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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0112800-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:682645:684136:-1 gene:Os08g0112800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 6 description:Rickettsia 17 kDa surface antigen family protein. (Os08t0112800-01)
Sequence

ATGGGGATCCACGAGCACGTCGAGGGGATCAAGGCGCACTGGGCGAAGAACTTCTCCTTC
CTCGACTACTTCAAGAAGGTCTACGGCCGGGACAAGCCCCTCCCCAAGTGGACCGATGCC
GACGTCGACGAGTTCATCGCCTCCGATCCCGTCTACGGCCCGCAGCTCAAGGCGATGAGG
GAATCCAGGAAGTTCGCGCTCGGCGGGGCTCTCGTCGGCGGCGCGCACCTCGGCGGCATC
GCCCTCAAGTACTCCAAGGCCCCGCACGGTGTCGTCCTGGCCACCGGCTTCGGGGCGATC
TGCGGCGCCGTCGTCGGATCGGAGGTGGCGGAGCACTGGTACCAGCTCTACAAGACGGAC
AAGCAGGGGGCCAACCTAAGGTTCATCTACTGGTGGGAGGACAAGGTCGCAGGAAACCAG
AAAAGTTGA

Peptide Sequence

PEP ID

Os08t0112800-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:682645:684136:-1 gene:Os08g0112800 transcript:Os08t0112800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 6 description:Rickettsia 17 kDa surface antigen family protein. (Os08t0112800-01)
Sequence

MGIHEHVEGIKAHWAKNFSFLDYFKKVYGRDKPLPKWTDADVDEFIASDPVYGPQLKAMR
ESRKFALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWYQLYKTD
KQGANLRFIYWWEDKVAGNQKS

Transcript Sequence

Transcript ID

Os08t0112800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:682645:684136:-1 gene:Os08g0112800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 6 description:Rickettsia 17 kDa surface antigen family protein. (Os08t0112800-01)
Sequence

AGGTAGAAGCCAAACGCGAGGCGAAACCACCACACCTCACCGTCGAATCGAATCCAAGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGATGGGGATCCACGAGCACGTCGAGGGGATCAA
GGCGCACTGGGCGAAGAACTTCTCCTTCCTCGACTACTTCAAGAAGGTCTACGGCCGGGA
CAAGCCCCTCCCCAAGTGGACCGATGCCGACGTCGACGAGTTCATCGCCTCCGATCCCGT
CTACGGCCCGCAGCTCAAGGCGATGAGGGAATCCAGGAAGTTCGCGCTCGGCGGGGCTCT
CGTCGGCGGCGCGCACCTCGGCGGCATCGCCCTCAAGTACTCCAAGGCCCCGCACGGTGT
CGTCCTGGCCACCGGCTTCGGGGCGATCTGCGGCGCCGTCGTCGGATCGGAGGTGGCGGA
GCACTGGTACCAGCTCTACAAGACGGACAAGCAGGGGGCCAACCTAAGGTTCATCTACTG
GTGGGAGGACAAGGTCGCAGGAAACCAGAAAAGTTGAGTGGTGTCTATCTGGTCCAGCAG
CTTGGCAAGAGTGATGTCCCCCCGCTGGGATTTTTAGTTGCTCATTCCTAGTATTTCCAA
ATAAGGTGTGTATTGGTTGTGACGATTACGCAGATGGAGTATGTTTCCTTTTGCTAGTAC
CGTGAGCTCTGTCTGTTCACAGCCTGAACAACAACTTTTGTGCTCTGAATGGTTCACAAA
CTAAATGCTGATCTTTACCGGTATCTGTTGATCTTTGTCCATTAAAGATTACTTTGCATA
TTGTAAGTACTGCTTTACCTTGAAGATAATAAGGCTACATAACGTAACC