Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0114200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:763213:765079:1 gene:Os08g0114200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B16 description:Similar to CEL5=CELLULASE 5 (Fragment). (Os08t0114200-01)
Sequence	ATGTGCAGTTGGTCACTCTCGAGCCACACTCTCACTTCGCCGGTGAGGCAGGCAGCAATG GAGCCAAAGAGCAGCAGCTGCGGCGGCGCCGGCATTCGGCTGCGGCTGCTGGTCGTGCTC CACCTGCTGCTCTTAGTTCCGAGCTCGGCCATGGCGTTCAACTACGCCGACGCGCTCGCC AAGTCCATCATCTTCTTCGAGGGCCAGCGCTCCGGCAAGCTCCCGCCCGGCAACCGCATG CCGTGGCGCGCCGACTCCGGCCTCACCGACGGCGCCCAGTACAATGTGGATTTGGTGGGC GGGTACTACGACGCCGGCGACAACGTCAAGTTCGGCCTGCCCATGGCGTTCTCGACGACG ATGCTGGCGTGGAGCGTGCTCGACTTCGGCAAGTTCATGGGCGCCGAGCTGCCCAACGCC CGCGCCGCCGTGCGCTGGGGCGCCGACTACCTCCTCAAGGCCGCCACCGCCACGCCCGGC GCGCTCTACGTCCAGGTCGCCGACCCCAACCAGGACCACCGCTGCTGGGAGCGCCCCGAG GACATGGACACACCCCGCAGCGTCTACCGCGTCACCGCCGACAAGCCGGGTTCCGACGTC GCCGGCGAGACGGCCGCCGCGCTCGCCGCGTCGTCCATGGTGTTCCGCCGCGCCGACCCG GCCTACTCCGCGCGCCTCCTCCACGCCGCGACGCAGGTGTTCGACTTCGCCGACCGGCAC CGCGGGTCGTACAGCGACTCGCTGGCGTCGTCGGTGTGCCCGTTCTACTGCTCCTACTCG GGCTACCACGACGAGCTCCTGTGGGGGGCGTCGTGGCTGCACCGCGCGTCGAGGAACGCG TCGTTCATGTCGTACGTGGAGGCGAACGGGATGCAGCTCGGCGCCGGGGACGACGACTAC TCCTTCAGCTGGGACGACAAGCGGGTGGGCACCAAGGTGCTCCTCGCCAAGGGCTTCCTC CGCAACCGCCTCCATGGCCTCGAGCTCTACAAGGCGCACTCCGACAGCTACATCTGCTCG CTGGTGCCCGGCACGGCGAGCTTCCAGTCGCGGTACACCCCCGGCGGCCTCCTGTACAGG GAAGGCTCCAGCAACATGCAGTACGTGACGACGGCGACGTTCCTGATGCTGGCGTACGCC AAGTACCTCCGGTCGAGCGGCGCCACCGCGTCGTGCGGCGACGGCGGCGGCGGAGCGAGG GGGGAGGTGTCGGCGGCGGAGCTGGTGGCGGTGGCGAAGCGGCAGGTGGACTACATCCTG GGGAAGAACCCGGCGGGGATGTCGTACATGGTGGGGTTCGGGTGCAGGTACCCGAGGCGG GCGCACCACCGCGGCGCGTCCATGCCGTCGGTGCGCGCCCACCCGGGGCGGATCTCCTGC GACGCCGGCTTCGGCTACCTCCACTCCGGCGAGCCCAACCCGAACGTGCTCGTCGGCGCC GTCGTCGGCGGGCCGGACAGCCGCGACGCCTTTGCCGACGACCGCGGCAACTTCGCGCAG TCGGAGCCGGCCACCTACATCAACGCGCCGCTCGTCGGCGCGCTCGCCTACTTCGCCGGA ACCACCAAGTAG

Peptide Sequence

PEP ID	Os08t0114200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:763213:765079:1 gene:Os08g0114200 transcript:Os08t0114200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B16 description:Similar to CEL5=CELLULASE 5 (Fragment). (Os08t0114200-01)
Sequence	MCSWSLSSHTLTSPVRQAAMEPKSSSCGGAGIRLRLLVVLHLLLLVPSSAMAFNYADALA KSIIFFEGQRSGKLPPGNRMPWRADSGLTDGAQYNVDLVGGYYDAGDNVKFGLPMAFSTT MLAWSVLDFGKFMGAELPNARAAVRWGADYLLKAATATPGALYVQVADPNQDHRCWERPE DMDTPRSVYRVTADKPGSDVAGETAAALAASSMVFRRADPAYSARLLHAATQVFDFADRH RGSYSDSLASSVCPFYCSYSGYHDELLWGASWLHRASRNASFMSYVEANGMQLGAGDDDY SFSWDDKRVGTKVLLAKGFLRNRLHGLELYKAHSDSYICSLVPGTASFQSRYTPGGLLYR EGSSNMQYVTTATFLMLAYAKYLRSSGATASCGDGGGGARGEVSAAELVAVAKRQVDYIL GKNPAGMSYMVGFGCRYPRRAHHRGASMPSVRAHPGRISCDAGFGYLHSGEPNPNVLVGA VVGGPDSRDAFADDRGNFAQSEPATYINAPLVGALAYFAGTTK

