Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0131000-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:1749850:1752468:1 gene:Os08g0131000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0131000-02)
Sequence	ATGGCCGCGCTGCGACTGCCAAGAGCGCCGACCACCGCGGCGCTCGCCGCCGGCGTCCCC CACCGGTTCCCGGCACCGGAGGGGGAGCCTCCGCCGCCGCGCGGCCCCAACAGGGCGCAC CTCAACGCGCTGCTCACGTCGTACGGCCGCCGCGGCCGCCTCCGCGACGCCCAGCTCCTG TTCGACCAAATGCCCAGCCGCGACGTCATCTCCTGGACCGCCCTCCTCACCGCCTACGCC GACGGGGGAGACCTCGCCTCCGCGCGCCTCGTCTTCGACGACATGCCCCGCCGCAACGCC CCGTCCTGGAACGCGCTGCTCTCCGTCTACCTCCGCGCGGCGCGCCCGCGGGCTGCCCAC GCGCTCTTCTACAAGATGCCGGCCAAGAACGCGGTGTCCTACGGTGCCATCATCTCGGGG CTCGCCAAGGCGGAGATGCTGCATGAGGCGGAGTTGGTGTATGAGGAGATGCCATGGCAG TGGCGTGACCCAGTAGGGTCGAATGCGCTGATGGCTGGGTACTTGAGGGTCGGGGAGCTT GCCATGGCACTGAGGGTGTTCGAGGGAATGACGGTGAGGGATGTCATTTCCTGGAGCGCC ATGGTCGATGGCCTCTGTAAACATGGGAGTGTGTCAGAGGCGAGGAGGGTGTTTGACGCC ATGCCAGAGCGGAATGTGGTGTCTTGGACTTCGATGATTCGGGGATATGTGAAACGTGGG ATGTGCAGAGATGGTCTCCTCCTGTTCCTGAATATGAGAAGAGAAGGTGTTCAGGTTAAC ACAACGACACTCTCAGTTGCGCTGGATGCTTGTGCTGCGGCCAGTCTTGCCAGAGAAGGG ATTCAGATTCACAATTTGATTATATCAATGGGATTTGAGCTGGATATTTTCTTGGGTGAT TCAATAATCATAATGTATTCTCGTTTTGGTTGGATGGTTGATGCAAAAAGGGCGTTCGAC TGCATGCAGCAGAAAGACATAGTATCATGGAACTCACTGATCACAGGTTACGTTCAGCAT GACATGGTTGAAGAAGCACATGTGCTGTTCAAGTTGATGCATCAGAAGGATGCTGTTTCT TGGACATCAATGGTTGTTGGGTTTGCTAACAGGGGTTGGATGAGGGAATCTGTTGAACTT TTCGAGCAAATGCCAGTAAAAGACGAGGTCGCTTGGACTGCGATCATTTCTAGTTTTATC ACAAATGGGGACTATCTAAGTGCAGTGCGGTGGTTTTGCCGCATGTCACAAGAAGGATGC AAACCTAACACAATAGCTTTCAGTTGTCTGCTGAGTGCTTTGGCTAGCCTGGCAATGTTG AATCAGGGAAGGCAAGCTCATGCATATTCGATCAACATGGGATGGGTGTTTGACTCTGCC GTTCACACTTCTTTGGTATCGATGTATGCAAAATGTGGAAGGTTGGCTGAGGCTTATCAT GTTTTCTCAAGCATTAGCAACCCAAGCCTTATTGCTATTAATTCTATGATTACAGCATTT GTGCAACATGGTTTCGTTGAAGATGCGCTGAAACTATTTACCAAAATGCAAAATGCTGGA TACAAGCCTAATCATGTTACATTTTTAGGAATTCTGACTGGTTGCGCACGTGCTGGTTTT GTTCAACAAGGTTACAACTACTTTGAATCAATGAGACCAGTTTATGGTGTAGAGCCAAAC CCTGAGCACTACACATGTATGGTTGATCTTTTAGGTCGTGCAGGCCTCCTTGCTGAAGCA CTGGAAATGATTAACTCAATGCCCCAGAATGATCATTCTGATGCATGGGCAGCTTTGCTC AGTGCTAGTAGTCTCCATTCTAATCTCGCTTTTGCAAAAATAGCAGCACAGAAGCTTCTT GAGAAGGATCCTTACGATGCAACGGCTTACACAGTCCTGTCAAGGATGTTCTCCTCAGCA GGGATGGAGGATGAAGAAATGCTAAAAGTTGTACAGCTATCCAACTTGGCCAGTAAGAGG CCTGGTTATAGCCTTATTATGCAGGATAAGGCCACTGAAATATAA

Peptide Sequence

PEP ID	Os08t0131000-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:1749850:1752468:1 gene:Os08g0131000 transcript:Os08t0131000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0131000-02)
Sequence	MAALRLPRAPTTAALAAGVPHRFPAPEGEPPPPRGPNRAHLNALLTSYGRRGRLRDAQLL FDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSVYLRAARPRAAH ALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGEL AMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRG MCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGD SIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVS WTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGC KPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYH VFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGF VQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALL SASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSSAGMEDEEMLKVVQLSNLASKR PGYSLIMQDKATEI

