Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0104900-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:268733:271900:-1 gene:Os08g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0104900-01);Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0104900-02)
Sequence	ATGGAGGAAGCCAAGATGGGAGACGTTGCCACCATCCGAGCCGTTCTGGCGATCCTCCAA TGGTGGGGCTTCAACGTCACCGTCATCATCATGAACAAATGGATCTTCCAGAAATTGGAG TTCAAGTTCCCTCTTACTGTCTCGTGTGTCCACTTTATATGCTCTTCGATTGGAGCTTAC ATCGCAATCAAAATTCTCAAGATGAAACCACTGATTGAAGTTGCCCCAGAGGATCGGTGG AGAAGAATATTCCCAATGTCATTTGTGTTCTGCATAAACATTGTACTGGGAAATGTCAGC CTGAGATATATTCCAGTCTCCTTCATGCAGACCATAAAATCTTTCACCCCTGCAACGACA GTTATTCTGCAGTGGTTGGTCTGGAGGAAGTATTTCGAGTGGCGCATATGGGCTTCTCTG GTACCAATAGTGGGAGGAATCATGTTAACATCAATAACTGAGCTTAGTTTCAACATGTTT GGTTTTTGTGCTGCTATGGTTGGTTGCCTGGCAACATCTACCAAGACCATCCTTGCAGAG TCTCTACTCCATGGATACAAATTTGATAGCATTAACACTGTGTACTACATGGCGCCATTT GCAACCATGATACTGTCAGTACCAGCGATTGTGCTGGAAGGGAGTGGCGTCATCAATTGG CTCTACACGTATGATTCCATCGTCCCTGCACTGATCATCATCACCACCTCCGGAGTACTC GCATTTTGCCTCAACTTCTCCATCTTCTACGTCATCCATTCCACAACGGCTGTCACCTTT AACGTAGCCGGCAACCTGAAAGTTGCTGTGGCTGTGTTGGTGTCGTGGATGATCTTCCGG AACCCGATCTCCGCGATGAACGCTGTCGGGTGCGCAATCACGCTCGTCGGCTGCACCTTC TATGGCTATGTGAGGCATCTCATCTCGCAGCAGAGCGTTAATTCGAGCCCACGCACGCCG AGGAGCCGGATGGAGATGCTTCCCCTCGTAGGAGACAAGCAAGAGAAGATTTAA

Peptide Sequence

PEP ID	Os08t0104900-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:268733:271900:-1 gene:Os08g0104900 transcript:Os08t0104900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0104900-01);Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0104900-02)
Sequence	MEEAKMGDVATIRAVLAILQWWGFNVTVIIMNKWIFQKLEFKFPLTVSCVHFICSSIGAY IAIKILKMKPLIEVAPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT VILQWLVWRKYFEWRIWASLVPIVGGIMLTSITELSFNMFGFCAAMVGCLATSTKTILAE SLLHGYKFDSINTVYYMAPFATMILSVPAIVLEGSGVINWLYTYDSIVPALIIITTSGVL AFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISAMNAVGCAITLVGCTF YGYVRHLISQQSVNSSPRTPRSRMEMLPLVGDKQEKI

Transcript Sequence

Transcript ID	Os08t0104900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:268733:271900:-1 gene:Os08g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0104900-01);Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0104900-02)
Sequence	AACTGAATTAGTTCGATCGATGCAGGCAGGCAGGCCTTCTAGTTCTACAAAGATGCCTCT AATGGATCGTTTTCCTTTCCTATCGATGGCTTGATTGATACAAAGCCGGTTTTTTCACTC CTCGGGCGTGCGTTTCTTGACACCGGCCGGATTGATCTATCATCCATCCATCGAGTCGAG TCGAGATCGATCTTGATCTCGATCTCGATCGATGGAGGAAGCCAAGATGGGAGACGTTGC CACCATCCGAGCCGTTCTGGCGATCCTCCAATGGTGGGGCTTCAACGTCACCGTCATCAT CATGAACAAATGGATCTTCCAGAAATTGGAGTTCAAGTTCCCTCTTACTGTCTCGTGTGT CCACTTTATATGCTCTTCGATTGGAGCTTACATCGCAATCAAAATTCTCAAGATGAAACC ACTGATTGAAGTTGCCCCAGAGGATCGGTGGAGAAGAATATTCCCAATGTCATTTGTGTT CTGCATAAACATTGTACTGGGAAATGTCAGCCTGAGATATATTCCAGTCTCCTTCATGCA GACCATAAAATCTTTCACCCCTGCAACGACAGTTATTCTGCAGTGGTTGGTCTGGAGGAA GTATTTCGAGTGGCGCATATGGGCTTCTCTGGTACCAATAGTGGGAGGAATCATGTTAAC ATCAATAACTGAGCTTAGTTTCAACATGTTTGGTTTTTGTGCTGCTATGGTTGGTTGCCT GGCAACATCTACCAAGACCATCCTTGCAGAGTCTCTACTCCATGGATACAAATTTGATAG CATTAACACTGTGTACTACATGGCGCCATTTGCAACCATGATACTGTCAGTACCAGCGAT TGTGCTGGAAGGGAGTGGCGTCATCAATTGGCTCTACACGTATGATTCCATCGTCCCTGC ACTGATCATCATCACCACCTCCGGAGTACTCGCATTTTGCCTCAACTTCTCCATCTTCTA CGTCATCCATTCCACAACGGCTGTCACCTTTAACGTAGCCGGCAACCTGAAAGTTGCTGT GGCTGTGTTGGTGTCGTGGATGATCTTCCGGAACCCGATCTCCGCGATGAACGCTGTCGG GTGCGCAATCACGCTCGTCGGCTGCACCTTCTATGGCTATGTGAGGCATCTCATCTCGCA GCAGAGCGTTAATTCGAGCCCACGCACGCCGAGGAGCCGGATGGAGATGCTTCCCCTCGT AGGAGACAAGCAAGAGAAGATTTAATTGGCCACCAAATTAAAACAAGTTGATACTCAAAA GAGGAGGGAATTGTTGGTGCATGATCAATAGGAATAAAGGAGCATCATCTAACAGCTTTC AGGATTAATCCTGAGGCACTTTTGTCATAGAAAATTATTCAGAGTTTTCAGTTGAGTTGT TCGTATAGAGCTAATAGAACTTCCTTCTTGTCATCTGAACATGCTGGGGTGCTCCTCAGC TGTATCTCTCTCTCTCTCTCTCTTTCTATTCTTTTCTTCCTTTTTCTCACAGGATTAAAA GATTTTTGTTTGCTCGTAACTATGCTACTATTGCTACACATTTGATCACACAGCATTGTT CAGTTGACTATAGATATTATTATTATGTT