Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0117800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:981210:984101:1 gene:Os08g0117800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os08t0117800-01)
Sequence	ATGTCGCTGGCGCCGCCGGCCGCCAGGGTGCACCTGCAGGAGGTGGCGGTCAATGTCAAC AAGAGCCTCTTCTGCTTCGACCACGACTCCGGCGCCACCTCCTCCGGCGTCTTCGCCGGC GACGACCCCCTCAAGTTCTACTTCCCCCTCTTCCTCTACCACGTCTGCACCGTCTTCGCC CTCTCCCGCGCCATCAACGCCCTCCTCCGCCGCGCCAACGTCCCCCTCGTCATCTCCCAG ATCCTCGCCGGCACGCTTCTTGGCCCGTCGTTCCTCGGCCACATCGCGCCGCGCGTCGGC GAGCTGTTCGCGACGCCGGAGGGGTGGGTGCTCATCAACACGATCGGCGGCTACGCCTTC ACGCTCCACATCTTCGTCATCGGCGTCAAGACGGACCTGGGCATGATCCGCAAGTCCGGC AATAAGGCGATCGCCATCGCCGTGCTCGGCACCGCCTCGCCGCACCTCGCCATGTACATC ACCGGCCTCGCGCTCAAGGCGCGGGTGCCGGCGGCGTGGGCGGCGTCGTTCCTCCTCACA AACCTCAACTCGTGGTGGTCGCTCTCGGCGTTCATCGTCGTGTGCTGCACGCTGCACGAC CTCAACCTGCTGTCGTCCAAGCTCGGCCGCCTCGCCATGTCCGCGGCGCTCATCGGCGAC TTCGCCAACACCTTCGCCATCGCCGGCGTCACCTCCTACCTCCTCGCGGCGAGCCCTTCG GAGAAGCTGCAGCGGATCGGCATCGCCTCCGTGATCGCCTTCACGACGTTCATCGCGTTC ATGGCGCTCGTGGCGCGGCCGGCGATCCTGCGGCTGATCCGCGACGTGCCGGAGGGCGCC CTCCTCACCGAGGCGCGCCTCATCGCCGTGCTGCTCATCTGCCTCACCTGCAGCTTCACC GGCGAGCTCCTCGGCCTGCACGCCACGTACGGCCCGTTCATGCTCGGCCTGATGCTCCCC GGCGGCGCGCCGCTCGGGGTGACCATGGCGGAGCGGCTGGACCGGCTCGTCGCCGGCGTG CTGATGCCGCTGCTGTTCGCGCAGGGGGGGATGCGGCTGAACGTGAAAAAGATCACCGAC GCCTCGACGTGCGCCCTCCTCGAGACGTTCCTCGTCGTCGGCGTCGTCTCCAAGTTCGTC GCCTCCATCATGCCGTGCCTCTACTTCCGGATGCCCGTCCGCGACGCCGTCGTCGTGGGG CTCATGATGAACTTCAAGGGCATCACGGAGGTGGTGTACGCGTCGGCGTTCGAGGACGCC CAGGTGCTCGACGAGCAGGTGTACGCGGCGTTCATGATCAACGTGCTGCTGATCGGCGCC GCGTCGGCGTCGGCGGTGAAGTACATGTACCACCCGGAGGAGAAGTACGTGGCGTACCGG CGGCGGACGGTGGAGCACAAGAAGCTCGGCGAGGAGCTGCGCGTGGTGGCGTGCATCCAC TCGCAGGACGACGTCGGGCCGATGCTGGCGCTACTCGACGCGTCGTCGCCGACGCCGATG TCGCCGCTCTCCGTCTATCTCCTCCACCTCATGCCGCTCGCCGGCCTGACCAGCTCCGTG CTCCGGCACTTCAAGCACGGCAAGCGCAACTGCGTGCCGTCGGGGACCACCGACTCGGAG CGCGTCGTGAACGCGTTCCAGTTCTTCGTGCAGCAGCGGCCGCCGGGCGCGGCGTCGCTG GTCCCCTACGTGTGCATCGCGCCGTACGCCACCATGCACGACGACGTGTGCGCCGTGGCG CTCGAGAAGCGCGCCATGCTCATCGTCGTGCCCTTCCACAAGCGCCTCGCCATCGACGGG TCCGTCGAGCCGACGTCGCACAACGCCGGCGCGATCCAGGCGGCCAACACCAACATCCTC AACTACTCCCCCTGCTCCGTCGCCATCCTCGTCGACCGCGGCAGCCTCTCCACCGTCGCC GCCGCCGCCGCCGCGGCCGACGGGTTCCCGCACCGCGTCGCGCTCTACTTCCTCGGCGGC CCGGACGACCGGGAGGCGCTGGCGCTGGCGGCGACCATGGCCGAGGACGCGACGATCGGG