Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0110500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:551574:556921:1 gene:Os08g0110500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUB15, Plant U-Box 15, plant U-box-containing protein 15, U-box protein 15 description:U-box/ARM repeat E3 ligase, Stress response, Regulation of cell death, Blast disease resistance (Os08t0110500-01)
Sequence	ATGGAAAATTTCTCCCCGAGAACCCTGCTCAATAGTATCTTGCGTATCACTGTCTTAACC TCCGATGGCTCTACTGCAAGGCCCAAGCCCATTCAGAAGTACTGCCAAAATGTGTGTGAT ATCTCAAGCATTGTGAGCCCTCTCATAGAGGATCTATGTGAGTCTCCTGAAGAGCAACTC AATGAGGTGTTAAGGGAGCTTGGCACTGCTATTAACAGAGCTTCAGGGCTTATTGGGAAC TGGCAACAGACAACCAGCAAAATATATTTTATATGGCAGATTGAATCAGTAATCTCAGAT ATCCAGGGATGTTCTCTACAGCTGTGCCAGCTTGTTAACTCTCTATTACCTTCTTTGACT GGCCGTGCATGCACATGTATTGAGAAACTCCAAGACATAAATTATGAAAACATGTTTGAT CTGGTAAAGGAGTCTTCATTGGAGCTAGTTGAGACGGACACAACAAGTCCTGAGAATCTG TCGAGACTATCTAGTTCATTGAGTTTGTCAACTAACCTGGAATTTTACATGGAAGCTGTT TCCCTTGAGAATCTCAGAGCAAGGGCAATGCGGAGTGAGAACCGTGAAGAAATGGATCTG GCTGACAAGATGATCCCCCTGGTCAACTATATGCATGACCACCTTCTGAGGGAAACACAA CTGCTTAGCATCAATGGGGTGCCCATTCCTGCAGATTTTTGCTGCCCGCTGTCCCTAGAG CTGATGTCAGATCCTGTTATTGTAGCATCTGGTCAGACATATGAGCGGGTTTATATCAAG TTATGGCTTGATGAGGGTTTTACTATCTGCCCGAAGACACGCCAAAGACTTGGTCACTCC AATTTAATTCCAAATTACACCGTGAAAGCTTTGATAGCTAATTGGTGCGAATCACACAAC ATTAGGCTTCCTGATCCTATGAAATCCTTGAAATTGAACTTCCCTTTGGCTGCGTCTGCT CTCCAGGATTCGAGCACCACAGGAAGCAGCCCTCTACATCCTACTGTCGCTGCTAAGGGT AATATTCCTGGGTCCCCGGAAGCTGACCTTTATATGAGAAGCTTGAATAGAGCATCTCCT CCACACAGTGTAGTCCATCAGAATTCTCATGCGCATGTGAACCGTGCTGGTCATGAAGCC TCCATTAAGCAATCTTCAGAAAATGCTAATGGTTCTGCATCAGATGTTTCAAGGTTATCT CTTGCAGGTTCTGAAACAAGAGAGTCTAGTCTGGAAGAAAGAAATGCTGGTTCTATCGGT CAAACTTCAGAACAGTCAATTGAGGAAGCATTTCAAGCATCTAATTTGGACAGGGATTCA CATGACCATGTGGGTAGTTCTTCGGTGAATGGTAGCCTTCCAAATAGCGGTCAACTTGAT GCAGAATGTGACAATGGGCCAAGCGAAAGGACAAATTACAGTAGTGATGCATCTGGAGAA GTTACAGATGGGCCTTCAGCATCTTCTGCTCCTCAGAGGGAGCATCTAATCCCTTCTAGA TTGGCTGATGTTCGTAGTAGAGGCCAATTTGTTCGGCGACCATCTGAAAGGGGTTTCCCC AGAATAATATCTTCCTCATCCATGGATACACGGAGTGATCTTTCCGCCATCGAGAATCAG GTCCGCAAGTTAGTTGATGATTTAAGAAGTGATTCTGTAGATGTTCAAAGATCAGCGACA TCAGATATCCGCCTTTTAGCTAAGCACAACATGGAGAACAGGATCATCATTGCAAACTGT GGAGCTATAAACTTGCTGGTTGGTCTTCTTCATTCGCCAGATTCCAAAACCCAAGAGCAT GCCGTGACAGCCCTTCTGAATTTGTCAATCAATGATAATAATAAGATTGCCATTGCAAAT GCTGATGCTGTTGACCCCCTCATCCATGTCCTTGAGACTGGGAACCCTGAAGCCAAGGAG AATTCAGCGGCTACATTATTCAGTCTCTCGGTTATTGAAGAAAACAAAGTGAGGATTGGA AGATCCGGTGCCATCAAACCTCTCGTCGACCTACTAGGAAATGGGACCCCTCGAGGAAAG AAAGATGCAGCTACTGCATTGTTTAATTTATCCATATTACATGAGAACAAGGCGCGTATT