Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0113300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:715643:720168:1 gene:Os08g0113300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 68, U-box protein 68 description:Similar to STIP1 homology and U box-containing protein 1. (Os08t0113300-01)
Sequence	ATGTCGCCGGCGGCGGACAGCGCGGCGTCGAAGCGGCAGGCGGAGCTGCTCAAGCAGGAG GGCAACGCCTTCTTCAAGAAGGACCGCATCAGCGCCGCCATCGACGCCTACACCGGGGCC ATAGCTCTCTGCCCAAAGGTTGCAGTATATTGGACCAACCGAGCACTTTGCTACAAGAGG CGGAATGAGTGGGTTAGGGCTGAGGAAGATTGTAGAACAGCTATTCAGCTTGACAGCCAC TCTGTTAAGGCACATTACATGCTCGGGCTTGCACTTCTCAACAAGGACGAATTGGCCGAG GGAATAAAAGAACTAGAGAAGTCGTTGGAGCTTGGAAGGGGTGCACATCCAGCAAGTTAC ATGGTTGAAGAGATCTGGCAAGAGCTTTCTAAAGCAAAATACATAGAATGGGAAAATTTA TCAAGCGAACGAGTCCGTCAATTGCATAAGCTGAAGGAAGCATGTAAAGAAGCTCTTAGG AATTATAACAGCCTTGACAATCCTCCTGCATATGTCCCCGAGGAACAGCTAAATGAGCTT GAGGAAGTTTTTCGGAATGCCAGGAAGTCTGATATTCCAACAGAAGTACAACCTGCCTTT GACACTGCTTACTTCCGTGCCCTGACTGGCTTAATCTGA

Peptide Sequence

PEP ID	Os08t0113300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:715643:720168:1 gene:Os08g0113300 transcript:Os08t0113300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 68, U-box protein 68 description:Similar to STIP1 homology and U box-containing protein 1. (Os08t0113300-01)
Sequence	MSPAADSAASKRQAELLKQEGNAFFKKDRISAAIDAYTGAIALCPKVAVYWTNRALCYKR RNEWVRAEEDCRTAIQLDSHSVKAHYMLGLALLNKDELAEGIKELEKSLELGRGAHPASY MVEEIWQELSKAKYIEWENLSSERVRQLHKLKEACKEALRNYNSLDNPPAYVPEEQLNEL EEVFRNARKSDIPTEVQPAFDTAYFRALTGLI

Transcript Sequence

Transcript ID	Os08t0113300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:715643:720168:1 gene:Os08g0113300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 68, U-box protein 68 description:Similar to STIP1 homology and U box-containing protein 1. (Os08t0113300-01)
Sequence	ACGATCTTCTAGAAGCGATTCGCGCGCGCCGCCGCCTCCTCCCCTCCCCTTCCCCGGAGC GAAGCCGCCCCGCCGGGGGGGATGTCGCCGGCGGCGGACAGCGCGGCGTCGAAGCGGCAG GCGGAGCTGCTCAAGCAGGAGGGCAACGCCTTCTTCAAGAAGGACCGCATCAGCGCCGCC ATCGACGCCTACACCGGGGCCATAGCTCTCTGCCCAAAGGTTGCAGTATATTGGACCAAC CGAGCACTTTGCTACAAGAGGCGGAATGAGTGGGTTAGGGCTGAGGAAGATTGTAGAACA GCTATTCAGCTTGACAGCCACTCTGTTAAGGCACATTACATGCTCGGGCTTGCACTTCTC AACAAGGACGAATTGGCCGAGGGAATAAAAGAACTAGAGAAGTCGTTGGAGCTTGGAAGG GGTGCACATCCAGCAAGTTACATGGTTGAAGAGATCTGGCAAGAGCTTTCTAAAGCAAAA TACATAGAATGGGAAAATTTATCAAGCGAACGAGTCCGTCAATTGCATAAGCTGAAGGAA GCATGTAAAGAAGCTCTTAGGAATTATAACAGCCTTGACAATCCTCCTGCATATGTCCCC GAGGAACAGCTAAATGAGCTTGAGGAAGTTTTTCGGAATGCCAGGAAGTCTGATATTCCA ACAGAAGTACAACCTGCCTTTGACACTGCTTACTTCCGTGCCCTGACTGGCTTAATCTGA AAAGAAAAGAACTATTTTATATGCAGGTTCCTGATCATCTCTGCTGCAAAATTACTCTTG ATATTTTCAGAGACCCGGTGATAACCCCAAGTGGAATCACGTATGAGAGGGCGGTGATTC TTGATCATCTTCATAGGGTGGGGAAGTTTGATCCTGTGACCCGTGAGACACTTGAACCAC ACCAACTGGTTCCTAACCTTGCCATCAAGGAAGCTGTCCATGCATTTTTGAGTGAACATG GTTGGGCTTACAGGATGAGATGACTACTTTGAATTACACCTGGGCTTGGAGCTTTGGAGG CAACATTTCAGATTGCAATATACATGTTTCGGTTAGTCAACTTAAATGTGTCATTTTGTT TATCTTTACATATTTATTGGTGGAAAAGGTTTTACCTGGGATGGCTGTGTACAGATTCCC CTTCTCTAGCTATCCCTCCTCTCTACTCTGTTCATGTGTAATGCTTGGTATCAGATTATC ACTTATCCACAGTAAAAGAAAATTAAAGTGGCTGTC