Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0107300-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:357115:360775:1 gene:Os08g0107300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os08t0107300-00)
Sequence	ATGCTTCCTCACGCCACCGCCCATCAGCCCACGCCCAGCCCGCGCCCGCGCCTCCTCCCC GTCGCCGCCGCCGCCCTCCTCCTCGCCTCCTCCTACCTCGCCCTCACCCGCCTCCCCGCC GCCGCGCCGCTCGCCGCCCTCGTCGCCCCTGCTACTGCACGCGTCGACGGGGACAGGGAC AGGGACAGCTGCGCGGGGTTCTACCGCGGGGGGTCGTCGGGGCGGCGCGCGGCGTCGGCG TCGGTGGAGGAGTTCGGGGCCGTGGGGGACGGGGTCACGTCCAACACGGCGGCGTTCCGG CGCGCGGTGGCGGCGCTGGAGGCGAGGGCGGGAGGCGGCGGCGCGAGGCTGGAGGTGCCG CCGGGGAGGTGGGTCACGGGGAGCTTTAACCTCACCAGCCGCTTCACGCTCTTCCTGCAC CACGGTGCAATCATCCTCGGCTCCCAGGATCCGGAAGAATGGCCTCTCATAGCCCCATTG CCGTCGTATGGGCGTGGGCGGGAAAGATTAGGACCACGCCACATCAGCCTCATCCATGGA GAGGGCCTGGATGATGTTGTTATTACGGGTAACAATGGGACCATAGATGGCCAAGGCAGG ATTTGGTGGGACCTATGGTGGAATCGAACGTTGAACCACACAAGAGGCCATCTTATTGAG CTAGTGGACTCAACCAACATCATGATCTCCAATATCACTCTACGCAACTCCCCGTTTTGG ACAGTGCATCCCGTCTACTGCAGAAACGTGGTGATAAGGAACTTAACTGTACTAGCTCCC TTGAATGCTCCAAACACTGATGGCATTGATCCAGATTCGAGTTCAGAAGTTTGTATTGAA GACTGTTACATTGAGAGTGGAGATGATCTGGTTGCTGTCAAGAGTGGCTGGGATCAGTAC GGCATCTCGGTAGGGAAACCAAGCTCAAACATCATCATCCAGAGGGTTTCAGGCACAACT CCAACATGCTCAGGTGTGGGATTTGGGAGCGAGATGTCCGGTGGAATATCAAATGTCATC ATTCGCGACCTGCACGTATGGAATTCCGCGCAAGCGGTGAGGATAAAAACCGATGTAGGA CGAGGTGGCTACATAACCAACATCACCATAGAGAATGTCAGGATGGAGAAGGTCAAGGTG CCTATAAGATTCAGCCGAGGTGCGGATGATCATTCAGATGACAAGTATGACCGAAGTGCG CTGCCAAAGATCAGTGATGTGCGCATCAGAGACGTTGTCGGTGTGGATTTACAGCGCGCA CCGATGCTGGAGGCAGTGCACGGTGCGGTGTATGAAGGGATTTGCTTCAGAAACGTTAGC TTGACAGTGATAAAGCGTCAGGATAGATGGCATTGCGAGTCTGTGTATGGAGAGGCACAT GATGTTCTTCCAGCGCCATGTGAAGAGTTTAGGAGAAATGGCTCGTCATCTTGGTGTGGC CATTCTTGA

Peptide Sequence

PEP ID	Os08t0107300-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:357115:360775:1 gene:Os08g0107300 transcript:Os08t0107300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os08t0107300-00)
Sequence	MLPHATAHQPTPSPRPRLLPVAAAALLLASSYLALTRLPAAAPLAALVAPATARVDGDRD RDSCAGFYRGGSSGRRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVP PGRWVTGSFNLTSRFTLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHG EGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFW TVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQY GISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVG RGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRA PMLEAVHGAVYEGICFRNVSLTVIKRQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCG HS

