Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0109100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:451143:458227:1 gene:Os08g0109100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os08t0109100-01);Similar to predicted protein. (Os08t0109100-02)
Sequence	ATGACGGCGGAGGCGGACGACCCGACGGCGGCGGAGACGCTGGAGAAGTTCCGCCTCTAC GAGACGCGCGCGAGGTTCTACCTGATCGGGACGTCGCGGGAGAAGCGGTGGTTCCAGGTG CTCAAGATCGACCGCTCCGAGCGCTCCGAGCTCAACATCAGCGAGGACCCCGTCTGGTAC TCCCAGCAGGAGGTCAAGAACCTCCTCCAGCGCATCTCCGAGGGCAACCGCTCCACTGGC GGCCTCACCTTCGTCACCAAGGCCTATGGCATCGCTGGTTGCATCAAGTTCTTGGAGTCA TATTATCTGATTTTGGTCACCAAGCGCTGCCAAATTGGTTGCATTTGTGGGCATCCTATT TACTGTATAGATGAGAGCCAGATGATAACCATTCCACACTCATCTGTGCAGACAGATGTT GCAACCTCTAAGAATGAGCTAAGGTACAAGAAACTTTTGGCTAGTGTTGATCTCACCAAG GATTTCTTCTATAGCTACACATACCCCATTATGCAGAGCCTGCAGCAGAATGTTACTTCT GCAGGGATGAAGGAAATGCCTTATGAAAATTTATTTGTCTGGAATACTTTCCTGACACAG CCGATTCGGTCAAGGTGCCGCAATACTCTCTGGACAGTAGCGCTGGTCCATGGGCATTTC AAGCAGGTCAAGCTATCAATATTTGGCAGGGAGCTAAATGTTGTTCTCATTTCTAGAAGA TCACGGCATTTTGCAGGGACACGGTATTTGAAAAGAGGCGTGAATGACCATGGAAAAGTT GCTAACGATGTTGAAACTGAGCAAATAGTCTTTGAGGAGGAAGCTGGTTCCTGGAAGGGA AGAATGAGTGCAGTAGTACAGATGCGGGGATCGATCCCTCTCTTTTGGTCGCAGGAGGCT GGCCGACTTAGTCCTAAGCCTGATATTATTGTGCAGAGATATGATCCTACATATGAAGCA ACTAAGTTACATTTTGATGATGTCGCTCAGCGCTATGGGCATCCTATCATAATACTTAAT TTAACAAAGACTTTTGAGAAAAGGCCCCGAGAGATGATGCTCAGGCGTGAATATTTTAAC GCAGTTGGATATCTTAATCAAAATGTCCCAGAGGAGAAGAAATTGAGATTCATCCACTGG GATTTCCATAAATTTGCAAAAAGTAAGTCTGCAAATGTTCTGGGTGTTTTAGGAGGTGTT GCTAGTGAAGCACTGGATCTCACTGGATTTTACTACAGTGGAAAGCCAAAAGTTCAAAAG AAAAGGTCAACTCAGCTTAGTAGAACTACCACCGCAAGGGATGGTTCCATTGATATAAGA GCTAGTTCTGGAGACCTTTCAAGGCTTTCGAGTAATGCAGATTCACTTGGTCCCACTGCT TCTCAAGATATAAGAAAAGATGACAGCAAACAAGAACTTCTTGGTGATGGTCCTTGTTAT CAAACTGGAGTTCTTCGTACAAATTGCATGGATTGCCTGGATCGTACAAACGTTGCTCAG TATGCTTACGGCCTTGCTGCTTTGGGAAGGCAGCTTCATGCAATGGGAGCGACTAATGTT TCAAAAATCCACCCAGATAGCAGCATTGCTTCAGCTTTAATGGATTTGTACCAGAGCATG