Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0129500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:1649042:1652609:-1 gene:Os08g0129500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0129500-01)
Sequence

ATGGCCGCGTCGTCGCCGGCATCCAGCGGGAAGGCGGCCAGCGACTCGTCGGCACCCGCG
GTCGCGGTCGCCAACGGCAATGGGACGACGCCGCAGAAGCTGCCCCCGGCGTCCGCCTTC
GACATGCCCAAGCCCAACCTGCGCGGCCTCAACAAGCCCAAGTGCATCCAGTGCGGCAAC
GTTGCGCGCTCGCGGTGCCCGTTCCAGTGTTGTAAGAGCTGCTGCTACAAGGCTCAGAAT
CCTTGCCACATTCATGTTCTGAAACAGAACAACACATTGCCAGATAAGCCACCTCTGTCA
ACAGCTCCTCTGTCAGAGCAACCATCAGCTAATATACCTTCAACCGGTTCATCAAGGTTG
GCTTCTCTGCAAAGGCTTCCCCATCATTTCCTGAATTCCCTCCGAACAAAGAAGTCCCTT
GCCAAAAAGGATGTTATGGGCATAAACAAGTGGAGGTTTGAGAAGCTAAAAGAACATATC
CAAGGAGACATCGATGCTGAAAATGAAGCGTATGAAAGGTATACACAGAATGTTGGGTTA
CTGGAGGAAACGTTCGGTCTTACAGAAGATGCTGCTGATGAACCTGAACCTGAAGCAACT
TCTTCAGAAGAGAGGATGGAAACATTGGTTTCCGAGGCAAAGGTGAGGCTGAAATCGGAC
TCTGCAAATGCAGATGGCTTCCGGGACAGGATTGCTACTATTTTGGACCAGAAGATAAAG
GAATTGCTAGAAAGCAAAAGCACCTACGAGGATGACAACCCTCCTGACCAAAATCCAGAT
GACCATCCAAAGCCTGTCAAGTTATCCATCAAGCAGCAAATGGAGAGAGGTGCAAAGATG
ACTGAGCTCCTTGCTAAGATGATAAGAGCACAGAGTGAGGTTGATCTGAAGATCTGCTCT
GGTATTGCGGCGCAGCTGTTTGGAAAGAAGAATGAATTGAGCAACCAAGAATCTGTTGCA
TCTGTTACGATTCCTTATTCTTTTCCAAAGCTCTGGACTAGGGTGGAGATTGATGATGCC
ATGATGTGTAAGATCAACGGCGAATTTTCGTCTTCGACAGAGGTAATGCAGCTATAA

Peptide Sequence

PEP ID

Os08t0129500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:1649042:1652609:-1 gene:Os08g0129500 transcript:Os08t0129500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0129500-01)
Sequence

MAASSPASSGKAASDSSAPAVAVANGNGTTPQKLPPASAFDMPKPNLRGLNKPKCIQCGN
VARSRCPFQCCKSCCYKAQNPCHIHVLKQNNTLPDKPPLSTAPLSEQPSANIPSTGSSRL
ASLQRLPHHFLNSLRTKKSLAKKDVMGINKWRFEKLKEHIQGDIDAENEAYERYTQNVGL
LEETFGLTEDAADEPEPEATSSEERMETLVSEAKVRLKSDSANADGFRDRIATILDQKIK
ELLESKSTYEDDNPPDQNPDDHPKPVKLSIKQQMERGAKMTELLAKMIRAQSEVDLKICS
GIAAQLFGKKNELSNQESVASVTIPYSFPKLWTRVEIDDAMMCKINGEFSSSTEVMQL

Transcript Sequence

Transcript ID

Os08t0129500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:1649042:1652609:-1 gene:Os08g0129500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0129500-01)
Sequence

AGGAGAGACACAAAAGAAAAAAAAAAGAAGAAACCCTAGCTCGCCGGAGCACCGCCGCCG
TCGAGGCCTCCGGTTCCCCGGAATCCCAACCGCTGGTCCTGTGCGGAGTTGCGGGGTGGT
TCACGGCGGGTTCGCTATGGCCGCGTCGTCGCCGGCATCCAGCGGGAAGGCGGCCAGCGA
CTCGTCGGCACCCGCGGTCGCGGTCGCCAACGGCAATGGGACGACGCCGCAGAAGCTGCC
CCCGGCGTCCGCCTTCGACATGCCCAAGCCCAACCTGCGCGGCCTCAACAAGCCCAAGTG
CATCCAGTGCGGCAACGTTGCGCGCTCGCGGTGCCCGTTCCAGTGTTGTAAGAGCTGCTG
CTACAAGGCTCAGAATCCTTGCCACATTCATGTTCTGAAACAGAACAACACATTGCCAGA
TAAGCCACCTCTGTCAACAGCTCCTCTGTCAGAGCAACCATCAGCTAATATACCTTCAAC
CGGTTCATCAAGGTTGGCTTCTCTGCAAAGGCTTCCCCATCATTTCCTGAATTCCCTCCG
AACAAAGAAGTCCCTTGCCAAAAAGGATGTTATGGGCATAAACAAGTGGAGGTTTGAGAA
GCTAAAAGAACATATCCAAGGAGACATCGATGCTGAAAATGAAGCGTATGAAAGGTATAC
ACAGAATGTTGGGTTACTGGAGGAAACGTTCGGTCTTACAGAAGATGCTGCTGATGAACC
TGAACCTGAAGCAACTTCTTCAGAAGAGAGGATGGAAACATTGGTTTCCGAGGCAAAGGT
GAGGCTGAAATCGGACTCTGCAAATGCAGATGGCTTCCGGGACAGGATTGCTACTATTTT
GGACCAGAAGATAAAGGAATTGCTAGAAAGCAAAAGCACCTACGAGGATGACAACCCTCC
TGACCAAAATCCAGATGACCATCCAAAGCCTGTCAAGTTATCCATCAAGCAGCAAATGGA
GAGAGGTGCAAAGATGACTGAGCTCCTTGCTAAGATGATAAGAGCACAGAGTGAGGTTGA
TCTGAAGATCTGCTCTGGTATTGCGGCGCAGCTGTTTGGAAAGAAGAATGAATTGAGCAA
CCAAGAATCTGTTGCATCTGTTACGATTCCTTATTCTTTTCCAAAGCTCTGGACTAGGGT
GGAGATTGATGATGCCATGATGTGTAAGATCAACGGCGAATTTTCGTCTTCGACAGAGGT
AATGCAGCTATAAACCTGGAATTAATCTGTTCAGACCCAATGCTTGTCTACACTAGAAGA
ACATGGTTGAACCACAGCTTCTTTTCTGCTTAACCTACTGTTCGTTTAATGTAAGCAATT
GTAATTGTTTTCATCAGAGACAAAAACCATGAGAGCAACACAGTAGTTTGACCAGTTTGT
ATTAAACCATGACATGAGAGCAATACAGTAGTATAGTTGTTTTT