Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0110800-04
CDS Infomation	cds chromosome:IRGSP-1.0:8:574335:578313:1 gene:Os08g0110800 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology, type 1, subgroup domain containing protein. (Os08t0110800-01);Hypothetical conserved gene. (Os08t0110800-02);K Homology, type 1, subgroup domain containing protein. (Os08t0110800-03);Conserved hypothetical protein. (Os08t0110800-04);Hypothetical conserved gene. (Os08t0110800-05)
Sequence	TTGATTCCCCAACATCCTCCGGAAGGTGTTACATTGACAGAAAGAACTGTACGTATTACT GGGAATAAGAAGCAGATAGAAGCGGCAAAAGATATGATTAAGCAAGCTATGAGTCAGACA TTTTCAAGACATGGGGCTCAATCTGGTGGATATGGTCAGCAAAACTACCGCCCTCAGGGT CATGGTGCAGCTTCTCAGTGGGGCCCACGTTCTCAACCCCAGCCTGGATATGGATATCCA CCAAGAGGGCCTCCACCTCAGAACATGCCATACTCCCAACCTTATGGTGGCTACCCGCAG CAGCCACCACCAAGAGGTGGCATGGGCTGGGATCAGAGGCAGGGCCCTCCACCCCATGCT TCCCACCATGGTGGCGGTTACGACTACTATAAACAGGGTTCTCAACCATATGAAGGCCAG CCACCAAATTACCCTCCTGGGCCTGGAAACTACAATAGTTATGGGCCATCACAGGGCCCA AATTATGGACAACCTCAGTATCCGCAGTCTGCACCTCCACAGAACTATGGGCCGGGTTAT GGTGATCCTAGATACAATGCTCCAGCACCAAACCAGCAGTACTATGGACAGCCTCCAGCG GGTCCACAGCAAGGCTACCCTCCACAGCAAGATCCCTACGCTAGGCCTTATGGTGGACCT GGACAATGGGCACCCAGAGGTGCACCAGCCGGAGATGGCACTTACCAGGCGCCACCACCT ACATCTTATGGCCCACCATCTCAGCAGCCTCCTGCTTATGGTCAGACATATGGGCCAACG ACTGGACCTGATGGGTATTCTCAGCAGAGTTACCCACAGCAAGGTGCACAAGCGCCAGCA ACATATGGTCAGAGTGCACCAGCAGGGCCAGGGTATGCTCAACAAGGCGCACAGCAAGGT GGCTATGCACAGTATCCTCAATCCCAACCAGCATATGGTGATCAAGCAGCTCAAAACAAT GCAAACTACGGCTACCAGGGTGCTCCAGCAGATCCCAACTATGGAAATGCCTACCCACAG GCAGGATACGGTTCTACTCCGGCTAGTGGCCAGGCTGGATATGCTGCTGCACCGGCTGCT GGCCAGCCAGGGTACGGTCAGCCAGGATACACTCAGCCACCTACAAATCCACCAGCTTAT GATCAGTCTGCCCAGCCACCAGCTCAGAGTGGCTATGCTGCACCTCCTGCAAACCCACAG CCTGCTGTTGCAAAGGGGGTGTCACCGCAGCCTGCTGGATATGGTGGACAATGGACCGCT TGA

Peptide Sequence

PEP ID	Os08t0110800-04
PEP Infomation	pep chromosome:IRGSP-1.0:8:574335:578313:1 gene:Os08g0110800 transcript:Os08t0110800-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology, type 1, subgroup domain containing protein. (Os08t0110800-01);Hypothetical conserved gene. (Os08t0110800-02);K Homology, type 1, subgroup domain containing protein. (Os08t0110800-03);Conserved hypothetical protein. (Os08t0110800-04);Hypothetical conserved gene. (Os08t0110800-05)
Sequence	LIPQHPPEGVTLTERTVRITGNKKQIEAAKDMIKQAMSQTFSRHGAQSGGYGQQNYRPQG HGAASQWGPRSQPQPGYGYPPRGPPPQNMPYSQPYGGYPQQPPPRGGMGWDQRQGPPPHA SHHGGGYDYYKQGSQPYEGQPPNYPPGPGNYNSYGPSQGPNYGQPQYPQSAPPQNYGPGY GDPRYNAPAPNQQYYGQPPAGPQQGYPPQQDPYARPYGGPGQWAPRGAPAGDGTYQAPPP TSYGPPSQQPPAYGQTYGPTTGPDGYSQQSYPQQGAQAPATYGQSAPAGPGYAQQGAQQG GYAQYPQSQPAYGDQAAQNNANYGYQGAPADPNYGNAYPQAGYGSTPASGQAGYAAAPAA GQPGYGQPGYTQPPTNPPAYDQSAQPPAQSGYAAPPANPQPAVAKGVSPQPAGYGGQWTA