GGTGATGCACTTGCTCATCAATATGGAGGCTCAGCAGCACATAACACAGTTTTCCCTGAG AGGCAAGGGAAGTGGAAGGCTACCACTCAGTCTCGGGAGTTCCTCAAATCAATTAGACGG TATTACAGCAATGCCTATACTGATGGTGAGAAACAAGATGCCATAAATCTATTTTTGGGT TATTTCCAACCTCAAGATGGAAAGCCTGCTCTCTGGGAATTAGACTCTGATTACTATCTT CATGTGACAACATATGGCGATGATCTTATATCTGATAGCTACCATATGACTGCACCTGGG GAATCTGGAGCTGCATTGAGCCCTGGAGCCACATTGAGCCCTGTTCCAGCATGTAAGGAG GACTTCTCAAGGATGAAACTTACTTCATTTGACAAACTTATTGAAAGGACTTGCAGTTCA ATAAGGAACGTGCGGCTTCACTGTGATGCTGATCTGAAACAGAGCGGAACTGTTGGAACT TCTGGAATGGCCCCAGATGCAGTGGAGATACAGCTTAGAACCCCAAACTGGTTGTTTGGT CAAAGAAAACACGCAGAGACTGTCCCAACAGTAAAAGTTATTCCAGTGGAAAATGCAAAT GAGGGTAACGGGGAGGACACGAATGTTTCTCTATGTGGGGAATTGAATTGGCTTTCGTCA GCAGATACATGCGAGGAGGACAATTTCAGAAGGTATCTTGCATTCACAACAGCGGACGTA GAGAATGGCTGGTATGGTGGAACACTGATATATGATCAAGATGAAAACAGCGGGGCTTAT AAACATTACTCTGAATTTTGCCAGGGCTCAGTCATGGATCCCCTCGAGCACGATCCCGAG AAAGAAATGCATTATGCGGAGGCCCTCAGCGTGGATATTGACATCACTGATGATGCAACG GTAGAAGCAGAAATGCAAGCTGCCCTGGACGATTACCAGATAATAGGTTCAGACCTCAGC ATTATTCCATCTTGTGGATCGCTCGCTGAAGATCCAAGCCAGCTGACGAGGTGGATCATT GGTGATGATAAACTGCAAGTCGCACAGTAG

Peptide Sequence

PEP ID	Os08t0109100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:451143:458227:1 gene:Os08g0109100 transcript:Os08t0109100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os08t0109100-01);Similar to predicted protein. (Os08t0109100-02)
Sequence	MTAEADDPTAAETLEKFRLYETRARFYLIGTSREKRWFQVLKIDRSERSELNISEDPVWY SQQEVKNLLQRISEGNRSTGGLTFVTKAYGIAGCIKFLESYYLILVTKRCQIGCICGHPI YCIDESQMITIPHSSVQTDVATSKNELRYKKLLASVDLTKDFFYSYTYPIMQSLQQNVTS AGMKEMPYENLFVWNTFLTQPIRSRCRNTLWTVALVHGHFKQVKLSIFGRELNVVLISRR SRHFAGTRYLKRGVNDHGKVANDVETEQIVFEEEAGSWKGRMSAVVQMRGSIPLFWSQEA GRLSPKPDIIVQRYDPTYEATKLHFDDVAQRYGHPIIILNLTKTFEKRPREMMLRREYFN AVGYLNQNVPEEKKLRFIHWDFHKFAKSKSANVLGVLGGVASEALDLTGFYYSGKPKVQK KRSTQLSRTTTARDGSIDIRASSGDLSRLSSNADSLGPTASQDIRKDDSKQELLGDGPCY QTGVLRTNCMDCLDRTNVAQYAYGLAALGRQLHAMGATNVSKIHPDSSIASALMDLYQSM