Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0109000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:445543:450382:1 gene:Os08g0109000 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS domain containing protein. (Os08t0109000-01)
Sequence

ATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCC
AAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATC
AAGCCGATAAAGAAGTATTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATG
CTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAAC
GGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAA
AAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTC
CCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGC
CCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAA
CCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAG
CCTGTTTCCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGAC
GTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGAT
CTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGG
GATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTA
CGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAG
GAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCG
GAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGC
CGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGC
TCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCC
GAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGG
GGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGA
GACTGA

Peptide Sequence

PEP ID

Os08t0109000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:445543:450382:1 gene:Os08g0109000 transcript:Os08t0109000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS domain containing protein. (Os08t0109000-01)
Sequence

MASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVM
LLEMLMNNCGEPIHKQVIDNGLLPILVKIVKKKTELPVREKIFLLLDATQTSLGGVKGKF
PQYYGAYYELVSAGVQFSNRPNVVVTQAQAPVPVPEPTIEPNNNSLSRRLDEGQKEVHAQ
PVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTSR
DEVVVSQAIELNEELHKVLVRHDALLSVQPTTTVASTLKEEEEEDAESLYRRLRKGKALS
EDYTDDSIPSFRSIPEDKMRRPLTIEPSNTDKKLGALNIRSPYPEARPDVLIPPPPAKHA
ERERFFREKSMDANLLGHLRGLSLHSRDGSSSCSGSTDYGD

Transcript Sequence

Transcript ID

Os08t0109000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:445543:450382:1 gene:Os08g0109000 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS domain containing protein. (Os08t0109000-01)
Sequence

TTAGCTTCTTCTTCCTGCTTCCTCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCC
CTCTCCCCTCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGA
AGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGA
TTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAA
GATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGC
CAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGAT
CAAGCCGATAAAGAAGTATTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTAT
GCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAA
CGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGA
AAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATT
CCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCG
CCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGA
ACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCA
GCCTGTTTCCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGA
CGTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGA
TCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAG
GGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGT
ACGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGA
GGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATC
GGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCG
CCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCG
CTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGC
CGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAG
GGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGG
AGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATA
TTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTT
CTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTT
ACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGAT
GCTTGTGTGGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCATCTCC
TTTTGGCTTTCTGATGTGTAGTAGTGGAGTAGTGCTGTGGGTTTTGCTTGTGTCAGAAGC
GTGCCATTCAGCTTTTAGCCAGCAGATAATGGATCAGTTGAGCCCCATGATCATGGTGGT
GTTGTGGGTCACTCTTCTCAATAGCATTGTAAAAGATTATGCCCATGACTATGAGACACC
TTTCTGGCAAGACCAAAGATCCACTAGTATCCTGGAGTAAGTATCTTTGAGACAATCTTG
AATGGTTAGGCTGGCTTGCCAAAGTATTTGACTCTACCTGCTAGTGGAGTAGAGATCTGG
CAGATTACTGGTATTATTTTATGTTCAAGTGGGTATGCATTCTTTGGAAGGCATACATTT
TTTTATTTTCTAGTTACATGGGGTAGCATATAGGAGCAAAGATTTGTGTTGAACTGTTTG
TAGAATTTGTGTAGCAAGGGAAATGACCAATTGGACAATAGGAAAACGATCATCAATC