Transcript Sequence

Transcript ID	Os08t0114200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:763213:765079:1 gene:Os08g0114200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B16 description:Similar to CEL5=CELLULASE 5 (Fragment). (Os08t0114200-01)
Sequence	AGCAAATTGATATACTACTCCAGCACCGGCCAAATTAACTAACTTAACGGCCACTGCTTT TCACACTATATTAATGTGCAGTTGGTCACTCTCGAGCCACACTCTCACTTCGCCGGTGAG GCAGGCAGCAATGGAGCCAAAGAGCAGCAGCTGCGGCGGCGCCGGCATTCGGCTGCGGCT GCTGGTCGTGCTCCACCTGCTGCTCTTAGTTCCGAGCTCGGCCATGGCGTTCAACTACGC CGACGCGCTCGCCAAGTCCATCATCTTCTTCGAGGGCCAGCGCTCCGGCAAGCTCCCGCC CGGCAACCGCATGCCGTGGCGCGCCGACTCCGGCCTCACCGACGGCGCCCAGTACAATGT GGATTTGGTGGGCGGGTACTACGACGCCGGCGACAACGTCAAGTTCGGCCTGCCCATGGC GTTCTCGACGACGATGCTGGCGTGGAGCGTGCTCGACTTCGGCAAGTTCATGGGCGCCGA GCTGCCCAACGCCCGCGCCGCCGTGCGCTGGGGCGCCGACTACCTCCTCAAGGCCGCCAC CGCCACGCCCGGCGCGCTCTACGTCCAGGTCGCCGACCCCAACCAGGACCACCGCTGCTG GGAGCGCCCCGAGGACATGGACACACCCCGCAGCGTCTACCGCGTCACCGCCGACAAGCC GGGTTCCGACGTCGCCGGCGAGACGGCCGCCGCGCTCGCCGCGTCGTCCATGGTGTTCCG CCGCGCCGACCCGGCCTACTCCGCGCGCCTCCTCCACGCCGCGACGCAGGTGTTCGACTT CGCCGACCGGCACCGCGGGTCGTACAGCGACTCGCTGGCGTCGTCGGTGTGCCCGTTCTA CTGCTCCTACTCGGGCTACCACGACGAGCTCCTGTGGGGGGCGTCGTGGCTGCACCGCGC GTCGAGGAACGCGTCGTTCATGTCGTACGTGGAGGCGAACGGGATGCAGCTCGGCGCCGG GGACGACGACTACTCCTTCAGCTGGGACGACAAGCGGGTGGGCACCAAGGTGCTCCTCGC CAAGGGCTTCCTCCGCAACCGCCTCCATGGCCTCGAGCTCTACAAGGCGCACTCCGACAG CTACATCTGCTCGCTGGTGCCCGGCACGGCGAGCTTCCAGTCGCGGTACACCCCCGGCGG CCTCCTGTACAGGGAAGGCTCCAGCAACATGCAGTACGTGACGACGGCGACGTTCCTGAT GCTGGCGTACGCCAAGTACCTCCGGTCGAGCGGCGCCACCGCGTCGTGCGGCGACGGCGG CGGCGGAGCGAGGGGGGAGGTGTCGGCGGCGGAGCTGGTGGCGGTGGCGAAGCGGCAGGT GGACTACATCCTGGGGAAGAACCCGGCGGGGATGTCGTACATGGTGGGGTTCGGGTGCAG GTACCCGAGGCGGGCGCACCACCGCGGCGCGTCCATGCCGTCGGTGCGCGCCCACCCGGG GCGGATCTCCTGCGACGCCGGCTTCGGCTACCTCCACTCCGGCGAGCCCAACCCGAACGT GCTCGTCGGCGCCGTCGTCGGCGGGCCGGACAGCCGCGACGCCTTTGCCGACGACCGCGG CAACTTCGCGCAGTCGGAGCCGGCCACCTACATCAACGCGCCGCTCGTCGGCGCGCTCGC CTACTTCGCCGGAACCACCAAGTAGCCATTAGTGAGAGTGTGAGTGACGTGGCAGTGTGG GAGCGCGAGGCCAGTGAGATGAGCTCCCCCGCCACGCTGTATCGTTCGTTGACTTTGTCG TGTATTCGACGCAACAAACAGTATTTGCACGGAGTACGTACG