GTGCAGGCTGACGCTGTGAAGTACCTAGTTGAACTTATGGACCCTGCTGCTGGAATGGTT GACAAAGCTGTGGCTGTTTTGGCAAACCTTGCTACCATACCAGAAGGGAGGACAGCAATT GGTCAAGCGCGTGGTATTCCAGCCCTTGTTGAAGTTGTTGAACTCGGTTCAGCAAGGGGG AAGGAAAATGCGGCTGCAGCATTGCTTCAGCTATGTACAAACAGCAGCAGATTTTGCAGT ATAGTTCTTCAAGAGGGTGCTGTGCCTCCTCTAGTTGCATTGTCACAGTCAGGCACGCCA CGGGCAAGAGAGAAGGCACAGGCTCTTCTCAGCTACTTTCGCAGCCAAAGGCACGGGAAT TCAGCAAGGAGATGA

Peptide Sequence

PEP ID	Os08t0110500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:551574:556921:1 gene:Os08g0110500 transcript:Os08t0110500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUB15, Plant U-Box 15, plant U-box-containing protein 15, U-box protein 15 description:U-box/ARM repeat E3 ligase, Stress response, Regulation of cell death, Blast disease resistance (Os08t0110500-01)
Sequence	MENFSPRTLLNSILRITVLTSDGSTARPKPIQKYCQNVCDISSIVSPLIEDLCESPEEQL NEVLRELGTAINRASGLIGNWQQTTSKIYFIWQIESVISDIQGCSLQLCQLVNSLLPSLT GRACTCIEKLQDINYENMFDLVKESSLELVETDTTSPENLSRLSSSLSLSTNLEFYMEAV SLENLRARAMRSENREEMDLADKMIPLVNYMHDHLLRETQLLSINGVPIPADFCCPLSLE LMSDPVIVASGQTYERVYIKLWLDEGFTICPKTRQRLGHSNLIPNYTVKALIANWCESHN IRLPDPMKSLKLNFPLAASALQDSSTTGSSPLHPTVAAKGNIPGSPEADLYMRSLNRASP PHSVVHQNSHAHVNRAGHEASIKQSSENANGSASDVSRLSLAGSETRESSLEERNAGSIG QTSEQSIEEAFQASNLDRDSHDHVGSSSVNGSLPNSGQLDAECDNGPSERTNYSSDASGE VTDGPSASSAPQREHLIPSRLADVRSRGQFVRRPSERGFPRIISSSSMDTRSDLSAIENQ VRKLVDDLRSDSVDVQRSATSDIRLLAKHNMENRIIIANCGAINLLVGLLHSPDSKTQEH AVTALLNLSINDNNKIAIANADAVDPLIHVLETGNPEAKENSAATLFSLSVIEENKVRIG RSGAIKPLVDLLGNGTPRGKKDAATALFNLSILHENKARIVQADAVKYLVELMDPAAGMV DKAVAVLANLATIPEGRTAIGQARGIPALVEVVELGSARGKENAAAALLQLCTNSSRFCS IVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR

Transcript Sequence

Transcript ID	Os08t0110500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:551574:556921:1 gene:Os08g0110500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUB15, Plant U-Box 15, plant U-box-containing protein 15, U-box protein 15 description:U-box/ARM repeat E3 ligase, Stress response, Regulation of cell death, Blast disease resistance (Os08t0110500-01)
Sequence	AGAAAGAGAAGAGAGAGAGATCCCCTCTCGCCTCGCCTCCTCCCTCCTGCCTCCTCGATC CCGATCTCTCCTCCTCCGCCGCCTCGCCGCCGCCGCCGTGGACGCCTCAAGGGCTGATGG AAAATTTCTCCCCGAGAACCCTGCTCAATAGTATCTTGCGTATCACTGTCTTAACCTCCG ATGGCTCTACTGCAAGGCCCAAGCCCATTCAGAAGTACTGCCAAAATGTGTGTGATATCT CAAGCATTGTGAGCCCTCTCATAGAGGATCTATGTGAGTCTCCTGAAGAGCAACTCAATG AGGTGTTAAGGGAGCTTGGCACTGCTATTAACAGAGCTTCAGGGCTTATTGGGAACTGGC AACAGACAACCAGCAAAATATATTTTATATGGCAGATTGAATCAGTAATCTCAGATATCC AGGGATGTTCTCTACAGCTGTGCCAGCTTGTTAACTCTCTATTACCTTCTTTGACTGGCC