Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0121900-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:1197186:1200087:-1 gene:Os08g0121900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF23 family protein. (Os08t0121900-01);Similar to predicted protein. (Os08t0121900-02)
Sequence	CCGGCGCTCGTGGATCGATCTGAGCGAGAGGGGAGCTGCTGGAGACAGTGGTGCGTGCGT CCGTCGGCCACCCTGAACGCCGTGTCGTCGGAGCGCGGCGCGCAGCAAGCCGGCATGGTC AGCGTCGACGCCGTGTTGCCTTCTGTTCATATCCAGCACGCGGTTGCCTTGCCGGACCAT GTTCTCCTGATGCTCAGAGATGGCTCATTGCTGCCGGCTTCGGGGCAATTTGAGTGCCTG TACTCCCCTGTCAACTCGTCGCAGCTGCGTCGCCAGCCCTTGTCCGTCGCTACCTTGCCG GATGGACCCAGCCTCGTCCATTGTCCCGCCGGACCATCCAGGGTCGCTGTGTCCCTCTCA CTGGCGCAGTCGGTTCCGGTGGCGCCGTTGCAATGGGATCGGCTGGTGTACACTGCACTT ATTGACAGCAAGGACAACTCCACCGTTGTGTTTGCAAAGGGGATGAACCTCCGTCCGGGT CGTCTAGGTGTGCCATCACGGTACGAGTGTGTCTTTGGCCGAGACTTTTCGAAGCCAAAG CTTGTTGTCACCTCCCCAGTGGTTTCTGCTGCTCAGGAGATATTCCGGTGTGTGACACCA GTTCGCATTCGCCGGTACCTCCGGATGACTACCGGTGGCAAAAACAGCGTAAACAATGAT GACAAGCCTATGTTGGTCTCCATCAGGACTAAGGGCCGGGGAAGCTCTACACTCCCCTCA ATCGCGCAACCGGAGCCGCTTCCTCGGTACAACAAGCATTGGAGACGAAAGGCACACTCA ATGTGTGTCTGCACCATGCTTCGCAACCAAGCACGGTTCCTGCGGGAATGGATCATCTAT CACTCACGTATTGGTGTGCAGCGGTGGTTCATCTATGACAACAACAGCGACGATGGCATT GAGGAGGTCCTCAACACCATGGATTCATCCAGGTACAATGTGACACGCTATTTATGGCCA TGGATGAAATCTCAGGAGGCTGGATTTGCACATTGTGCACTCAGGGCTCGAGAGAGCTGT GAGTGGGTGGGGTTCATTGACATAGATGAGTTCCTGCACTTCCCTGGCAACCAAACACTA CAAGATGTCCTCCGAAATTACTCTGTCAAGCCACGGATCGGTGAGCTCAGGACTGCATGC CATAGTTTTGGTCCATCAGGCCGGACTAAGATCCCAAAGAAAGGTGTTACAACAGGCTAC ACCTGCCGGCTGGCTGCACCTGAGCGCCATAAGTCAATTGTCAGGCCAGACGCATTGAAC CCATCCCTCATCAATGTGGTGCACCACTTCCATCTGAAGGAAGGGATGAAATATGTGAAC ATTGGTCAGGGTATGATGCTGATCAACCACTACAAATACCAAGTCTGGGAGGTGTTCAAG GATAAGTTCTCCGGACGTGTCGCGACATATGTTGCTGATTGGCAGGACGAGGAGAATGTT GGATCAAGGGACAGGGCTCCTGGGCTTGGGACCAAACCGGTTGAACCAGAGGATTGGCCG AGACGTTTCTGTGAAGTATATGATAACGGTTTGAAAGATTTTGTTCAGAAAGTTTTCACA GACCCACACACTGGAAATCTTCCATGGTAG

Peptide Sequence

PEP ID	Os08t0121900-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:1197186:1200087:-1 gene:Os08g0121900 transcript:Os08t0121900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF23 family protein. (Os08t0121900-01);Similar to predicted protein. (Os08t0121900-02)
Sequence	PALVDRSEREGSCWRQWCVRPSATLNAVSSERGAQQAGMVSVDAVLPSVHIQHAVALPDH VLLMLRDGSLLPASGQFECLYSPVNSSQLRRQPLSVATLPDGPSLVHCPAGPSRVAVSLS LAQSVPVAPLQWDRLVYTALIDSKDNSTVVFAKGMNLRPGRLGVPSRYECVFGRDFSKPK LVVTSPVVSAAQEIFRCVTPVRIRRYLRMTTGGKNSVNNDDKPMLVSIRTKGRGSSTLPS IAQPEPLPRYNKHWRRKAHSMCVCTMLRNQARFLREWIIYHSRIGVQRWFIYDNNSDDGI EEVLNTMDSSRYNVTRYLWPWMKSQEAGFAHCALRARESCEWVGFIDIDEFLHFPGNQTL QDVLRNYSVKPRIGELRTACHSFGPSGRTKIPKKGVTTGYTCRLAAPERHKSIVRPDALN PSLINVVHHFHLKEGMKYVNIGQGMMLINHYKYQVWEVFKDKFSGRVATYVADWQDEENV GSRDRAPGLGTKPVEPEDWPRRFCEVYDNGLKDFVQKVFTDPHTGNLPW

