Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0126700-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:1536955:1540289:1 gene:Os08g0126700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0126700-01);RNA recognition motif domain domain containing protein. (Os08t0126700-02)
Sequence	TGGTGGGTGGCAATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGG GTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAG GACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGAT ACTAAAGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCT CCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAG CTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCC GCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCG CCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAGTTCGCGCCTCCCGGGCTCGTCGTC GACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAAC AACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGT GGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCC TGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCAC CAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAG CCAGGCGGCGTGACGCCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTC AACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAG TACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCC GGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCG CACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGT GGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATAC CTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAG TACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTC AGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATC TGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACG TGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGAT CAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAG AAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCC ATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCT CTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCA CTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGAC CATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCT GGAAACAGCATATCCACAATTATATAG

Peptide Sequence

PEP ID	Os08t0126700-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:1536955:1540289:1 gene:Os08g0126700 transcript:Os08t0126700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0126700-01);RNA recognition motif domain domain containing protein. (Os08t0126700-02)
Sequence	WWVAMEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIED TKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPA AAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVVDASAEGPYPLRGGQHVLDDN NFGGGYYYPAGEDAFPNGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHH QVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEK YGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRG GGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFV SFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFD QELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHS LQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPA GNSISTII

Transcript Sequence

Transcript ID	Os08t0126700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1536955:1540289:1 gene:Os08g0126700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0126700-01);RNA recognition motif domain domain containing protein. (Os08t0126700-02)
Sequence	GTGGTGGGTGGCAATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAG GGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGA GGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGA TACTAAAGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACC TCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCA GCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGC CGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTC GCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAGTTCGCGCCTCCCGGGCTCGTCGT CGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAA CAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGG TGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCC CTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCA CCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCA GCCAGGCGGCGTGACGCCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCT CAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAA GTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGC CGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCC GCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGG TGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATA CCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCA GTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGT CAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCAT CTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGAC GTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGA TCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGA GAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATC CATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTC TCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCC ACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGA CCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGC TGGAAACAGCATATCCACAATTATATAGGAGGAAAAAAATTACAAAGAGACTTTTGGGCC TTGGGTTCGGAATTCAGGTGCCCCTTTAGGCATTTGATGGTAATTTGGTCCAAGAGTAAC ATAAGTATACACACACAGGAGGAGACAACAAAAAGCAACAATATTTTTGTTGTAGATAGA GAAGGAAGGCAGAAGAAAATCTCACTGGTCATAATTAGGAGGCACATCTTTTTTGAAAAA AAATAATTAGGAGGCACATAAACACATGGTGTTCATTTTATACTTTAGAAGAGGACAGAA ACAACAGCTTACAAAAGAATCTCACATGGTGCAGTAGCTAGCTTGCAAGAGGTAAGGACA GTTACAAAAGAATTACAATGGTGGAAACTTGAGATATAGATGTGCAGTTTGACTATAATT AAGGAATAGGGGACAATGTGATATGCTAATTATACTGTCCTAGAATAAGGCATGTTATTA TTTACATATTTAGTGTTATCTTCTTTTTTTTAGGGTATAATGGCCTACTGGCCTTTACCT TTACAAGGGTGAAAAAAAAAAGCAGAACCTTTGCTGATATTCCTATTGACAAGATGAGCA GAGCGTGCCCATTTGTACTTATCATCAGTAATGGAGAAAATTGCCTTCGATGTTTATTTC CTGCTTTCTGT