Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0130100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:1686254:1688804:-1 gene:Os08g0130100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsLSD3 description:Zinc finger, LSD1-type domain containing protein. (Os08t0130100-01)
Sequence	ATGCAGGACCAGCTGATCTGCAGCGGCTGCAGGCGCGTCGTCCAGTACAGGAGAGGGGTC GCCGGCGTCTGCTGCCCGGGCTGCAACACGCTCACCGCCGTCAACCCGTCAGCGGTGGCC GACATGTCGGAGCTCATCTGCAGCGGCTGCCCCACGCTGCTGTTCTACAACCGCGGCGCC TCCAACATCCGCTGCCCCAGCTGCAACAGGCTCAACTCCACCAGATCAGCCAACCAGATT GCACACCTGACATGCGGGCAGTGCCGGACGACTCTGATGCACCCACCTGGAGCCTCAACT GTGCAGTGTGCAACCTGCAGATATGTTAACCATGTCAGGGATGCTCGGCCTCAAACTGTC CTTGTAGAGAATCCTAAGACACTGGATGATAAGGGCAAGCTGGTGAGCAATGTGGTTGTT GGTGTCACCTCATGGAAAAGATGA

Peptide Sequence

PEP ID	Os08t0130100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:1686254:1688804:-1 gene:Os08g0130100 transcript:Os08t0130100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsLSD3 description:Zinc finger, LSD1-type domain containing protein. (Os08t0130100-01)
Sequence	MQDQLICSGCRRVVQYRRGVAGVCCPGCNTLTAVNPSAVADMSELICSGCPTLLFYNRGA SNIRCPSCNRLNSTRSANQIAHLTCGQCRTTLMHPPGASTVQCATCRYVNHVRDARPQTV LVENPKTLDDKGKLVSNVVVGVTSWKR

Transcript Sequence

Transcript ID	Os08t0130100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1686254:1688804:-1 gene:Os08g0130100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsLSD3 description:Zinc finger, LSD1-type domain containing protein. (Os08t0130100-01)
Sequence	ACCGTGGAGCACTCGATCTCCAAGCTCATCTAGCTCTTCTTGCTTCAGCTTCTTCCTCTC TCTCACAGTTCATCACACTTGGCTTTTTGAGTCAGGTGCTTGTTCTTCCTGCTGTTCTTG CCTTGGCATATGCAGGACCAGCTGATCTGCAGCGGCTGCAGGCGCGTCGTCCAGTACAGG AGAGGGGTCGCCGGCGTCTGCTGCCCGGGCTGCAACACGCTCACCGCCGTCAACCCGTCA GCGGTGGCCGACATGTCGGAGCTCATCTGCAGCGGCTGCCCCACGCTGCTGTTCTACAAC CGCGGCGCCTCCAACATCCGCTGCCCCAGCTGCAACAGGCTCAACTCCACCAGATCAGCC AACCAGATTGCACACCTGACATGCGGGCAGTGCCGGACGACTCTGATGCACCCACCTGGA GCCTCAACTGTGCAGTGTGCAACCTGCAGATATGTTAACCATGTCAGGGATGCTCGGCCT CAAACTGTCCTTGTAGAGAATCCTAAGACACTGGATGATAAGGGCAAGCTGGTGAGCAAT GTGGTTGTTGGTGTCACCTCATGGAAAAGATGATGAACAGGGGCTCATCTAGGGTTTAAT CCCAAGGGTCTATGGATGATTGATACCCTTGGTGGATTTGTATCATTACTACAAAGCTAT TGTTAAATCAAGTGTGTTTTGAAGCTTGATATAAACAAGAGAAAAACAATAGGGCAAAAA ATGAAGAAAAAAATATATCCGAAATGTGCCATGTTTGTGCTTCTTTTGTGAGAAAAAAAA ATGTAAATATGCTGGCTATGGTGCTAGCCTATGTGCTTTTTAGCAAAAAGGAATGGAAAT GAGATGAGCAGCATTGTGTCCTG