Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0107600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:371457:373854:1 gene:Os08g0107600 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase domain containing protein. (Os08t0107600-01)
Sequence	ATGCCGATCGAGCTACCGCGGGGGCTGCCCTTCGCCGTGGACACGTGGACGGCCGCCTCC GCCGTCAAGCGCCACCGCTTCCTGACCCACGCCCACCGCGACCACATCGCCGGCATCACC GCCACCAACGTCGCCGCCGTCTACGCCTCCCGCCTCACCATCCTCATCGCCTGCCACATC TTCCCCCAGCTCGATCGCGCCGACGCCTTCGTGGAGGTGGAGCTGGGCGCGCCGGTGCTC GTCCCGGACCCCGACGGCGACTTCACCGTCACCGCCTTCGACGCCAACCACTGCCCCGGC GCCGTCATGTTCCTCTTCGAGGGCGCCTCCTTCGGCCGCGTCCTTCACACCGGCGACTGC CGCCTCACCCCCGACTTCCGCTTCCTCGCCGCCGACTACGTCTTCCTCGACTGCACCTTC GCCGCCTGCTCTCTCCACTTCCCCTCCAAGGACGACTCCATCCGCCAGGTCATCAATTGC ATCTGGAAGCACCCCAATGCACCGGTGGTTTATCTCGTGTCCGACATGCTTGGCCAAGAG GAGATACTCATGGAGGTGTCAAAGGTGTTTGGATCCAAGATTTATGTAGACAGGGACAAG AATTCAGAGTGTTATCACACCCTCTCCCTCGTCGCGCCGGAGATCCTCACCGACGACTCG TCGTCTCGCTTCCAGGTGATTGGTTTCCCCAGGTTGTCGGAGCGAGCAACGGAGATGCTC GCGTTGGCACGGGCGAAGCACCAGCCTGAGCCACTCATCATCAGGGCTTCTTCGCAATGG TACGCGTACTATGAGCCACCAGAGGGATCGACCAAGAGGAAACCGGCACTGACAGAGCCA ATGCGCGATGAATTCGGGGTGTGGCACGTCTGCTTCTCGATGCATTCGTCCCGCGAAGAG CTGGAGCAGGCGTTGCGGTTCATCCAGCCCAAATGGGTCATCTCCACAACCCCTCCATGT ATGGCGATCGAGCTGTCCTATGTCAAGAAGCACTGCTTCGCGTCCCGGTTACGCAATGAT GATCCCCTCTGGAAGCTGCTCAGGTTGTCTGATGGAAATTCTGCAGTTTCAGGATCACCA CTGGCTGTACCAACTGTAGAGATGATCAAGAAATGTGAGGAGGAAGAGGTCACTTGTTCT GTCAAGGACTCTTTCAGTTCTGATGGTATCAGGATGCGGGATCAAGAACCAACTCTGGAA GACTTTGAAATCAACGTGGAGCCACCTGTGACACTGTTCGGGATAGCGAGGTTTGGATTG ACAGAGGAACCTGAATTGTGGAAGGATGAGCATGAGAGTGTCGAAATCGACGAGCTTAAA GTGCAGATGGAGAATTCAGCTACAGAATGTGAGCAGTGGAAGGATGGCATATCTGTCTTA GGCTCTGAAGTAATTGATTCAGTTGAAATTGTGGCCAAAGAGCAGGACTCAGCAATAGAA TCTGAACAGTTGAAAGATTGCGAACCTAAAGATGGAACCAAAGCAACTGATGTAACTGAA GTTGAAGTGAATGAGCACACATCATGTACAGAATCTGTACTTTGGAAAATGGACAGAAGT GATGAGTGTGTGACAACTAAGAGAGGTGAATTTGAAGCTGAAGAACAGAAATTCACTGGC AGATACCAGTTTTGGAAAATATGCAAGCCCAAGGAGATGGAGGGTGCTAAATTGACTGTA CAAGGTAAAAACACTGTTGAAGCACTTGATCAGGTTTTGGCCATCGATCGTCTAGCCTAC TTGCATGACAACAACCAAGAGGTAACAAAAGAGGGTATTGCTCCATCAGAAACTGATCAG GAGAACTCTAAAGTTCCTGACAAGGGAAGCAGTGACTCCTCGAATGCTATTGGATCATCA AAAGGTCTGAATGCCAACCTGAGAAAGCTGTACAGGTCGATGAACGTGCCGGTTCCTCGT CCCCTGCCCTCATTAGTTGAGCTCATGGCAGCCTCAAAGCGACCAAGGGTTTCTCCTGCT GTGCAGCTGTAG

Peptide Sequence

PEP ID	Os08t0107600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:371457:373854:1 gene:Os08g0107600 transcript:Os08t0107600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase domain containing protein. (Os08t0107600-01)
Sequence	MPIELPRGLPFAVDTWTAASAVKRHRFLTHAHRDHIAGITATNVAAVYASRLTILIACHI FPQLDRADAFVEVELGAPVLVPDPDGDFTVTAFDANHCPGAVMFLFEGASFGRVLHTGDC RLTPDFRFLAADYVFLDCTFAACSLHFPSKDDSIRQVINCIWKHPNAPVVYLVSDMLGQE EILMEVSKVFGSKIYVDRDKNSECYHTLSLVAPEILTDDSSSRFQVIGFPRLSERATEML ALARAKHQPEPLIIRASSQWYAYYEPPEGSTKRKPALTEPMRDEFGVWHVCFSMHSSREE LEQALRFIQPKWVISTTPPCMAIELSYVKKHCFASRLRNDDPLWKLLRLSDGNSAVSGSP LAVPTVEMIKKCEEEEVTCSVKDSFSSDGIRMRDQEPTLEDFEINVEPPVTLFGIARFGL TEEPELWKDEHESVEIDELKVQMENSATECEQWKDGISVLGSEVIDSVEIVAKEQDSAIE SEQLKDCEPKDGTKATDVTEVEVNEHTSCTESVLWKMDRSDECVTTKRGEFEAEEQKFTG RYQFWKICKPKEMEGAKLTVQGKNTVEALDQVLAIDRLAYLHDNNQEVTKEGIAPSETDQ ENSKVPDKGSSDSSNAIGSSKGLNANLRKLYRSMNVPVPRPLPSLVELMAASKRPRVSPA VQL

