Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0127700-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:1585191:1588896:1 gene:Os08g0127700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pre-mRNA-splicing factor SLU7. (Os08t0127700-01);Similar to Pre-mRNA-splicing factor SLU7. (Os08t0127700-02)
Sequence	ATGGCGACCGCTTCGGTGTCGTTTAAGTCTAGAGAGGATCACCGGAAGCAGCTCGAGCTC GAGGAGGCGAGGAAGGCTGGGCTCGCGCCCGCCGAGGTCGACGAGGATGGAAAGGAGATC AATCCCCATATCCCCCAGTACATGTCCTCAGCCCCATGGTATCTTAACGCTGATAAGCCG AGTTTGAAGCATCAACGGAATTGGAAATCGGACCCGAACTACACCAAGTCATGGTACGAT AGGGGTGCTAAGCTTTTTCAGGCTAACAAGTACAGGAAAGGAGCTTGTGAGAACTGTGGA GCCATGACTCATGACAAGAAGTCATGCATGGAACGACCTCGCAGTGTGGGAGCTAAATGG ACTAACATCAATATAGCACCAGATGAGAAAGTGGAGTCATTTGAACTGGATTATGATGGA AAGCGTGATCGCTGGAACGGTTACGACCCATCGACGTACACCCGTGTTATTGCAGATTAT GAAGCTAGAGAAGAGGCTAGGAAAAAGTATCTGAAAGAGCAACAGCTCAAGAAACTTGAG GAGAAGGATGGTGAGGAGGGTGACGAGAACGTGGCTAGTGAGGAGGAGGATGAAGAAGAT GGTTTGAAGATAGATGAGGCTAAAGTTGATGAGAGTGCTCAAATGGATTTTGCTAAGGTA GAGAAGCGTGTACGTACAACAGGTGGTGGAAGCACTGGAACTGTGAGGAATTTGCGTATT AGGGAAGACACTGCAAAGTATCTTCTGAACCTTGATGTGAACTCTGCATACTATGATCCA AAAACCCGCTCCATGCGTGAAGATCCATTGCCAGATGCAGACCCCAATGATAAATTCTAT GTGGGTGATAACCAAAATCGACTTAGCGGACAAGCTCTGGAGTTCAAGCAACTCAACATA CATGCGTGGGAAGCTTTTGATAAGGGACAGGATATTCACATGCAAGCTGCCCCATCTCAA GCTGAACTTCTATTCAAGAGTTTTAAGATCAAAAAGGAGAAATTGAAATCTGAAAACAAA GATAAGATTATGGAGAAGTATGGGAATGCTGCATCTGAAGAACCAATCCCTCGGGAGCTT CTTCTTGGACAAAGTGAAAAAGAGATTGAATATGACCGAACTGGTCGAATAATCAAAGGA CAGGATGTAGCCCTTCCCAAGAGCAAATATGAAGAGGATGTTTTCATTAATAACCATACA ACCGTATGGGGCTCATGGTGGAAAGATCATCAGTGGGGCTACAAATGCTGCAAGCAGACT ATCCGAAATAGCTACTGCACTGGCTTAGCTGGAATTGAGGCTGCTGAAGCATCGGCTGAT TTGATGAAGGCAAATATGGCCCGCAAGGAAGCTGCAGAAGATGAGCCTGTACGACATGAA GAAAAGCGACTGGCCACCTGGGGAACTGATGTGCCTAATGATATTGTTCTTGACAAGAAG CTGCTTGATGAAGCCCTAAAGAAGGAGGGTGCGAGGAGGAAAGAGGAGATGGATGAAAGG AAGAGGAAGTACAATGTGAAATGGAATGATGAGGTCACCGCGGAAGACATGGAGGCTTAC CGCATGAAGAGAATTCACCATGATGATCCTATGAGGGATTTCCTCCATTAG

Peptide Sequence

PEP ID	Os08t0127700-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:1585191:1588896:1 gene:Os08g0127700 transcript:Os08t0127700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pre-mRNA-splicing factor SLU7. (Os08t0127700-01);Similar to Pre-mRNA-splicing factor SLU7. (Os08t0127700-02)
Sequence	MATASVSFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNADKP SLKHQRNWKSDPNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKW TNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKYLKEQQLKKLE EKDGEEGDENVASEEEDEEDGLKIDEAKVDESAQMDFAKVEKRVRTTGGGSTGTVRNLRI REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFYVGDNQNRLSGQALEFKQLNI HAWEAFDKGQDIHMQAAPSQAELLFKSFKIKKEKLKSENKDKIMEKYGNAASEEPIPREL LLGQSEKEIEYDRTGRIIKGQDVALPKSKYEEDVFINNHTTVWGSWWKDHQWGYKCCKQT IRNSYCTGLAGIEAAEASADLMKANMARKEAAEDEPVRHEEKRLATWGTDVPNDIVLDKK LLDEALKKEGARRKEEMDERKRKYNVKWNDEVTAEDMEAYRMKRIHHDDPMRDFLH

