCGTTG
ACAGTTCTTGATATTGTCGGGTCCCAACAGCACCCCGCATGCCAACCTGCCGAGCGTGAT
TGCAGCCTCATAGACTCGGAGAAAGATTACTCATCTATGGCCGGCTGCCAGGCCGGAGAA
CACGCTAGTATATTTGGCATTGACAAGAATGGGGATGATTCTGATGAACCGTGTGCTAAG
GATGATGCCAAGCAAAGTGATGTGGCTCCTCTGAAGGAGGAGGAGAATTGGGAGCTGGAC
AGTGAACCAGAGCTCACATGGGATGAGAAGGTGGTTGAAGTTCTAAACATAGTTCGACGC
CGAGAGATCACCGAATATAACCCCAAGCAGTTTTGCTCAATTCCTACTCGATTTTGTGCC
TACAACATAGCCTTCTTTGACCTGGACAAAGAGTCAAAGCTTGCACGTGGACCACCTATC
AAGTCACTAGCTTTCCCCGACTACTGGTGGGAGATGGACTCTGTCAATGTGATTGCAATC
AAGGTGGCCGAGTCTGATGTGGGTTACCCTATCAGGGTATTTGGCACTGTGCTGGCCAGG
GATGAGTACGATTTCAGGTGTGTCTATTTGTTCAGGCGTGACAGGAACAATCCACAGATC
ATCACCTCGCCGGAGGACACACTAACTCTGACAGGACCTAATCGAGCGCTGGGTGCAATA
GACAAAATGTATTTCGAGTTCAATTTGAAGATTAGAGACGGTGATGTCGACAAAGATTTC
TGCAAAGGTGTGCGAGAACACAATGCCATCTGCTATACAAAGCAGCCGATGACTTTATCG
CTAGAGAGCTGCCTGAGTAGAATTGATTTTGTGTATAGTCCTGTTCAATTAGCTGTGGAA
GCTTCTGTTGCAGTCAAAATTAAGGGGGTTGTATCCAAGTTTTTCACTGGCAAAGTGACT
GCTTGGACTACTGGAGATGATCAGAACAAAATCATCCTGTATGACAGTGAAGTGGAAGGC
AGGAACAGAGTTCTTGGAGCTGATGGATCAGTCGATCTGACTCGCTGTTTCGTAGCCGTC
AATTTGGATGATGAACTGGTGCTCAATGTCTGTGTTTCTGAAGGAGCTGGCTCAATCTTT
GAGCTCGTTCTTGGACACAATGATGAAGAATGTGTCCTTGAGCAAGGTCCCTATGAACTG
CAGGTGAATGTTGTTTGGACAGCTGCCTTGAAGCATCGACAGCGCAGAAAATTGTTTGAG
CGTATCGGTGACTTCCGCGTGTTAAGGTGA

Peptide Sequence

PEP ID

Os08t0132600-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:1833617:1836424:1 gene:Os08g0132600 transcript:Os08t0132600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0132600-01);Conserved hypothetical protein. (Os08t0132600-02)
Sequence

MADESERSGMVIDDVGGGLNLPIIVAGKRKRELTWEEKALTVLDIVGSQQHPACQPAERD
CSLIDSEKDYSSMAGCQAGEHASIFGIDKNGDDSDEPCAKDDAKQSDVAPLKEEENWELD
SEPELTWDEKVVEVLNIVRRREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPI
KSLAFPDYWWEMDSVNVIAIKVAESDVGYPIRVFGTVLARDEYDFRCVYLFRRDRNNPQI
ITSPEDTLTLTGPNRALGAIDKMYFEFNLKIRDGDVDKDFCKGVREHNAICYTKQPMTLS
LESCLSRIDFVYSPVQLAVEASVAVKIKGVVSKFFTGKVTAWTTGDDQNKIILYDSEVEG
RNRVLGADGSVDLTRCFVAVNLDDELVLNVCVSEGAGSIFELVLGHNDEECVLEQGPYEL
QVNVVWTAALKHRQRRKLFERIGDFRVLR

