Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0128200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:1606299:1609517:1 gene:Os08g0128200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3537 domain containing protein. (Os08t0128200-01)
Sequence	ATGGCGCCCAGCAACCGCCTCGCCGGAGCTGCGGCGGCGGCGGCGGCGGCGCCTCCTCCT CCTCCTCCTCCTCCGCCGCCTCCTCTACCTCCGAGAGGATCTCCCGCGCCGTCGGAGAAC CATACAGCGATCTCGGCGCCTCTGCTGCAGCCCGCGGGGGCGGGCGCGGGCGACGCGGCG CCGCTGGCGAAGTGGCTGCGGCGGCTCGAGGCGTTCCTCTCGGCGGCGGGGCTCGCGGCG TCGAGCCCGCTCGGGAAGGCCGGGGCGGCGTCCGCGCTCGCCGTGCTGGGCGTCGCGCTG CCGGCGCTGGCGGTGGCGCTCTCCCCGTGCCGCGGGCGCGGGAGGGGTTGCGACGAGTTC GAGGTGGAGGTGTTCGAGGTGTGCGTGCTTCTGTCGCAGGCGGCGGCCGCGGCCGTCGCG CTCGCGTGCGTGTCGAGGAAGATGGCCATGTACGGCCTCCGCAAGTTCCTCTTCGTCGAC CCGGAGCTCGGCATGCGGATCCGCTTCCAGAAGGAGTACGTCGCTAAGATCAAGGATTTC TTCAGCACAATTTTGTGGTGGATATTGCCATGCTTTGTTGTGAAGGTCACACGAGAAATG TTCCGTTTCTCCCATATCTTCCAAGAGTCGACTTGGAGATCATGTGCTGTACTGTTTGCT TCCATCATGTCATGGATGTATCTGACCACAATTATATTAACCTCCTGCATGCTTTTCAAC TTGGTTTGCAACCTACAAGTTATTCATTTCGATGACTATGGAAAACTTCTAGAACAAGAT TCAGATCCTTTGGTCTATTTAAAAGAGCACCTGCAGCTTCGTCATAATCTCTCCAAAATC AGTCACAGGTTCCGCATGTTCCTTTTGCTGCTCTTCTTTTCTGTTACAGCAAGCCAGTTT GCCATTCTGTTCAAGACAACAGCATATACTGGACCAATCAATTTCACTAATGGTGGTGAT ATAGCTGTCTCTTCCGTTGTTCAAGTTGTCGGTCTTGTCCTTTGTTTGCATGCAGCTGCT AAAATTTCTCACAGAGCTCAAAACATTGCTTCACTGGCTAGTCGATGGCATGCCTTAGTA ACATGCTCTAGTGATTCTACTTATGTAAGCACACCAAACAGTTCTGGGAACCTTGTGCCT TTTCCAGCACATATGTTCTTGAGAGACTTTTCAGAAAGTGATTTGGAGTCTCTGGAGAGT GGCTCAGTACAAGGCAATTCTCATGGCACAGCTCAATTGGCTTCATACATGTCTTCATAC CACAAGAGGGAATCACTTGTGCTGTATCTTCTGGGCAACCCAGGTGGCATCACGATATTT GGCTGGATCGTTGATCGGACATTCCTAAATACAATTCTGATGCTCGAATTAACACTTGTG CTCTTCGTGCTTAGCAAGACCGTTGTGGTTCCGGCCAAAACATTAGTTCTTGATTACATC AGGTTTCCATGA

Peptide Sequence

PEP ID	Os08t0128200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:1606299:1609517:1 gene:Os08g0128200 transcript:Os08t0128200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3537 domain containing protein. (Os08t0128200-01)
Sequence	MAPSNRLAGAAAAAAAAPPPPPPPPPPPLPPRGSPAPSENHTAISAPLLQPAGAGAGDAA PLAKWLRRLEAFLSAAGLAASSPLGKAGAASALAVLGVALPALAVALSPCRGRGRGCDEF EVEVFEVCVLLSQAAAAAVALACVSRKMAMYGLRKFLFVDPELGMRIRFQKEYVAKIKDF FSTILWWILPCFVVKVTREMFRFSHIFQESTWRSCAVLFASIMSWMYLTTIILTSCMLFN LVCNLQVIHFDDYGKLLEQDSDPLVYLKEHLQLRHNLSKISHRFRMFLLLLFFSVTASQF AILFKTTAYTGPINFTNGGDIAVSSVVQVVGLVLCLHAAAKISHRAQNIASLASRWHALV TCSSDSTYVSTPNSSGNLVPFPAHMFLRDFSESDLESLESGSVQGNSHGTAQLASYMSSY HKRESLVLYLLGNPGGITIFGWIVDRTFLNTILMLELTLVLFVLSKTVVVPAKTLVLDYI RFP

