Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0127500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:1578268:1580227:1 gene:Os08g0127500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os08t0127500-01)
Sequence

ATGGGGGACAACGCCTCCGCCTCCGCCTCCGTGCTGGCGCCGCCGGTGGGAGCGGGTGAG
GGTGACGCGCCGTCGTTCTCCTACCTCGCCGCGCTCGGCAACTGCCCGCTCGTCGCCGCC
GTCCTCGCCGGCGCCATCGCGCAGTTCATCAAGGTGTTGACCACATGGTACAAGGAGAAT
CGGTGGGACGCGAAGCAGCTGGTGGGGTCCGGCGGGATGCCGTCGTCGCACTCGGCCACC
GTCGTCGCGCTCGCCGTCGCCGTCGGCCTCCAGGAAGGGTTCGGCAGCTCGCTCTTCGCC
ACCGCCGCCATCTTCGCGTCCGTGGTTATGTATGATGCTTTTGGTGTCAGGCTACATGCA
GGGAAGCAAGCAGAGGTCTTGAATCAAATTGTGTATGAACTCCCATCGGAGCATCCACTG
GCTGAAACAAGACCACTCCGAGAACTCCTTGGACACACACCAGCTCAGGTTTTTGCTGGT
GGGGTGCTTGGATTTGCAGTGGCCACATTTACAGGCATGATAGCTGGGCTTGGTAACACT
GGTTCATTGCCCTGA

Peptide Sequence

PEP ID

Os08t0127500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:1578268:1580227:1 gene:Os08g0127500 transcript:Os08t0127500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os08t0127500-01)
Sequence

MGDNASASASVLAPPVGAGEGDAPSFSYLAALGNCPLVAAVLAGAIAQFIKVLTTWYKEN
RWDAKQLVGSGGMPSSHSATVVALAVAVGLQEGFGSSLFATAAIFASVVMYDAFGVRLHA
GKQAEVLNQIVYELPSEHPLAETRPLRELLGHTPAQVFAGGVLGFAVATFTGMIAGLGNT
GSLP

Transcript Sequence

Transcript ID

Os08t0127500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:1578268:1580227:1 gene:Os08g0127500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os08t0127500-01)
Sequence

GCCGACGAGTGGCCGCCGCTCGCCTCCCCTCCCCGCACCGCGCCGGGCGCCAGATCTTCC
AGAAGCTTCTAGAACCCGCCCGCTCCATCCAATGGGGGACAACGCCTCCGCCTCCGCCTC
CGTGCTGGCGCCGCCGGTGGGAGCGGGTGAGGGTGACGCGCCGTCGTTCTCCTACCTCGC
CGCGCTCGGCAACTGCCCGCTCGTCGCCGCCGTCCTCGCCGGCGCCATCGCGCAGTTCAT
CAAGGTGTTGACCACATGGTACAAGGAGAATCGGTGGGACGCGAAGCAGCTGGTGGGGTC
CGGCGGGATGCCGTCGTCGCACTCGGCCACCGTCGTCGCGCTCGCCGTCGCCGTCGGCCT
CCAGGAAGGGTTCGGCAGCTCGCTCTTCGCCACCGCCGCCATCTTCGCGTCCGTGGTTAT
GTATGATGCTTTTGGTGTCAGGCTACATGCAGGGAAGCAAGCAGAGGTCTTGAATCAAAT
TGTGTATGAACTCCCATCGGAGCATCCACTGGCTGAAACAAGACCACTCCGAGAACTCCT
TGGACACACACCAGCTCAGGTTTTTGCTGGTGGGGTGCTTGGATTTGCAGTGGCCACATT
TACAGGCATGATAGCTGGGCTTGGTAACACTGGTTCATTGCCCTGACTGCCGGATTGGCG
ATATTTGTAGCTTCACGCCAAATTTGTTGAAGTGTTAGAATCCAAATCGGTTATGCGTTT
TCGGGTCGCGTACAGGAGTATGTAAAGTTTTTTTTTTCTTTTGTGGAATTCGTAAGCCAA
TCTCATGTGAGAAAGAAAACTCATGTCATTCTTTTGTAGCTAAGAAATAATCAGCTTATT
TGTATTC