Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0120500-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:1121769:1125964:-1 gene:Os08g0120500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Topoisomerase-like protein. (Os08t0120500-01);Similar to predicted protein. (Os08t0120500-02);Hypothetical conserved gene. (Os08t0120500-03)
Sequence	GGGGGTGGGGTGAGGCACGTGCGGCGGTCGCATTCCGGGAAGACCATTAAGGTGAAGAAA GATGGTGCTGGTGGCAAAGGTACCTGGGGAAAACTTATAGATACAGACACAGATGCATGC CTTGACCGCAATGACCCAAACTATGACAGTGATGAGGAACCATATGAACTAGTTGAAGCC CCTGTTTCAACCCCAGTAGAGGACTACAAGAAATCTGTTGCCCCAATTATTGAGGAATAT TTCAGCACTGGTGATGTTAAATTGGCTGCTTCTGATCTGAAAGAGTTGGGTTATGATGAT TTCCACCGTTACTTTGTCAAGAAGCTTGTTTCCATGGCAATGGATAGGCATGACAAGGAG AAAGAGATGGCGTCAGTGCTTTTATCATCTCTTTATGGTGATGTGATCAGTTCTACCCAA ATCAGACTAGGCTTTGTGATGCTGCTAGAGGCTGTTGATGACTTGGCTGTTGACATACTT GACGCGGTTGATGTTCTTGCTCTTTTCATTGCACGAGCTGTTGTTGATGACATTCTGCCA CCTGCTTTTCTCAGCAGGGAAAAAGCGAGTCTCTCCGAGTCTTCAAAGGGGATGCAAGTT GTACAGATTGCAGAAAAGAGCTATCTTTCAGCACCCCACCATGCAGAGTTGCTTGAACGG CGATGGGGTGGTTCAACTCGCACCACAGTAGACGCTGTAAAGTTGAGGATTACTGATCTT CTTAAGGAATATATTAAGAATGGTGACACAGCTGAGGCGTGTAGGTGCATCAGAGAATTG GCAGTGCCATTTTTTCACCATGAGGTTGTCAAGCGAGCTCTCACTCTTGGAATGGAGAGT CCAACTGCAGAAGCTCTTATTGTCAAGCTTCTGAAGGAAGCATCTGAGGAATTGCTGATA AGCTCTAGTCAGATGATGAAGGGATTTTCTCGTGTTGTAGATAGTCTTGATGACCTATCT CTTGATATACCATCTGCAAAATCTCAATTCCAGACATTGGTATCAAAAGCAGTTTCTGAA GGATGGCTCGACTCTTCGTTTGTACATGTAGGTGCCAATGGGGATGTCCAAGATGATGAA CATGAGAAGCTGAGGAGGTACAAGAAAGAGGCTGTTTCTATGATTCATGAGTACTTTCTC TCTGATGATGTACCTGAGATTATTCGCAGCCTCAAAGAGCTTGGTTCTCCAGAGTACAAC CCCGTCTTTATTAAGAAGCTTATAACAATTGCTATGGACCGCAAAAACAGGGAGAAAGAG ATGGCTTCAATTCTTCTATCCTCATTAAGCATGGAATTGTTCTCAACAGAAGACATTGTC AAGGGTTTCATAATGCTTCTTGAATCTGCAGAAGATACCGCACTTGATATATTGGATGCC TCAGATGAGCTGGGACTGTTCCTAGCCAGAGCAGTGATTGATGATGTGCTTGCGCCTCTG AACTTAGATGAGATAAGCGGCAAGCTTCCACCAAACTGCAGCGGGGCTGAAACATTGAAC ATGGCGCGCTCCCTTGCCACTGCCCGCCATGCAGGAGAGAGGCTTCTGAGATGCTGGGGC GGTGGGACAGGATGGGTTGTGGAGGACACAAAGGACAAGATAGCAAAGCTTCTGGAGGAG