Transcript Sequence

Transcript ID	Os08t0110800-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:574335:578313:1 gene:Os08g0110800 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology, type 1, subgroup domain containing protein. (Os08t0110800-01);Hypothetical conserved gene. (Os08t0110800-02);K Homology, type 1, subgroup domain containing protein. (Os08t0110800-03);Conserved hypothetical protein. (Os08t0110800-04);Hypothetical conserved gene. (Os08t0110800-05)
Sequence	AGTTGATTCCCCAACATCCTCCGGAAGGTGTTACATTGACAGAAAGAACTGTACGTATTA CTGGGAATAAGAAGCAGATAGAAGCGGCAAAAGATATGATTAAGCAAGCTATGAGTCAGA CATTTTCAAGACATGGGGCTCAATCTGGTGGATATGGTCAGCAAAACTACCGCCCTCAGG GTCATGGTGCAGCTTCTCAGTGGGGCCCACGTTCTCAACCCCAGCCTGGATATGGATATC CACCAAGAGGGCCTCCACCTCAGAACATGCCATACTCCCAACCTTATGGTGGCTACCCGC AGCAGCCACCACCAAGAGGTGGCATGGGCTGGGATCAGAGGCAGGGCCCTCCACCCCATG CTTCCCACCATGGTGGCGGTTACGACTACTATAAACAGGGTTCTCAACCATATGAAGGCC AGCCACCAAATTACCCTCCTGGGCCTGGAAACTACAATAGTTATGGGCCATCACAGGGCC CAAATTATGGACAACCTCAGTATCCGCAGTCTGCACCTCCACAGAACTATGGGCCGGGTT ATGGTGATCCTAGATACAATGCTCCAGCACCAAACCAGCAGTACTATGGACAGCCTCCAG CGGGTCCACAGCAAGGCTACCCTCCACAGCAAGATCCCTACGCTAGGCCTTATGGTGGAC CTGGACAATGGGCACCCAGAGGTGCACCAGCCGGAGATGGCACTTACCAGGCGCCACCAC CTACATCTTATGGCCCACCATCTCAGCAGCCTCCTGCTTATGGTCAGACATATGGGCCAA CGACTGGACCTGATGGGTATTCTCAGCAGAGTTACCCACAGCAAGGTGCACAAGCGCCAG CAACATATGGTCAGAGTGCACCAGCAGGGCCAGGGTATGCTCAACAAGGCGCACAGCAAG GTGGCTATGCACAGTATCCTCAATCCCAACCAGCATATGGTGATCAAGCAGCTCAAAACA ATGCAAACTACGGCTACCAGGGTGCTCCAGCAGATCCCAACTATGGAAATGCCTACCCAC AGGCAGGATACGGTTCTACTCCGGCTAGTGGCCAGGCTGGATATGCTGCTGCACCGGCTG CTGGCCAGCCAGGGTACGGTCAGCCAGGATACACTCAGCCACCTACAAATCCACCAGCTT ATGATCAGTCTGCCCAGCCACCAGCTCAGAGTGGCTATGCTGCACCTCCTGCAAACCCAC AGCCTGCTGTTGCAAAGGGGGTGTCACCGCAGCCTGCTGGATATGGTGGACAATGGACCG CTTGAGGTTTGTACCTCATTATTGACAGCAATGATCTAGTTGAAGACTATGTTTTGCCTC ATGATGCTGCCGCTTATATGAAGTAGGCGGTTGAATCCCCTTGGGATGTTCATTCAGTAA GCGGTAGACTTTTGATATGCCTATAAGGGATGTAACCCCTTGCCTCTCCAGTTGTTATAC CGGATCTCTGTAGTAGTTAGTAGTTTGTTAAGATGACATAAAACCTCCTGTTTAGTTTAA AAGTGAACCGAATTATGTGTTATTCTGCAGCATGTCGACTGATGTTTGGATGCTT