Transcript Sequence

Transcript ID	Os08t0128200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1606299:1609517:1 gene:Os08g0128200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3537 domain containing protein. (Os08t0128200-01)
Sequence	ACCCTTTCCCGCCCTCATGGCGCCCAGCAACCGCCTCGCCGGAGCTGCGGCGGCGGCGGC GGCGGCGCCTCCTCCTCCTCCTCCTCCTCCGCCGCCTCCTCTACCTCCGAGAGGATCTCC CGCGCCGTCGGAGAACCATACAGCGATCTCGGCGCCTCTGCTGCAGCCCGCGGGGGCGGG CGCGGGCGACGCGGCGCCGCTGGCGAAGTGGCTGCGGCGGCTCGAGGCGTTCCTCTCGGC GGCGGGGCTCGCGGCGTCGAGCCCGCTCGGGAAGGCCGGGGCGGCGTCCGCGCTCGCCGT GCTGGGCGTCGCGCTGCCGGCGCTGGCGGTGGCGCTCTCCCCGTGCCGCGGGCGCGGGAG GGGTTGCGACGAGTTCGAGGTGGAGGTGTTCGAGGTGTGCGTGCTTCTGTCGCAGGCGGC GGCCGCGGCCGTCGCGCTCGCGTGCGTGTCGAGGAAGATGGCCATGTACGGCCTCCGCAA GTTCCTCTTCGTCGACCCGGAGCTCGGCATGCGGATCCGCTTCCAGAAGGAGTACGTCGC TAAGATCAAGGATTTCTTCAGCACAATTTTGTGGTGGATATTGCCATGCTTTGTTGTGAA GGTCACACGAGAAATGTTCCGTTTCTCCCATATCTTCCAAGAGTCGACTTGGAGATCATG TGCTGTACTGTTTGCTTCCATCATGTCATGGATGTATCTGACCACAATTATATTAACCTC CTGCATGCTTTTCAACTTGGTTTGCAACCTACAAGTTATTCATTTCGATGACTATGGAAA ACTTCTAGAACAAGATTCAGATCCTTTGGTCTATTTAAAAGAGCACCTGCAGCTTCGTCA TAATCTCTCCAAAATCAGTCACAGGTTCCGCATGTTCCTTTTGCTGCTCTTCTTTTCTGT TACAGCAAGCCAGTTTGCCATTCTGTTCAAGACAACAGCATATACTGGACCAATCAATTT CACTAATGGTGGTGATATAGCTGTCTCTTCCGTTGTTCAAGTTGTCGGTCTTGTCCTTTG TTTGCATGCAGCTGCTAAAATTTCTCACAGAGCTCAAAACATTGCTTCACTGGCTAGTCG ATGGCATGCCTTAGTAACATGCTCTAGTGATTCTACTTATGTAAGCACACCAAACAGTTC TGGGAACCTTGTGCCTTTTCCAGCACATATGTTCTTGAGAGACTTTTCAGAAAGTGATTT GGAGTCTCTGGAGAGTGGCTCAGTACAAGGCAATTCTCATGGCACAGCTCAATTGGCTTC ATACATGTCTTCATACCACAAGAGGGAATCACTTGTGCTGTATCTTCTGGGCAACCCAGG TGGCATCACGATATTTGGCTGGATCGTTGATCGGACATTCCTAAATACAATTCTGATGCT CGAATTAACACTTGTGCTCTTCGTGCTTAGCAAGACCGTTGTGGTTCCGGCCAAAACATT AGTTCTTGATTACATCAGGTTTCCATGATGGGGGCTATCACATCTCAAACATCTGAATTT GGTCCGGATCGCTAGATATGGTGAATTGAGGATACACATCAGGCTCCTATTGCCACCATG CCAGAATCCGATCTGGTGGACAGAAAATCTGATCTTCTGAGGATTAAAATCATCTGCTGG ATCTGAGAACTACAAGGTTGGTCTCTCTTGAGGATTTCCTGATGAACACCCTGTTTTGCC GCTAATCCACGTCATGCCAATTTTCCATGAGAAACAGAGAGAACATCATGTAATTTTGAA CAGTTGATCACTGAAACTCCACTCTAGGCTGTGCGCTGTGCATAGAGCCAGCTTCATCCA TGTAAATTGCTGTAGGCTTCTCCTGTCTTTTTTGTTGTGCATATTAAGATTTAAAATTTA GGGGTATAGACCACATGATCGATACTACAACTGAATCTAAAGTTTTCGTTTATGGTTGAG TGGATTGTTCAGATGC