GDALAHQYGGSAAHNTVFPERQGKWKATTQSREFLKSIRRYYSNAYTDGEKQDAINLFLG YFQPQDGKPALWELDSDYYLHVTTYGDDLISDSYHMTAPGESGAALSPGATLSPVPACKE DFSRMKLTSFDKLIERTCSSIRNVRLHCDADLKQSGTVGTSGMAPDAVEIQLRTPNWLFG QRKHAETVPTVKVIPVENANEGNGEDTNVSLCGELNWLSSADTCEEDNFRRYLAFTTADV ENGWYGGTLIYDQDENSGAYKHYSEFCQGSVMDPLEHDPEKEMHYAEALSVDIDITDDAT VEAEMQAALDDYQIIGSDLSIIPSCGSLAEDPSQLTRWIIGDDKLQVAQ

Transcript Sequence

Transcript ID	Os08t0109100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:451143:458227:1 gene:Os08g0109100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os08t0109100-01);Similar to predicted protein. (Os08t0109100-02)
Sequence	GCTTCAGTGCAGCCTGCGCCATCGTCGTCCTCCTCCTCCTTTCCTCTCTTCTCGCAACCC TTCCTCCTCCTCTCGCTCGCTCGCCGGAGGCGATGACGGCGGAGGCGGACGACCCGACGG CGGCGGAGACGCTGGAGAAGTTCCGCCTCTACGAGACGCGCGCGAGGTTCTACCTGATCG GGACGTCGCGGGAGAAGCGGTGGTTCCAGGTGCTCAAGATCGACCGCTCCGAGCGCTCCG AGCTCAACATCAGCGAGGACCCCGTCTGGTACTCCCAGCAGGAGGTCAAGAACCTCCTCC AGCGCATCTCCGAGGGCAACCGCTCCACTGGCGGCCTCACCTTCGTCACCAAGGCCTATG GCATCGCTGGTTGCATCAAGTTCTTGGAGTCATATTATCTGATTTTGGTCACCAAGCGCT GCCAAATTGGTTGCATTTGTGGGCATCCTATTTACTGTATAGATGAGAGCCAGATGATAA CCATTCCACACTCATCTGTGCAGACAGATGTTGCAACCTCTAAGAATGAGCTAAGGTACA AGAAACTTTTGGCTAGTGTTGATCTCACCAAGGATTTCTTCTATAGCTACACATACCCCA TTATGCAGAGCCTGCAGCAGAATGTTACTTCTGCAGGGATGAAGGAAATGCCTTATGAAA ATTTATTTGTCTGGAATACTTTCCTGACACAGCCGATTCGGTCAAGGTGCCGCAATACTC TCTGGACAGTAGCGCTGGTCCATGGGCATTTCAAGCAGGTCAAGCTATCAATATTTGGCA GGGAGCTAAATGTTGTTCTCATTTCTAGAAGATCACGGCATTTTGCAGGGACACGGTATT TGAAAAGAGGCGTGAATGACCATGGAAAAGTTGCTAACGATGTTGAAACTGAGCAAATAG TCTTTGAGGAGGAAGCTGGTTCCTGGAAGGGAAGAATGAGTGCAGTAGTACAGATGCGGG GATCGATCCCTCTCTTTTGGTCGCAGGAGGCTGGCCGACTTAGTCCTAAGCCTGATATTA TTGTGCAGAGATATGATCCTACATATGAAGCAACTAAGTTACATTTTGATGATGTCGCTC AGCGCTATGGGCATCCTATCATAATACTTAATTTAACAAAGACTTTTGAGAAAAGGCCCC GAGAGATGATGCTCAGGCGTGAATATTTTAACGCAGTTGGATATCTTAATCAAAATGTCC CAGAGGAGAAGAAATTGAGATTCATCCACTGGGATTTCCATAAATTTGCAAAAAGTAAGT CTGCAAATGTTCTGGGTGTTTTAGGAGGTGTTGCTAGTGAAGCACTGGATCTCACTGGAT