Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0120000-05
CDS Infomation	cds chromosome:IRGSP-1.0:8:1092691:1094686:-1 gene:Os08g0120000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 2 description:Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-01);Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-02);Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-04);Similar to Chimeric SDH2-RPS14 protein. (Os08t0120000-05)
Sequence	ATGGCCGCCGCCGCCCTCCTCCGCCGCTCGCCGGCGGCGCGCGCCCTCCTCTCCCCGGCG CTCTCCTCCCGCCTCGTCGCCTCCAAGCCCCACTCGTCGTCCCCCGCGCCGCCGCCGCCG CCGTCGAAGGCGGGGGCGAACACCAAGACGTTCTCGATCTACAGGTGGGATCCCGACTCG CCGTCGACGAAGCCCCACCTCAAGGACTACAAGGTGGACCTCTCCGACTGCGGGCCGATG GTGCTCGACGTGCTGCTCAAGATCAAGAACGAGCAGGACCCGTCGCTCACCTTCCGCCGC AGCTGCCGCGAGGGGATCTGCGGGAGCTGCGCGATGAACATCGACGGCGACAATGGCCTC GCCTGCCTCACCAAGATCTCGTCGGCGTCCTCGGCCTCCACGATCTCGCCGCTCCCCCAC ATGTTCGTCATCAAGGACCTCGTCGTCGACATGACCAACTTCTACAACCAGTACAAGAGC GTGGAGCCGTGGCTCAAGCGCAAGGACGCGCCGCCGCAGCCCGGGAAGGAGATCCCGCAG ACCAAGGCCGACCGCGCCAAGCTCGACGGCATGTACGAGTGCATCCTCTGCGCCTGCTGC TCCACCTCCTGCCCCTCCTACTGGTGGAACCCCGAGGAGTACCTCGGCCCCGCCGCGCTC CTCCACGCCAACAGGCTTCCGCTGTTGGGGACGCTAATCAAACCAAAACCCAACATGTTC ATGCACATCCAAGCTCGAGGATATCACGGGGTATCGGAGAAGAGAAACTTGCTGGATCAC AAACGTAGATTGCTTGCAGCAAAATATGAACTGAAAGGAAAGCTTTATAAGGCTGTTTGT AGGGACCCTGATCTTCCAGCAGATATGCAGGACCAGTTTCGCTATAAGCTGTCCAAGTTG CCAAGAAATAGCTCCATGACACGCCTTAGAAACCGCTGTATCTTCACGGGCCGCTCGCGC GCTGTTTACAAGAAATTCCGCATGTCTCGTATTGTGTTCCGGTCATTGGCTAATAAGGGT GAATTGTTGGGTGTTAAGAAAGCGTCTTGGTAG

Peptide Sequence

PEP ID	Os08t0120000-05
PEP Infomation	pep chromosome:IRGSP-1.0:8:1092691:1094686:-1 gene:Os08g0120000 transcript:Os08t0120000-05 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 2 description:Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-01);Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-02);Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-04);Similar to Chimeric SDH2-RPS14 protein. (Os08t0120000-05)
Sequence	MAAAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANTKTFSIYRWDPDS PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRLPLLGTLIKPKPNMF MHIQARGYHGVSEKRNLLDHKRRLLAAKYELKGKLYKAVCRDPDLPADMQDQFRYKLSKL PRNSSMTRLRNRCIFTGRSRAVYKKFRMSRIVFRSLANKGELLGVKKASW

Transcript Sequence

Transcript ID	Os08t0120000-05
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:1092691:1094686:-1 gene:Os08g0120000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 2 description:Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-01);Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-02);Succinate dehydrogenase iron-protein subunit (SDHB). (Os08t0120000-04);Similar to Chimeric SDH2-RPS14 protein. (Os08t0120000-05)
Sequence	GCCCTCTGACCCCGATAGAAAGGGAGGAAAAAAAAAAGAGAAGGCGAAACCCCAAATCCG CCGCGATGGCCGCCGCCGCCCTCCTCCGCCGCTCGCCGGCGGCGCGCGCCCTCCTCTCCC CGGCGCTCTCCTCCCGCCTCGTCGCCTCCAAGCCCCACTCGTCGTCCCCCGCGCCGCCGC CGCCGCCGTCGAAGGCGGGGGCGAACACCAAGACGTTCTCGATCTACAGGTGGGATCCCG ACTCGCCGTCGACGAAGCCCCACCTCAAGGACTACAAGGTGGACCTCTCCGACTGCGGGC CGATGGTGCTCGACGTGCTGCTCAAGATCAAGAACGAGCAGGACCCGTCGCTCACCTTCC GCCGCAGCTGCCGCGAGGGGATCTGCGGGAGCTGCGCGATGAACATCGACGGCGACAATG GCCTCGCCTGCCTCACCAAGATCTCGTCGGCGTCCTCGGCCTCCACGATCTCGCCGCTCC CCCACATGTTCGTCATCAAGGACCTCGTCGTCGACATGACCAACTTCTACAACCAGTACA AGAGCGTGGAGCCGTGGCTCAAGCGCAAGGACGCGCCGCCGCAGCCCGGGAAGGAGATCC CGCAGACCAAGGCCGACCGCGCCAAGCTCGACGGCATGTACGAGTGCATCCTCTGCGCCT GCTGCTCCACCTCCTGCCCCTCCTACTGGTGGAACCCCGAGGAGTACCTCGGCCCCGCCG CGCTCCTCCACGCCAACAGGCTTCCGCTGTTGGGGACGCTAATCAAACCAAAACCCAACA TGTTCATGCACATCCAAGCTCGAGGATATCACGGGGTATCGGAGAAGAGAAACTTGCTGG ATCACAAACGTAGATTGCTTGCAGCAAAATATGAACTGAAAGGAAAGCTTTATAAGGCTG TTTGTAGGGACCCTGATCTTCCAGCAGATATGCAGGACCAGTTTCGCTATAAGCTGTCCA AGTTGCCAAGAAATAGCTCCATGACACGCCTTAGAAACCGCTGTATCTTCACGGGCCGCT CGCGCGCTGTTTACAAGAAATTCCGCATGTCTCGTATTGTGTTCCGGTCATTGGCTAATA AGGGTGAATTGTTGGGTGTTAAGAAAGCGTCTTGGTAGATGCTAACAACCAGTAGATCAA AGCACTAGCTCTGCAGTAGTCCAGCACAATAAGTTTGCCTCCATGCAGTTTTTCAGTGTT TGCAACCTGAAACTATATTTCAATCTTATGACCAGCAGCCAATCTGGCACTCTTTC