Transcript Sequence

Transcript ID	Os08t0121900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1197186:1200087:-1 gene:Os08g0121900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF23 family protein. (Os08t0121900-01);Similar to predicted protein. (Os08t0121900-02)
Sequence	CTCCGCCTCCTCGCCATTTACGGCAGCAACCGCGGCGGAGAGAGACGACCGAGGAGAGAG AGAGAGAGAGAGAGAGAGAGAGGGAGAGCTCCAGTGGTCGCCGCCGGCGAGGAGGAGCAG TGAATGGTGCGGCGCGTGGGGTTAGCCGGCGCTCGTGGATCGATCTGAGCGAGAGGGGAG CTGCTGGAGACAGTGGTGCGTGCGTCCGTCGGCCACCCTGAACGCCGTGTCGTCGGAGCG CGGCGCGCAGCAAGCCGGCATGGTCAGCGTCGACGCCGTGTTGCCTTCTGTTCATATCCA GCACGCGGTTGCCTTGCCGGACCATGTTCTCCTGATGCTCAGAGATGGCTCATTGCTGCC GGCTTCGGGGCAATTTGAGTGCCTGTACTCCCCTGTCAACTCGTCGCAGCTGCGTCGCCA GCCCTTGTCCGTCGCTACCTTGCCGGATGGACCCAGCCTCGTCCATTGTCCCGCCGGACC ATCCAGGGTCGCTGTGTCCCTCTCACTGGCGCAGTCGGTTCCGGTGGCGCCGTTGCAATG GGATCGGCTGGTGTACACTGCACTTATTGACAGCAAGGACAACTCCACCGTTGTGTTTGC AAAGGGGATGAACCTCCGTCCGGGTCGTCTAGGTGTGCCATCACGGTACGAGTGTGTCTT TGGCCGAGACTTTTCGAAGCCAAAGCTTGTTGTCACCTCCCCAGTGGTTTCTGCTGCTCA GGAGATATTCCGGTGTGTGACACCAGTTCGCATTCGCCGGTACCTCCGGATGACTACCGG TGGCAAAAACAGCGTAAACAATGATGACAAGCCTATGTTGGTCTCCATCAGGACTAAGGG CCGGGGAAGCTCTACACTCCCCTCAATCGCGCAACCGGAGCCGCTTCCTCGGTACAACAA GCATTGGAGACGAAAGGCACACTCAATGTGTGTCTGCACCATGCTTCGCAACCAAGCACG GTTCCTGCGGGAATGGATCATCTATCACTCACGTATTGGTGTGCAGCGGTGGTTCATCTA TGACAACAACAGCGACGATGGCATTGAGGAGGTCCTCAACACCATGGATTCATCCAGGTA CAATGTGACACGCTATTTATGGCCATGGATGAAATCTCAGGAGGCTGGATTTGCACATTG TGCACTCAGGGCTCGAGAGAGCTGTGAGTGGGTGGGGTTCATTGACATAGATGAGTTCCT GCACTTCCCTGGCAACCAAACACTACAAGATGTCCTCCGAAATTACTCTGTCAAGCCACG GATCGGTGAGCTCAGGACTGCATGCCATAGTTTTGGTCCATCAGGCCGGACTAAGATCCC AAAGAAAGGTGTTACAACAGGCTACACCTGCCGGCTGGCTGCACCTGAGCGCCATAAGTC AATTGTCAGGCCAGACGCATTGAACCCATCCCTCATCAATGTGGTGCACCACTTCCATCT GAAGGAAGGGATGAAATATGTGAACATTGGTCAGGGTATGATGCTGATCAACCACTACAA ATACCAAGTCTGGGAGGTGTTCAAGGATAAGTTCTCCGGACGTGTCGCGACATATGTTGC TGATTGGCAGGACGAGGAGAATGTTGGATCAAGGGACAGGGCTCCTGGGCTTGGGACCAA ACCGGTTGAACCAGAGGATTGGCCGAGACGTTTCTGTGAAGTATATGATAACGGTTTGAA AGATTTTGTTCAGAAAGTTTTCACAGACCCACACACTGGAAATCTTCCATGGTAGATTGG TAAACACTGTATTTGGTCTTGCACAGCACGGCACCACAATACATGACATGGAGACACAGA CAGGGAAAGAAGAACCAAAAAGAAATTAGATAGAAGAGCGATTTGCTCTTTGGTATATTT TTTGAATTTTAAGGTCTTTTGATCTTTTCTTAGTTCATTAGAATCATCATTTTTTGTTAC ATATCTAAGAAGGAAATGATTCTTTTGTAGATAAAGATAGGTAGCACAATTCATTGTAAG TTTGGTTGGGGGGAGACAATCAATACAATCAATTTCTTGATTTC