GTGCATGCACATGTATTGAGAAACTCCAAGACATAAATTATGAAAACATGTTTGATCTGG TAAAGGAGTCTTCATTGGAGCTAGTTGAGACGGACACAACAAGTCCTGAGAATCTGTCGA GACTATCTAGTTCATTGAGTTTGTCAACTAACCTGGAATTTTACATGGAAGCTGTTTCCC TTGAGAATCTCAGAGCAAGGGCAATGCGGAGTGAGAACCGTGAAGAAATGGATCTGGCTG ACAAGATGATCCCCCTGGTCAACTATATGCATGACCACCTTCTGAGGGAAACACAACTGC TTAGCATCAATGGGGTGCCCATTCCTGCAGATTTTTGCTGCCCGCTGTCCCTAGAGCTGA TGTCAGATCCTGTTATTGTAGCATCTGGTCAGACATATGAGCGGGTTTATATCAAGTTAT GGCTTGATGAGGGTTTTACTATCTGCCCGAAGACACGCCAAAGACTTGGTCACTCCAATT TAATTCCAAATTACACCGTGAAAGCTTTGATAGCTAATTGGTGCGAATCACACAACATTA GGCTTCCTGATCCTATGAAATCCTTGAAATTGAACTTCCCTTTGGCTGCGTCTGCTCTCC AGGATTCGAGCACCACAGGAAGCAGCCCTCTACATCCTACTGTCGCTGCTAAGGGTAATA TTCCTGGGTCCCCGGAAGCTGACCTTTATATGAGAAGCTTGAATAGAGCATCTCCTCCAC ACAGTGTAGTCCATCAGAATTCTCATGCGCATGTGAACCGTGCTGGTCATGAAGCCTCCA TTAAGCAATCTTCAGAAAATGCTAATGGTTCTGCATCAGATGTTTCAAGGTTATCTCTTG CAGGTTCTGAAACAAGAGAGTCTAGTCTGGAAGAAAGAAATGCTGGTTCTATCGGTCAAA CTTCAGAACAGTCAATTGAGGAAGCATTTCAAGCATCTAATTTGGACAGGGATTCACATG ACCATGTGGGTAGTTCTTCGGTGAATGGTAGCCTTCCAAATAGCGGTCAACTTGATGCAG AATGTGACAATGGGCCAAGCGAAAGGACAAATTACAGTAGTGATGCATCTGGAGAAGTTA CAGATGGGCCTTCAGCATCTTCTGCTCCTCAGAGGGAGCATCTAATCCCTTCTAGATTGG CTGATGTTCGTAGTAGAGGCCAATTTGTTCGGCGACCATCTGAAAGGGGTTTCCCCAGAA TAATATCTTCCTCATCCATGGATACACGGAGTGATCTTTCCGCCATCGAGAATCAGGTCC GCAAGTTAGTTGATGATTTAAGAAGTGATTCTGTAGATGTTCAAAGATCAGCGACATCAG ATATCCGCCTTTTAGCTAAGCACAACATGGAGAACAGGATCATCATTGCAAACTGTGGAG CTATAAACTTGCTGGTTGGTCTTCTTCATTCGCCAGATTCCAAAACCCAAGAGCATGCCG TGACAGCCCTTCTGAATTTGTCAATCAATGATAATAATAAGATTGCCATTGCAAATGCTG ATGCTGTTGACCCCCTCATCCATGTCCTTGAGACTGGGAACCCTGAAGCCAAGGAGAATT CAGCGGCTACATTATTCAGTCTCTCGGTTATTGAAGAAAACAAAGTGAGGATTGGAAGAT CCGGTGCCATCAAACCTCTCGTCGACCTACTAGGAAATGGGACCCCTCGAGGAAAGAAAG ATGCAGCTACTGCATTGTTTAATTTATCCATATTACATGAGAACAAGGCGCGTATTGTGC AGGCTGACGCTGTGAAGTACCTAGTTGAACTTATGGACCCTGCTGCTGGAATGGTTGACA AAGCTGTGGCTGTTTTGGCAAACCTTGCTACCATACCAGAAGGGAGGACAGCAATTGGTC AAGCGCGTGGTATTCCAGCCCTTGTTGAAGTTGTTGAACTCGGTTCAGCAAGGGGGAAGG AAAATGCGGCTGCAGCATTGCTTCAGCTATGTACAAACAGCAGCAGATTTTGCAGTATAG TTCTTCAAGAGGGTGCTGTGCCTCCTCTAGTTGCATTGTCACAGTCAGGCACGCCACGGG CAAGAGAGAAGGCACAGGCTCTTCTCAGCTACTTTCGCAGCCAAAGGCACGGGAATTCAG CAAGGAGATGACCTTCTCAGAATTTTTTGTAGGTATACATTAAGCATCTCCTCTGATTCC TTCAGGCATCGGCTTGGCTCCTCATATTGTTGTTGTTGGCTCTTGGGTGGCCCTATGTAT TGTTTATAGTCAAATTGAGATTGTGCTCATGTCATACAAATGTTGTGAGCGATGGGTTGG GTGTTTGTTGTTGAGATGGTGTAACTTTTGGTTCTCTTTTCTTTTTTGAAGGATATCTTT GTTCTTGTATAGGTTGTCCATTGGTAGCAACTTACCTATTCAATGGGATTTTGCTTTGTA TATGCTATTAACCCTGACATTATGATTGTTTTGAATGGTTGTAAAATTCGATATTGCCCT GCATGTTGTACC