CTCACCGTGTTCCGGTTCATGCTGCCAGCGGACAGGCAGAGCCGCGGCGGCGAGGGCGAC GGCGAGGAGGACCGCCGCGACGAGGCGGAGCTGCAGGAGTTCGTCCGGCGGTGGGTCGAC GACCACCGCGTCGCCTACAGCGAGAACATGGTCGGTGGCTCCGACGAGATGGTGGACGTC ATCCGGAAGACGAGCCCGGCGTTCAACCTGCTGGTCGTCGGCCGGCGATCGGAGAGCCCG GAGTCGCCGCTGACGGCCGGCATATCGGACTGGAGCGAGCACCTGGAGCTCGGCGTCCTC GGCGACCTCCTGACGTCGACAGACTTCGGATGCAGGGTGTCCACGCTGGTGGTGCAGCAG CAGACCATGGCGGCGGCCGGAGAATCCTGCCGGTTGCCGGAGTTGCCTGCAAAGCACAAA TCAGATGAACCTGTCTGA

Peptide Sequence

PEP ID	Os08t0117800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:981210:984101:1 gene:Os08g0117800 transcript:Os08t0117800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os08t0117800-01)
Sequence	MSLAPPAARVHLQEVAVNVNKSLFCFDHDSGATSSGVFAGDDPLKFYFPLFLYHVCTVFA LSRAINALLRRANVPLVISQILAGTLLGPSFLGHIAPRVGELFATPEGWVLINTIGGYAF TLHIFVIGVKTDLGMIRKSGNKAIAIAVLGTASPHLAMYITGLALKARVPAAWAASFLLT NLNSWWSLSAFIVVCCTLHDLNLLSSKLGRLAMSAALIGDFANTFAIAGVTSYLLAASPS EKLQRIGIASVIAFTTFIAFMALVARPAILRLIRDVPEGALLTEARLIAVLLICLTCSFT GELLGLHATYGPFMLGLMLPGGAPLGVTMAERLDRLVAGVLMPLLFAQGGMRLNVKKITD ASTCALLETFLVVGVVSKFVASIMPCLYFRMPVRDAVVVGLMMNFKGITEVVYASAFEDA QVLDEQVYAAFMINVLLIGAASASAVKYMYHPEEKYVAYRRRTVEHKKLGEELRVVACIH SQDDVGPMLALLDASSPTPMSPLSVYLLHLMPLAGLTSSVLRHFKHGKRNCVPSGTTDSE RVVNAFQFFVQQRPPGAASLVPYVCIAPYATMHDDVCAVALEKRAMLIVVPFHKRLAIDG SVEPTSHNAGAIQAANTNILNYSPCSVAILVDRGSLSTVAAAAAAADGFPHRVALYFLGG PDDREALALAATMAEDATIGLTVFRFMLPADRQSRGGEGDGEEDRRDEAELQEFVRRWVD DHRVAYSENMVGGSDEMVDVIRKTSPAFNLLVVGRRSESPESPLTAGISDWSEHLELGVL GDLLTSTDFGCRVSTLVVQQQTMAAAGESCRLPELPAKHKSDEPV

Transcript Sequence

Transcript ID	Os08t0117800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:981210:984101:1 gene:Os08g0117800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os08t0117800-01)
Sequence	TTTTTCCCCGTTTCCTTCGGATCGCGCGCGGCCACTCCACCGGACTCCCCGAGCTCGCTA GCTCCTCCGGCCACCCATGTCGCTGGCGCCGCCGGCCGCCAGGGTGCACCTGCAGGAGGT GGCGGTCAATGTCAACAAGAGCCTCTTCTGCTTCGACCACGACTCCGGCGCCACCTCCTC CGGCGTCTTCGCCGGCGACGACCCCCTCAAGTTCTACTTCCCCCTCTTCCTCTACCACGT CTGCACCGTCTTCGCCCTCTCCCGCGCCATCAACGCCCTCCTCCGCCGCGCCAACGTCCC CCTCGTCATCTCCCAGATCCTCGCCGGCACGCTTCTTGGCCCGTCGTTCCTCGGCCACAT CGCGCCGCGCGTCGGCGAGCTGTTCGCGACGCCGGAGGGGTGGGTGCTCATCAACACGAT CGGCGGCTACGCCTTCACGCTCCACATCTTCGTCATCGGCGTCAAGACGGACCTGGGCAT GATCCGCAAGTCCGGCAATAAGGCGATCGCCATCGCCGTGCTCGGCACCGCCTCGCCGCA