Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0130300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:1711379:1715074:-1 gene:Os08g0130300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0130300-00)
Sequence

ATGCCGAGCGGAGGGAGGCGGCTGCCGCCGTGGACGTCGCCGAGGGGGGCGGCGCCGAGG
TGGAGCCCCTGCACGCCTGCGGGCGCGGACGGTTCGGGCCGCGCCGCCCACGCCACGCCG
CCGGCGAGCGGCGGGTGCTCCTCGCACGTGACGCCCCCGGCGAGCGGTGGTGGCGGGTGT
TACGGTTACCGTGTCACGCCGCCGACGAGCGGCGGGTGTTCCCGGCCTCCTAGGGCGCCG
CTGTCGTCGGTGGATTCGCCCTACGTGCGGGCGAAGCAGGCTCAGGTGATTGAAAAGGAC
CCAAACAAGGCAGTTCCATTGTTCTGGGCGGCTATAAACAGTGGTGATCGAATTGAGAGC
GCACTGAAGGATATGGCTACTGTACTGAAGCAAGCAAATCGAGCCGAAGAGGCTATTGAG
GCAATAAGATCCTTCCGTGATCGTTGCCCAAATGAAGCTCAGGAATCTCTTGACAATATT
CTTCTTGACCTGTACAAGAAATGCGGCAGGACAAAAGAGCAGATTGAAATGCTGACATTG
AAGTTGAGAATTGTTGATGAGGAGCTAGCTTCTGGCAGGTGGAAAACCAAGTTGTCTAAA
TCTCATGGAAGAGTAGTTTATTTGTCTCTCAGGGATGAAAAAGCAAGGTTGTTGGGTAAC
CTTGCCTGGGCCCATATGCAGTCTGAAAATTATGATGAGGCCGAAATGCTCTACAGGCAA
GCTCTTGCTATAGAAGCTGATTATAACAAAGAGTGCAACTTAGCTATCTGCCTGATAAAG
ACCGGAAAGGTAGCCGAAGCTAAATACCTTCTCCAATCTATACCTGACAACTGCAGTGAT
GAAAGCCATGTGAGGTCTCTTGCTCGGGCCAGAGAAATGCTTATGGAACTTGAGTCACCA
ACACTCCATTCTCCCATAACTCAGATGAAATCTAAAGAATCATTAATCTGGCTTGCTATT
GATGCGGAGAACCTTGGGCATTTACAGCCACAGGTATCCTCAACTGCTTTGACTCAACTG
AAATCTGAAGAACCACATATTTCAGTTGCTGCTGATGCAGAGAAGCAGGAGGATTGCAAT
TCACAAGTATTTCCATCTCCCATTACTCAGATGAAACGTGAAGAACCAGAAAGTTTGATT
GCTACCAGTGGGGAGAATAATGAGAAATGCCTGAATGAATACCAAGATCTTTCTCGACTG
TTCAATGATGCTGCTACACCCCAGTCGTTGCTTGAGAAACTACGAAAACGGCTGGTGAAA
GAGGACACACTAAATATCAGCATACAGCACCAAGTTCAGATTCCTAGTTTTGTTGAATGC
TTGCCAAACTCTGGTGGCTCCACAGATGCTGGTGAGAATACTAGGCCAGAGGGAAAGGCT
CTTGTCAATGGTGTTAGAAAAACATGGGCTGATATGGTGGAAGAAGATGAACGTCAATTG
GGTGATGTCAGCTCAACGATCGGTATGGACACTACTAAGCGAAATGTAAGCTGCAAGCAT
GCAAATGAGGAGATGTATAGAACACCCTCATTCTCTCAAGAAAGCAGCGCCTTAAAAAGA
TCAAGCGTGGATGATCACCCACAGAGTTCTTCAGCGGATTCATGGAGACACAGTGACTCC
AAAATATCCACAGATGAGAACGTGAACATGAAGTTTGTCAGGACTGCTCCACAATGGAGA
CAGCAGAAGGTGCAAGATTACAGTAACCGAGTCTCCCAAAGGCTCGACACAAGCCATCTC
AGTGATAGAGCTGAAGGCACAGAGCAACCACCTTGGAGAAGCAGCACAGCTCAGCGTTCG
CTTTTTCCTGACTGGAAATCCAAGTGTGAAAGATATGGACATGGTTATGTGCCATTTGGT
GACAATGAACATTTTCAAGGTTCCAGTCACTTTGAGGCCACCAATCGTTGGCCTAAGAAT
GCGAGACCATGGAGGCCTCAGAACCGCCTCTGGGTCTTCCAAGAAATCACAAATGAGATC
AACCAAAAAGTAGTATAA

Peptide Sequence

PEP ID

Os08t0130300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:1711379:1715074:-1 gene:Os08g0130300 transcript:Os08t0130300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0130300-00)
Sequence

MPSGGRRLPPWTSPRGAAPRWSPCTPAGADGSGRAAHATPPASGGCSSHVTPPASGGGGC
YGYRVTPPTSGGCSRPPRAPLSSVDSPYVRAKQAQVIEKDPNKAVPLFWAAINSGDRIES
ALKDMATVLKQANRAEEAIEAIRSFRDRCPNEAQESLDNILLDLYKKCGRTKEQIEMLTL
KLRIVDEELASGRWKTKLSKSHGRVVYLSLRDEKARLLGNLAWAHMQSENYDEAEMLYRQ
ALAIEADYNKECNLAICLIKTGKVAEAKYLLQSIPDNCSDESHVRSLARAREMLMELESP
TLHSPITQMKSKESLIWLAIDAENLGHLQPQVSSTALTQLKSEEPHISVAADAEKQEDCN
SQVFPSPITQMKREEPESLIATSGENNEKCLNEYQDLSRLFNDAATPQSLLEKLRKRLVK
EDTLNISIQHQVQIPSFVECLPNSGGSTDAGENTRPEGKALVNGVRKTWADMVEEDERQL
GDVSSTIGMDTTKRNVSCKHANEEMYRTPSFSQESSALKRSSVDDHPQSSSADSWRHSDS
KISTDENVNMKFVRTAPQWRQQKVQDYSNRVSQRLDTSHLSDRAEGTEQPPWRSSTAQRS
LFPDWKSKCERYGHGYVPFGDNEHFQGSSHFEATNRWPKNARPWRPQNRLWVFQEITNEI
NQKVV

