Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0105000-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:273672:274831:-1 gene:Os08g0105000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY HEADING DATE 3 description:Homeodomain (PHD) transcriptional regulator, Flowering promoter (Os08t0105000-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0105000-02);Similar to PHD-finger family protein. (Os08t0105000-03)
Sequence	GCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCG GGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGAT TCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGC GATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACC ATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATC TGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAAT GTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTG AAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAG GGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTG TCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGGTATGC GGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCCAGCTT GCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGG TGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAGGTTAT CACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACA TTTTGCAAGATCCGCAGGGCAGCGGAAGGAATGCATAAGTATGAGG

Peptide Sequence

PEP ID	Os08t0105000-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:273672:274831:-1 gene:Os08g0105000 transcript:Os08t0105000-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY HEADING DATE 3 description:Homeodomain (PHD) transcriptional regulator, Flowering promoter (Os08t0105000-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0105000-02);Similar to PHD-finger family protein. (Os08t0105000-03)
Sequence	ASGFSEAEVAEHRIEEISLPGAVHVVTKESTTTVQLAPCDSSHSTIPKRTVPPGRDLCPC DGCGTKVDVEEGLICDECDTMYHFACVKLLNPDIKQVPAIWHCSTCSFKKKELAADTTNN VAHDCLHGGNCVLCDQLELVKTEEEDPKLPIKIELAEEREGSSVSSMGEDNEPDLSTTAL SNLCKHCGTCEDDDKRFMVCGHPYCVYKFYHIRCLKTSQLAIEQQKKLGCWYCPSCLCRG CFQDKDDDQIVMCDGCDEGYHIYCMRPARNTIPKGKWYCTFCKIRRAAEGMHKYE

Transcript Sequence

Transcript ID	Os08t0105000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:273672:274831:-1 gene:Os08g0105000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY HEADING DATE 3 description:Homeodomain (PHD) transcriptional regulator, Flowering promoter (Os08t0105000-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0105000-02);Similar to PHD-finger family protein. (Os08t0105000-03)
Sequence	GTAATCTGTTGCTTTATCTTTCAATTAATGTCTCTAGCGTCGAGATGGTTATATTTTGAC AATTTGAGTTAAGATAAATCTATTACTGCACACTTGGCAACCATGCTGCAATTTGCAGGA TGCTTTAGTATATTGAAATCTTTCCTTTTATGCTGGGCATTACTAATGGATAAATTATTT TATAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTT TGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCAT GTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCC CTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTG ACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAG CAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGA ATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGC TGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAA GAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTG CCCTGTCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGG TATGCGGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCC AGCTTGCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCA GAGGGTGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAG GTTATCACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACT GTACATTTTGCAAGATCCGCAGGGCAGCGGAAGGAATGCATAAGTATGAGG