TACGAGAGCGGAGGCGATGTAGGAGAAGCTTGCAACTGCATCCGCGAGCTGCACATGCCG TTCTTCAATCATGAGGTGGTCAAGAAGGCGCTTGTCATGGCAATGGAAAAGAAGAACGAC AGGATCCTCGGTCTGCTGCAGGAGTGCTTTGGTGAAGGGATCATCACCATCAACCAGATG ACCAAGGGGTTCTCAAGGGTGAGGGATGGGCTTGATGATCTGGCTCTCGATATTCCTGAT GCCAGGGAGAAGTTCCTGTCCTATGTGGAGCATGCCAAGAAGAGCGGATGGCTTCTACCC TCATTCGGCGTCGCTACTTCAGCTTGA

Peptide Sequence

PEP ID	Os08t0120500-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:1121769:1125964:-1 gene:Os08g0120500 transcript:Os08t0120500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Topoisomerase-like protein. (Os08t0120500-01);Similar to predicted protein. (Os08t0120500-02);Hypothetical conserved gene. (Os08t0120500-03)
Sequence	GGGVRHVRRSHSGKTIKVKKDGAGGKGTWGKLIDTDTDACLDRNDPNYDSDEEPYELVEA PVSTPVEDYKKSVAPIIEEYFSTGDVKLAASDLKELGYDDFHRYFVKKLVSMAMDRHDKE KEMASVLLSSLYGDVISSTQIRLGFVMLLEAVDDLAVDILDAVDVLALFIARAVVDDILP PAFLSREKASLSESSKGMQVVQIAEKSYLSAPHHAELLERRWGGSTRTTVDAVKLRITDL LKEYIKNGDTAEACRCIRELAVPFFHHEVVKRALTLGMESPTAEALIVKLLKEASEELLI SSSQMMKGFSRVVDSLDDLSLDIPSAKSQFQTLVSKAVSEGWLDSSFVHVGANGDVQDDE HEKLRRYKKEAVSMIHEYFLSDDVPEIIRSLKELGSPEYNPVFIKKLITIAMDRKNREKE MASILLSSLSMELFSTEDIVKGFIMLLESAEDTALDILDASDELGLFLARAVIDDVLAPL NLDEISGKLPPNCSGAETLNMARSLATARHAGERLLRCWGGGTGWVVEDTKDKIAKLLEE YESGGDVGEACNCIRELHMPFFNHEVVKKALVMAMEKKNDRILGLLQECFGEGIITINQM TKGFSRVRDGLDDLALDIPDAREKFLSYVEHAKKSGWLLPSFGVATSA

Transcript Sequence

Transcript ID	Os08t0120500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1121769:1125964:-1 gene:Os08g0120500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Topoisomerase-like protein. (Os08t0120500-01);Similar to predicted protein. (Os08t0120500-02);Hypothetical conserved gene. (Os08t0120500-03)
Sequence	GTGGGGGTGGGGTGAGGCACGTGCGGCGGTCGCATTCCGGGAAGACCATTAAGGTGAAGA AAGATGGTGCTGGTGGCAAAGGTACCTGGGGAAAACTTATAGATACAGACACAGATGCAT GCCTTGACCGCAATGACCCAAACTATGACAGTGATGAGGAACCATATGAACTAGTTGAAG CCCCTGTTTCAACCCCAGTAGAGGACTACAAGAAATCTGTTGCCCCAATTATTGAGGAAT ATTTCAGCACTGGTGATGTTAAATTGGCTGCTTCTGATCTGAAAGAGTTGGGTTATGATG ATTTCCACCGTTACTTTGTCAAGAAGCTTGTTTCCATGGCAATGGATAGGCATGACAAGG