Transcript Sequence

Transcript ID	Os08t0131000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1749850:1752468:1 gene:Os08g0131000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0131000-02)
Sequence	GGTGGATACGGCGGGTACACTCTGCAAGCCTGTGAACCCAGTAGTCCAGCAGTACTCACC ATGGCCGCGCTGCGACTGCCAAGAGCGCCGACCACCGCGGCGCTCGCCGCCGGCGTCCCC CACCGGTTCCCGGCACCGGAGGGGGAGCCTCCGCCGCCGCGCGGCCCCAACAGGGCGCAC CTCAACGCGCTGCTCACGTCGTACGGCCGCCGCGGCCGCCTCCGCGACGCCCAGCTCCTG TTCGACCAAATGCCCAGCCGCGACGTCATCTCCTGGACCGCCCTCCTCACCGCCTACGCC GACGGGGGAGACCTCGCCTCCGCGCGCCTCGTCTTCGACGACATGCCCCGCCGCAACGCC CCGTCCTGGAACGCGCTGCTCTCCGTCTACCTCCGCGCGGCGCGCCCGCGGGCTGCCCAC GCGCTCTTCTACAAGATGCCGGCCAAGAACGCGGTGTCCTACGGTGCCATCATCTCGGGG CTCGCCAAGGCGGAGATGCTGCATGAGGCGGAGTTGGTGTATGAGGAGATGCCATGGCAG TGGCGTGACCCAGTAGGGTCGAATGCGCTGATGGCTGGGTACTTGAGGGTCGGGGAGCTT GCCATGGCACTGAGGGTGTTCGAGGGAATGACGGTGAGGGATGTCATTTCCTGGAGCGCC ATGGTCGATGGCCTCTGTAAACATGGGAGTGTGTCAGAGGCGAGGAGGGTGTTTGACGCC ATGCCAGAGCGGAATGTGGTGTCTTGGACTTCGATGATTCGGGGATATGTGAAACGTGGG ATGTGCAGAGATGGTCTCCTCCTGTTCCTGAATATGAGAAGAGAAGGTGTTCAGGTTAAC ACAACGACACTCTCAGTTGCGCTGGATGCTTGTGCTGCGGCCAGTCTTGCCAGAGAAGGG ATTCAGATTCACAATTTGATTATATCAATGGGATTTGAGCTGGATATTTTCTTGGGTGAT TCAATAATCATAATGTATTCTCGTTTTGGTTGGATGGTTGATGCAAAAAGGGCGTTCGAC TGCATGCAGCAGAAAGACATAGTATCATGGAACTCACTGATCACAGGTTACGTTCAGCAT GACATGGTTGAAGAAGCACATGTGCTGTTCAAGTTGATGCATCAGAAGGATGCTGTTTCT TGGACATCAATGGTTGTTGGGTTTGCTAACAGGGGTTGGATGAGGGAATCTGTTGAACTT TTCGAGCAAATGCCAGTAAAAGACGAGGTCGCTTGGACTGCGATCATTTCTAGTTTTATC ACAAATGGGGACTATCTAAGTGCAGTGCGGTGGTTTTGCCGCATGTCACAAGAAGGATGC AAACCTAACACAATAGCTTTCAGTTGTCTGCTGAGTGCTTTGGCTAGCCTGGCAATGTTG AATCAGGGAAGGCAAGCTCATGCATATTCGATCAACATGGGATGGGTGTTTGACTCTGCC GTTCACACTTCTTTGGTATCGATGTATGCAAAATGTGGAAGGTTGGCTGAGGCTTATCAT GTTTTCTCAAGCATTAGCAACCCAAGCCTTATTGCTATTAATTCTATGATTACAGCATTT GTGCAACATGGTTTCGTTGAAGATGCGCTGAAACTATTTACCAAAATGCAAAATGCTGGA TACAAGCCTAATCATGTTACATTTTTAGGAATTCTGACTGGTTGCGCACGTGCTGGTTTT GTTCAACAAGGTTACAACTACTTTGAATCAATGAGACCAGTTTATGGTGTAGAGCCAAAC CCTGAGCACTACACATGTATGGTTGATCTTTTAGGTCGTGCAGGCCTCCTTGCTGAAGCA CTGGAAATGATTAACTCAATGCCCCAGAATGATCATTCTGATGCATGGGCAGCTTTGCTC AGTGCTAGTAGTCTCCATTCTAATCTCGCTTTTGCAAAAATAGCAGCACAGAAGCTTCTT GAGAAGGATCCTTACGATGCAACGGCTTACACAGTCCTGTCAAGGATGTTCTCCTCAGCA GGGATGGAGGATGAAGAAATGCTAAAAGTTGTACAGCTATCCAACTTGGCCAGTAAGAGG CCTGGTTATAGCCTTATTATGCAGGATAAGGCCACTGAAATATAACACATACTGAGAACC TTCTAGTTGACTAGTTCTAGATCTCTGACCGATGAAAACAAGAATGATCATGTTACATGG CACTGCTAAATGAGAATTAGGATGGCATAAAAAAGATATCACATGACTTGTACATAATGC CTAAAATGTGGATATCTGACCAGGTGCTTGGTGATATGCTGTTGGCCCAGAACTCGAGAT CCATTTTTCTGGCAGGTCCTTATTTCTTATAGGATTAAGTTTGTCCATTTTGATGCAGCT GAGTTTTCACCCTTAACTATGAAATCATCTAACTTGCACTCTTCAACTACCAAAATGGGC ACAAATAACTCCTTTTCACCACAAAAAAATGTCTTATTTGGCCAGAATAACACTGGTGGT TTTAAGGGTAGGGGTTACACTGATTTTGATAGTTAAAGGGTGAACAATAGATCCTTTCTT TTCTGAGGGTAACAATTAGATAGTATTGTAGTTCATGAATTTACAGTATTTGTTATTTAA GACCTGTCATAATCTTTATATTGATTCCATCTTCTTTTT