Transcript Sequence

Transcript ID	Os08t0107600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:371457:373854:1 gene:Os08g0107600 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase domain containing protein. (Os08t0107600-01)
Sequence	GTCGCCGCCACCGCGGCCGCCGCCCGTCGCCGCGGTTGCGCTGTGGGCTGCGGTTGACGA GGAGGGAGGGAGGTCGCGATGCCGATCGAGCTACCGCGGGGGCTGCCCTTCGCCGTGGAC ACGTGGACGGCCGCCTCCGCCGTCAAGCGCCACCGCTTCCTGACCCACGCCCACCGCGAC CACATCGCCGGCATCACCGCCACCAACGTCGCCGCCGTCTACGCCTCCCGCCTCACCATC CTCATCGCCTGCCACATCTTCCCCCAGCTCGATCGCGCCGACGCCTTCGTGGAGGTGGAG CTGGGCGCGCCGGTGCTCGTCCCGGACCCCGACGGCGACTTCACCGTCACCGCCTTCGAC GCCAACCACTGCCCCGGCGCCGTCATGTTCCTCTTCGAGGGCGCCTCCTTCGGCCGCGTC CTTCACACCGGCGACTGCCGCCTCACCCCCGACTTCCGCTTCCTCGCCGCCGACTACGTC TTCCTCGACTGCACCTTCGCCGCCTGCTCTCTCCACTTCCCCTCCAAGGACGACTCCATC CGCCAGGTCATCAATTGCATCTGGAAGCACCCCAATGCACCGGTGGTTTATCTCGTGTCC GACATGCTTGGCCAAGAGGAGATACTCATGGAGGTGTCAAAGGTGTTTGGATCCAAGATT TATGTAGACAGGGACAAGAATTCAGAGTGTTATCACACCCTCTCCCTCGTCGCGCCGGAG ATCCTCACCGACGACTCGTCGTCTCGCTTCCAGGTGATTGGTTTCCCCAGGTTGTCGGAG CGAGCAACGGAGATGCTCGCGTTGGCACGGGCGAAGCACCAGCCTGAGCCACTCATCATC AGGGCTTCTTCGCAATGGTACGCGTACTATGAGCCACCAGAGGGATCGACCAAGAGGAAA CCGGCACTGACAGAGCCAATGCGCGATGAATTCGGGGTGTGGCACGTCTGCTTCTCGATG CATTCGTCCCGCGAAGAGCTGGAGCAGGCGTTGCGGTTCATCCAGCCCAAATGGGTCATC TCCACAACCCCTCCATGTATGGCGATCGAGCTGTCCTATGTCAAGAAGCACTGCTTCGCG TCCCGGTTACGCAATGATGATCCCCTCTGGAAGCTGCTCAGGTTGTCTGATGGAAATTCT GCAGTTTCAGGATCACCACTGGCTGTACCAACTGTAGAGATGATCAAGAAATGTGAGGAG GAAGAGGTCACTTGTTCTGTCAAGGACTCTTTCAGTTCTGATGGTATCAGGATGCGGGAT CAAGAACCAACTCTGGAAGACTTTGAAATCAACGTGGAGCCACCTGTGACACTGTTCGGG ATAGCGAGGTTTGGATTGACAGAGGAACCTGAATTGTGGAAGGATGAGCATGAGAGTGTC GAAATCGACGAGCTTAAAGTGCAGATGGAGAATTCAGCTACAGAATGTGAGCAGTGGAAG GATGGCATATCTGTCTTAGGCTCTGAAGTAATTGATTCAGTTGAAATTGTGGCCAAAGAG CAGGACTCAGCAATAGAATCTGAACAGTTGAAAGATTGCGAACCTAAAGATGGAACCAAA GCAACTGATGTAACTGAAGTTGAAGTGAATGAGCACACATCATGTACAGAATCTGTACTT TGGAAAATGGACAGAAGTGATGAGTGTGTGACAACTAAGAGAGGTGAATTTGAAGCTGAA GAACAGAAATTCACTGGCAGATACCAGTTTTGGAAAATATGCAAGCCCAAGGAGATGGAG GGTGCTAAATTGACTGTACAAGGTAAAAACACTGTTGAAGCACTTGATCAGGTTTTGGCC ATCGATCGTCTAGCCTACTTGCATGACAACAACCAAGAGGTAACAAAAGAGGGTATTGCT CCATCAGAAACTGATCAGGAGAACTCTAAAGTTCCTGACAAGGGAAGCAGTGACTCCTCG AATGCTATTGGATCATCAAAAGGTCTGAATGCCAACCTGAGAAAGCTGTACAGGTCGATG AACGTGCCGGTTCCTCGTCCCCTGCCCTCATTAGTTGAGCTCATGGCAGCCTCAAAGCGA CCAAGGGTTTCTCCTGCTGTGCAGCTGTAGGCCTATCATAGATTCATCTGTTGTTTCCGG CCTCTACTTTCAGTCATTATTTGAGTTAGACCTGTCATTCAAGAATACTTCCATTGTAAC AGCGATGCTATAGCATAATAATATACTATAATTGTTCTTAATAGCTAACTAATTTGAATG AAAATACCATGCTTAC