AGAAAGAGATGGCGTCAGTGCTTTTATCATCTCTTTATGGTGATGTGATCAGTTCTACCC AAATCAGACTAGGCTTTGTGATGCTGCTAGAGGCTGTTGATGACTTGGCTGTTGACATAC TTGACGCGGTTGATGTTCTTGCTCTTTTCATTGCACGAGCTGTTGTTGATGACATTCTGC CACCTGCTTTTCTCAGCAGGGAAAAAGCGAGTCTCTCCGAGTCTTCAAAGGGGATGCAAG TTGTACAGATTGCAGAAAAGAGCTATCTTTCAGCACCCCACCATGCAGAGTTGCTTGAAC GGCGATGGGGTGGTTCAACTCGCACCACAGTAGACGCTGTAAAGTTGAGGATTACTGATC TTCTTAAGGAATATATTAAGAATGGTGACACAGCTGAGGCGTGTAGGTGCATCAGAGAAT TGGCAGTGCCATTTTTTCACCATGAGGTTGTCAAGCGAGCTCTCACTCTTGGAATGGAGA GTCCAACTGCAGAAGCTCTTATTGTCAAGCTTCTGAAGGAAGCATCTGAGGAATTGCTGA TAAGCTCTAGTCAGATGATGAAGGGATTTTCTCGTGTTGTAGATAGTCTTGATGACCTAT CTCTTGATATACCATCTGCAAAATCTCAATTCCAGACATTGGTATCAAAAGCAGTTTCTG AAGGATGGCTCGACTCTTCGTTTGTACATGTAGGTGCCAATGGGGATGTCCAAGATGATG AACATGAGAAGCTGAGGAGGTACAAGAAAGAGGCTGTTTCTATGATTCATGAGTACTTTC TCTCTGATGATGTACCTGAGATTATTCGCAGCCTCAAAGAGCTTGGTTCTCCAGAGTACA ACCCCGTCTTTATTAAGAAGCTTATAACAATTGCTATGGACCGCAAAAACAGGGAGAAAG AGATGGCTTCAATTCTTCTATCCTCATTAAGCATGGAATTGTTCTCAACAGAAGACATTG TCAAGGGTTTCATAATGCTTCTTGAATCTGCAGAAGATACCGCACTTGATATATTGGATG CCTCAGATGAGCTGGGACTGTTCCTAGCCAGAGCAGTGATTGATGATGTGCTTGCGCCTC TGAACTTAGATGAGATAAGCGGCAAGCTTCCACCAAACTGCAGCGGGGCTGAAACATTGA ACATGGCGCGCTCCCTTGCCACTGCCCGCCATGCAGGAGAGAGGCTTCTGAGATGCTGGG GCGGTGGGACAGGATGGGTTGTGGAGGACACAAAGGACAAGATAGCAAAGCTTCTGGAGG AGTACGAGAGCGGAGGCGATGTAGGAGAAGCTTGCAACTGCATCCGCGAGCTGCACATGC CGTTCTTCAATCATGAGGTGGTCAAGAAGGCGCTTGTCATGGCAATGGAAAAGAAGAACG ACAGGATCCTCGGTCTGCTGCAGGAGTGCTTTGGTGAAGGGATCATCACCATCAACCAGA TGACCAAGGGGTTCTCAAGGGTGAGGGATGGGCTTGATGATCTGGCTCTCGATATTCCTG ATGCCAGGGAGAAGTTCCTGTCCTATGTGGAGCATGCCAAGAAGAGCGGATGGCTTCTAC CCTCATTCGGCGTCGCTACTTCAGCTTGAACCAATGTTATGAGTGAGCAGGAAGCATCAA GCTGGACCGGACCGATGAACAACGAAGCAAGAAGGCACATGCCGTGATATTTGCTGCATC CAAGATATTCCAAGTTGATGATTTTCATTTGCGTTTTCTGATGCTTGTCGTTGTGCTTGC GCGTGTAGGTAGCGGAGCGAGCCCCTCTTACTTGTGGTTGTTGTGGTGGCTTATGTGTCT AGATCTTTCACCTCTGACACACCCGTTGCTGTTGTTAGTTGCATTCCATTTTTAACTTCC CCCATAGACCCTTTTTTACTTCACAAGTAAAAACAGAGAAAAGAACCCCCGTCATGTAAA AGTTGCTCCCTGCCTCAGCATTTGCATCTGTTGCTTACC