Transcript Sequence

Transcript ID	Os08t0107300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:357115:360775:1 gene:Os08g0107300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os08t0107300-00)
Sequence	ATGCTTCCTCACGCCACCGCCCATCAGCCCACGCCCAGCCCGCGCCCGCGCCTCCTCCCC GTCGCCGCCGCCGCCCTCCTCCTCGCCTCCTCCTACCTCGCCCTCACCCGCCTCCCCGCC GCCGCGCCGCTCGCCGCCCTCGTCGCCCCTGCTACTGCACGCGTCGACGGGGACAGGGAC AGGGACAGCTGCGCGGGGTTCTACCGCGGGGGGTCGTCGGGGCGGCGCGCGGCGTCGGCG TCGGTGGAGGAGTTCGGGGCCGTGGGGGACGGGGTCACGTCCAACACGGCGGCGTTCCGG CGCGCGGTGGCGGCGCTGGAGGCGAGGGCGGGAGGCGGCGGCGCGAGGCTGGAGGTGCCG CCGGGGAGGTGGGTCACGGGGAGCTTTAACCTCACCAGCCGCTTCACGCTCTTCCTGCAC CACGGTGCAATCATCCTCGGCTCCCAGGATCCGGAAGAATGGCCTCTCATAGCCCCATTG CCGTCGTATGGGCGTGGGCGGGAAAGATTAGGACCACGCCACATCAGCCTCATCCATGGA GAGGGCCTGGATGATGTTGTTATTACGGGTAACAATGGGACCATAGATGGCCAAGGCAGG ATTTGGTGGGACCTATGGTGGAATCGAACGTTGAACCACACAAGAGGCCATCTTATTGAG CTAGTGGACTCAACCAACATCATGATCTCCAATATCACTCTACGCAACTCCCCGTTTTGG ACAGTGCATCCCGTCTACTGCAGAAACGTGGTGATAAGGAACTTAACTGTACTAGCTCCC TTGAATGCTCCAAACACTGATGGCATTGATCCAGATTCGAGTTCAGAAGTTTGTATTGAA GACTGTTACATTGAGAGTGGAGATGATCTGGTTGCTGTCAAGAGTGGCTGGGATCAGTAC GGCATCTCGGTAGGGAAACCAAGCTCAAACATCATCATCCAGAGGGTTTCAGGCACAACT CCAACATGCTCAGGTGTGGGATTTGGGAGCGAGATGTCCGGTGGAATATCAAATGTCATC ATTCGCGACCTGCACGTATGGAATTCCGCGCAAGCGGTGAGGATAAAAACCGATGTAGGA CGAGGTGGCTACATAACCAACATCACCATAGAGAATGTCAGGATGGAGAAGGTCAAGGTG CCTATAAGATTCAGCCGAGGTGCGGATGATCATTCAGATGACAAGTATGACCGAAGTGCG CTGCCAAAGATCAGTGATGTGCGCATCAGAGACGTTGTCGGTGTGGATTTACAGCGCGCA CCGATGCTGGAGGCAGTGCACGGTGCGGTGTATGAAGGGATTTGCTTCAGAAACGTTAGC TTGACAGTGATAAAGCGTCAGGATAGATGGCATTGCGAGTCTGTGTATGGAGAGGCACAT GATGTTCTTCCAGCGCCATGTGAAGAGTTTAGGAGAAATGGCTCGTCATCTTGGTGTGGC CATTCTTGAGTCTAAGTGTACAGAAGCCGGAATTTTTTTGTGACAGACACTGGAATTCTT GCAATGAGGTGTCTACTTTTGCCATTATAGGATGATAATACAGAGGATTTCAGGATCATA CAGTCAGATTTTACAACTTAGCTGTATTCTTTAGTTTATCAGGTTGTATGTAGCACAAAG TTCAGGTTTTATCAATTGTAAAAGGGAGAATATATTCATGAAGAAATG