TTTACTACAGTGGAAAGCCAAAAGTTCAAAAGAAAAGGTCAACTCAGCTTAGTAGAACTA CCACCGCAAGGGATGGTTCCATTGATATAAGAGCTAGTTCTGGAGACCTTTCAAGGCTTT CGAGTAATGCAGATTCACTTGGTCCCACTGCTTCTCAAGATATAAGAAAAGATGACAGCA AACAAGAACTTCTTGGTGATGGTCCTTGTTATCAAACTGGAGTTCTTCGTACAAATTGCA TGGATTGCCTGGATCGTACAAACGTTGCTCAGTATGCTTACGGCCTTGCTGCTTTGGGAA GGCAGCTTCATGCAATGGGAGCGACTAATGTTTCAAAAATCCACCCAGATAGCAGCATTG CTTCAGCTTTAATGGATTTGTACCAGAGCATGGGTGATGCACTTGCTCATCAATATGGAG GCTCAGCAGCACATAACACAGTTTTCCCTGAGAGGCAAGGGAAGTGGAAGGCTACCACTC AGTCTCGGGAGTTCCTCAAATCAATTAGACGGTATTACAGCAATGCCTATACTGATGGTG AGAAACAAGATGCCATAAATCTATTTTTGGGTTATTTCCAACCTCAAGATGGAAAGCCTG CTCTCTGGGAATTAGACTCTGATTACTATCTTCATGTGACAACATATGGCGATGATCTTA TATCTGATAGCTACCATATGACTGCACCTGGGGAATCTGGAGCTGCATTGAGCCCTGGAG CCACATTGAGCCCTGTTCCAGCATGTAAGGAGGACTTCTCAAGGATGAAACTTACTTCAT TTGACAAACTTATTGAAAGGACTTGCAGTTCAATAAGGAACGTGCGGCTTCACTGTGATG CTGATCTGAAACAGAGCGGAACTGTTGGAACTTCTGGAATGGCCCCAGATGCAGTGGAGA TACAGCTTAGAACCCCAAACTGGTTGTTTGGTCAAAGAAAACACGCAGAGACTGTCCCAA CAGTAAAAGTTATTCCAGTGGAAAATGCAAATGAGGGTAACGGGGAGGACACGAATGTTT CTCTATGTGGGGAATTGAATTGGCTTTCGTCAGCAGATACATGCGAGGAGGACAATTTCA GAAGGTATCTTGCATTCACAACAGCGGACGTAGAGAATGGCTGGTATGGTGGAACACTGA TATATGATCAAGATGAAAACAGCGGGGCTTATAAACATTACTCTGAATTTTGCCAGGGCT CAGTCATGGATCCCCTCGAGCACGATCCCGAGAAAGAAATGCATTATGCGGAGGCCCTCA GCGTGGATATTGACATCACTGATGATGCAACGGTAGAAGCAGAAATGCAAGCTGCCCTGG ACGATTACCAGATAATAGGTTCAGACCTCAGCATTATTCCATCTTGTGGATCGCTCGCTG AAGATCCAAGCCAGCTGACGAGGTGGATCATTGGTGATGATAAACTGCAAGTCGCACAGT AGCCCTTTTCTTTTTTTTGCCAAAGGGCTGTACAGATTTCTACAGCAGCCTTGTCATTCA TAAACCAGTTGCGTAGATACGAAGCTCTTACCATACAAAAGAGCTACCCCAGCCGGTGTT TTTATCCATTTTGCTGGGAGCAACCATGCATGCAAATAAACATTGCTGGAGGCAAGGTTA GCTTTATTTGTACATATAGGATTGGAGAGCATAAACATGGAGGGATAGCACTACTTGGGA GTATTAAGTGTATGAAGCAGATCAAAGCTGTATTTTTTTTTGTTGAATAAACTGTATGTG TGTAGTCTTCATTTGTTAAGATTTCTGGCCTGTATTTTCTTGGGTTGGAAAAATGAAATG CATTCACAAGTGGAGTGGTTAGTTATAGTTAAGACTTAGTAAGAGCTTGTCTCCCTAAAT GACGGGGGCATGAGTCGTTGTGCC