Transcript Sequence

Transcript ID

Os08t0130300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:1711379:1715074:-1 gene:Os08g0130300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0130300-00)
Sequence

GGATGGATTTTGATGGGGGGATTTTGGTGTCTGCGCGCCAGGTGTTCGACGGAATTCCGC
AATGCCGAGCGGAGGGAGGCGGCTGCCGCCGTGGACGTCGCCGAGGGGGGCGGCGCCGAG
GTGGAGCCCCTGCACGCCTGCGGGCGCGGACGGTTCGGGCCGCGCCGCCCACGCCACGCC
GCCGGCGAGCGGCGGGTGCTCCTCGCACGTGACGCCCCCGGCGAGCGGTGGTGGCGGGTG
TTACGGTTACCGTGTCACGCCGCCGACGAGCGGCGGGTGTTCCCGGCCTCCTAGGGCGCC
GCTGTCGTCGGTGGATTCGCCCTACGTGCGGGCGAAGCAGGCTCAGGTGATTGAAAAGGA
CCCAAACAAGGCAGTTCCATTGTTCTGGGCGGCTATAAACAGTGGTGATCGAATTGAGAG
CGCACTGAAGGATATGGCTACTGTACTGAAGCAAGCAAATCGAGCCGAAGAGGCTATTGA
GGCAATAAGATCCTTCCGTGATCGTTGCCCAAATGAAGCTCAGGAATCTCTTGACAATAT
TCTTCTTGACCTGTACAAGAAATGCGGCAGGACAAAAGAGCAGATTGAAATGCTGACATT
GAAGTTGAGAATTGTTGATGAGGAGCTAGCTTCTGGCAGGTGGAAAACCAAGTTGTCTAA
ATCTCATGGAAGAGTAGTTTATTTGTCTCTCAGGGATGAAAAAGCAAGGTTGTTGGGTAA
CCTTGCCTGGGCCCATATGCAGTCTGAAAATTATGATGAGGCCGAAATGCTCTACAGGCA
AGCTCTTGCTATAGAAGCTGATTATAACAAAGAGTGCAACTTAGCTATCTGCCTGATAAA
GACCGGAAAGGTAGCCGAAGCTAAATACCTTCTCCAATCTATACCTGACAACTGCAGTGA
TGAAAGCCATGTGAGGTCTCTTGCTCGGGCCAGAGAAATGCTTATGGAACTTGAGTCACC
AACACTCCATTCTCCCATAACTCAGATGAAATCTAAAGAATCATTAATCTGGCTTGCTAT
TGATGCGGAGAACCTTGGGCATTTACAGCCACAGGTATCCTCAACTGCTTTGACTCAACT
GAAATCTGAAGAACCACATATTTCAGTTGCTGCTGATGCAGAGAAGCAGGAGGATTGCAA
TTCACAAGTATTTCCATCTCCCATTACTCAGATGAAACGTGAAGAACCAGAAAGTTTGAT
TGCTACCAGTGGGGAGAATAATGAGAAATGCCTGAATGAATACCAAGATCTTTCTCGACT
GTTCAATGATGCTGCTACACCCCAGTCGTTGCTTGAGAAACTACGAAAACGGCTGGTGAA
AGAGGACACACTAAATATCAGCATACAGCACCAAGTTCAGATTCCTAGTTTTGTTGAATG
CTTGCCAAACTCTGGTGGCTCCACAGATGCTGGTGAGAATACTAGGCCAGAGGGAAAGGC
TCTTGTCAATGGTGTTAGAAAAACATGGGCTGATATGGTGGAAGAAGATGAACGTCAATT
GGGTGATGTCAGCTCAACGATCGGTATGGACACTACTAAGCGAAATGTAAGCTGCAAGCA
TGCAAATGAGGAGATGTATAGAACACCCTCATTCTCTCAAGAAAGCAGCGCCTTAAAAAG
ATCAAGCGTGGATGATCACCCACAGAGTTCTTCAGCGGATTCATGGAGACACAGTGACTC
CAAAATATCCACAGATGAGAACGTGAACATGAAGTTTGTCAGGACTGCTCCACAATGGAG
ACAGCAGAAGGTGCAAGATTACAGTAACCGAGTCTCCCAAAGGCTCGACACAAGCCATCT
CAGTGATAGAGCTGAAGGCACAGAGCAACCACCTTGGAGAAGCAGCACAGCTCAGCGTTC
GCTTTTTCCTGACTGGAAATCCAAGTGTGAAAGATATGGACATGGTTATGTGCCATTTGG
TGACAATGAACATTTTCAAGGTTCCAGTCACTTTGAGGCCACCAATCGTTGGCCTAAGAA
TGCGAGACCATGGAGGCCTCAGAACCGCCTCTGGGTCTTCCAAGAAATCACAAATGAGAT
CAACCAAAAAGTAGTATAAATACACATGTAATC