CCTCGCCATGTACATCACCGGCCTCGCGCTCAAGGCGCGGGTGCCGGCGGCGTGGGCGGC GTCGTTCCTCCTCACAAACCTCAACTCGTGGTGGTCGCTCTCGGCGTTCATCGTCGTGTG CTGCACGCTGCACGACCTCAACCTGCTGTCGTCCAAGCTCGGCCGCCTCGCCATGTCCGC GGCGCTCATCGGCGACTTCGCCAACACCTTCGCCATCGCCGGCGTCACCTCCTACCTCCT CGCGGCGAGCCCTTCGGAGAAGCTGCAGCGGATCGGCATCGCCTCCGTGATCGCCTTCAC GACGTTCATCGCGTTCATGGCGCTCGTGGCGCGGCCGGCGATCCTGCGGCTGATCCGCGA CGTGCCGGAGGGCGCCCTCCTCACCGAGGCGCGCCTCATCGCCGTGCTGCTCATCTGCCT CACCTGCAGCTTCACCGGCGAGCTCCTCGGCCTGCACGCCACGTACGGCCCGTTCATGCT CGGCCTGATGCTCCCCGGCGGCGCGCCGCTCGGGGTGACCATGGCGGAGCGGCTGGACCG GCTCGTCGCCGGCGTGCTGATGCCGCTGCTGTTCGCGCAGGGGGGGATGCGGCTGAACGT GAAAAAGATCACCGACGCCTCGACGTGCGCCCTCCTCGAGACGTTCCTCGTCGTCGGCGT CGTCTCCAAGTTCGTCGCCTCCATCATGCCGTGCCTCTACTTCCGGATGCCCGTCCGCGA CGCCGTCGTCGTGGGGCTCATGATGAACTTCAAGGGCATCACGGAGGTGGTGTACGCGTC GGCGTTCGAGGACGCCCAGGTGCTCGACGAGCAGGTGTACGCGGCGTTCATGATCAACGT GCTGCTGATCGGCGCCGCGTCGGCGTCGGCGGTGAAGTACATGTACCACCCGGAGGAGAA GTACGTGGCGTACCGGCGGCGGACGGTGGAGCACAAGAAGCTCGGCGAGGAGCTGCGCGT GGTGGCGTGCATCCACTCGCAGGACGACGTCGGGCCGATGCTGGCGCTACTCGACGCGTC GTCGCCGACGCCGATGTCGCCGCTCTCCGTCTATCTCCTCCACCTCATGCCGCTCGCCGG CCTGACCAGCTCCGTGCTCCGGCACTTCAAGCACGGCAAGCGCAACTGCGTGCCGTCGGG GACCACCGACTCGGAGCGCGTCGTGAACGCGTTCCAGTTCTTCGTGCAGCAGCGGCCGCC GGGCGCGGCGTCGCTGGTCCCCTACGTGTGCATCGCGCCGTACGCCACCATGCACGACGA CGTGTGCGCCGTGGCGCTCGAGAAGCGCGCCATGCTCATCGTCGTGCCCTTCCACAAGCG CCTCGCCATCGACGGGTCCGTCGAGCCGACGTCGCACAACGCCGGCGCGATCCAGGCGGC CAACACCAACATCCTCAACTACTCCCCCTGCTCCGTCGCCATCCTCGTCGACCGCGGCAG CCTCTCCACCGTCGCCGCCGCCGCCGCCGCGGCCGACGGGTTCCCGCACCGCGTCGCGCT CTACTTCCTCGGCGGCCCGGACGACCGGGAGGCGCTGGCGCTGGCGGCGACCATGGCCGA GGACGCGACGATCGGGCTCACCGTGTTCCGGTTCATGCTGCCAGCGGACAGGCAGAGCCG CGGCGGCGAGGGCGACGGCGAGGAGGACCGCCGCGACGAGGCGGAGCTGCAGGAGTTCGT CCGGCGGTGGGTCGACGACCACCGCGTCGCCTACAGCGAGAACATGGTCGGTGGCTCCGA CGAGATGGTGGACGTCATCCGGAAGACGAGCCCGGCGTTCAACCTGCTGGTCGTCGGCCG GCGATCGGAGAGCCCGGAGTCGCCGCTGACGGCCGGCATATCGGACTGGAGCGAGCACCT GGAGCTCGGCGTCCTCGGCGACCTCCTGACGTCGACAGACTTCGGATGCAGGGTGTCCAC GCTGGTGGTGCAGCAGCAGACCATGGCGGCGGCCGGAGAATCCTGCCGGTTGCCGGAGTT GCCTGCAAAGCACAAATCAGATGAACCTGTCTGACAAATCATGACACTCTTTATCTCTAG TTGTAAGCATATTTTACTGTGTTGTACCACTAACATCTTGGCAGCTAGAATGCAATCTGT AGCAACCATGCCTTCCTAGTCTTTTCTATGAACACGCTAATATGTTTATAATCTCATGAT TGGATCAACAGACTAAACAGCTCAGATAGCAACAAAAACAGATCTACTAGTAGAGTAGTA AGTCTCCAAAGAGAGTTAAGAGCAAGTACCATTGCTTAGTCCAGC