Transcript Sequence

Transcript ID

Os08t0132600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:1833617:1836424:1 gene:Os08g0132600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0132600-01);Conserved hypothetical protein. (Os08t0132600-02)
Sequence

AAGGCTCTCTCCCCTCCGGCGGCGACAGGACGGGTTCTCGATCAGGGTTGCCAGCGAACA
CGTCTACGATGGCGGATGAAAGCGAGCGGAGCGGTATGGTAATCGACGACGTCGGCGGCG
GACTGAATCTTCCAATAATTGTTGCAGGCAAGCGTAAGCGGGAGCTCACATGGGAAGAGA
AGGCGTTGACAGTTCTTGATATTGTCGGGTCCCAACAGCACCCCGCATGCCAACCTGCCG
AGCGTGATTGCAGCCTCATAGACTCGGAGAAAGATTACTCATCTATGGCCGGCTGCCAGG
CCGGAGAACACGCTAGTATATTTGGCATTGACAAGAATGGGGATGATTCTGATGAACCGT
GTGCTAAGGATGATGCCAAGCAAAGTGATGTGGCTCCTCTGAAGGAGGAGGAGAATTGGG
AGCTGGACAGTGAACCAGAGCTCACATGGGATGAGAAGGTGGTTGAAGTTCTAAACATAG
TTCGACGCCGAGAGATCACCGAATATAACCCCAAGCAGTTTTGCTCAATTCCTACTCGAT
TTTGTGCCTACAACATAGCCTTCTTTGACCTGGACAAAGAGTCAAAGCTTGCACGTGGAC
CACCTATCAAGTCACTAGCTTTCCCCGACTACTGGTGGGAGATGGACTCTGTCAATGTGA
TTGCAATCAAGGTGGCCGAGTCTGATGTGGGTTACCCTATCAGGGTATTTGGCACTGTGC
TGGCCAGGGATGAGTACGATTTCAGGTGTGTCTATTTGTTCAGGCGTGACAGGAACAATC
CACAGATCATCACCTCGCCGGAGGACACACTAACTCTGACAGGACCTAATCGAGCGCTGG
GTGCAATAGACAAAATGTATTTCGAGTTCAATTTGAAGATTAGAGACGGTGATGTCGACA
AAGATTTCTGCAAAGGTGTGCGAGAACACAATGCCATCTGCTATACAAAGCAGCCGATGA
CTTTATCGCTAGAGAGCTGCCTGAGTAGAATTGATTTTGTGTATAGTCCTGTTCAATTAG
CTGTGGAAGCTTCTGTTGCAGTCAAAATTAAGGGGGTTGTATCCAAGTTTTTCACTGGCA
AAGTGACTGCTTGGACTACTGGAGATGATCAGAACAAAATCATCCTGTATGACAGTGAAG
TGGAAGGCAGGAACAGAGTTCTTGGAGCTGATGGATCAGTCGATCTGACTCGCTGTTTCG
TAGCCGTCAATTTGGATGATGAACTGGTGCTCAATGTCTGTGTTTCTGAAGGAGCTGGCT
CAATCTTTGAGCTCGTTCTTGGACACAATGATGAAGAATGTGTCCTTGAGCAAGGTCCCT
ATGAACTGCAGGTGAATGTTGTTTGGACAGCTGCCTTGAAGCATCGACAGCGCAGAAAAT
TGTTTGAGCGTATCGGTGACTTCCGCGTGTTAAGGTGATATGTAGTATGAAGATTTATAT
GGGGGAAGCTGTTACATCTCAAGCAGTTCTTTCTTGTTATATAGATTATAATTTTTTTGT
TCAGCTGAGTTGAACTCGTGCTTAACTGAAAATCTGCCTGCAAGACTTATTTAGTTATAT
GTACTGGTAGACTGGTAATCTATAAGATTACTGATGTCTAGTAGGGAGTATGGATCTGTC
TGGTAGTCTGTATAACCTTTTCTGAACCTACCAAAGTTTATTTTGCGTTCTTGG