Transcript Sequence

Transcript ID	Os08t0127700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1585191:1588896:1 gene:Os08g0127700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pre-mRNA-splicing factor SLU7. (Os08t0127700-01);Similar to Pre-mRNA-splicing factor SLU7. (Os08t0127700-02)
Sequence	AGTTCGCCGACTTTTCGCCGCCGCGTCGCGCTCCCCCGAGGTCCACTCCTCTCCTGCCGG AGAAGCGGGCCTAGGCGAAGAGCAGCGCCATGGCGACCGCTTCGGTGTCGTTTAAGTCTA GAGAGGATCACCGGAAGCAGCTCGAGCTCGAGGAGGCGAGGAAGGCTGGGCTCGCGCCCG CCGAGGTCGACGAGGATGGAAAGGAGATCAATCCCCATATCCCCCAGTACATGTCCTCAG CCCCATGGTATCTTAACGCTGATAAGCCGAGTTTGAAGCATCAACGGAATTGGAAATCGG ACCCGAACTACACCAAGTCATGGTACGATAGGGGTGCTAAGCTTTTTCAGGCTAACAAGT ACAGGAAAGGAGCTTGTGAGAACTGTGGAGCCATGACTCATGACAAGAAGTCATGCATGG AACGACCTCGCAGTGTGGGAGCTAAATGGACTAACATCAATATAGCACCAGATGAGAAAG TGGAGTCATTTGAACTGGATTATGATGGAAAGCGTGATCGCTGGAACGGTTACGACCCAT CGACGTACACCCGTGTTATTGCAGATTATGAAGCTAGAGAAGAGGCTAGGAAAAAGTATC TGAAAGAGCAACAGCTCAAGAAACTTGAGGAGAAGGATGGTGAGGAGGGTGACGAGAACG TGGCTAGTGAGGAGGAGGATGAAGAAGATGGTTTGAAGATAGATGAGGCTAAAGTTGATG AGAGTGCTCAAATGGATTTTGCTAAGGTAGAGAAGCGTGTACGTACAACAGGTGGTGGAA GCACTGGAACTGTGAGGAATTTGCGTATTAGGGAAGACACTGCAAAGTATCTTCTGAACC TTGATGTGAACTCTGCATACTATGATCCAAAAACCCGCTCCATGCGTGAAGATCCATTGC CAGATGCAGACCCCAATGATAAATTCTATGTGGGTGATAACCAAAATCGACTTAGCGGAC AAGCTCTGGAGTTCAAGCAACTCAACATACATGCGTGGGAAGCTTTTGATAAGGGACAGG ATATTCACATGCAAGCTGCCCCATCTCAAGCTGAACTTCTATTCAAGAGTTTTAAGATCA AAAAGGAGAAATTGAAATCTGAAAACAAAGATAAGATTATGGAGAAGTATGGGAATGCTG CATCTGAAGAACCAATCCCTCGGGAGCTTCTTCTTGGACAAAGTGAAAAAGAGATTGAAT ATGACCGAACTGGTCGAATAATCAAAGGACAGGATGTAGCCCTTCCCAAGAGCAAATATG AAGAGGATGTTTTCATTAATAACCATACAACCGTATGGGGCTCATGGTGGAAAGATCATC AGTGGGGCTACAAATGCTGCAAGCAGACTATCCGAAATAGCTACTGCACTGGCTTAGCTG GAATTGAGGCTGCTGAAGCATCGGCTGATTTGATGAAGGCAAATATGGCCCGCAAGGAAG CTGCAGAAGATGAGCCTGTACGACATGAAGAAAAGCGACTGGCCACCTGGGGAACTGATG TGCCTAATGATATTGTTCTTGACAAGAAGCTGCTTGATGAAGCCCTAAAGAAGGAGGGTG CGAGGAGGAAAGAGGAGATGGATGAAAGGAAGAGGAAGTACAATGTGAAATGGAATGATG AGGTCACCGCGGAAGACATGGAGGCTTACCGCATGAAGAGAATTCACCATGATGATCCTA TGAGGGATTTCCTCCATTAGGCCTTGTATGCTCCATAGTTGCTCATATATGAGCACAACA CTCTGCCTTGCAGTGTCACTTGTGTAATGTATTAGCTGTGGCTATGTCTTCCTCTAACTG GAGTGATAATTTAGAGCTAAGAGCTCTCTACTTCTCTTCCAGATGTTACCATCCTCTTGT CCGGATGGTTGTGTTTGTATTGCTGATCTTTCTATAAATGATATGGAAAAAAGGAGTTGC ATACTTGC