Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0103500-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:195908:200234:-1 gene:Os08g0103500 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0103500-01);PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0103500-02)
Sequence	ATGGCCCCGCGCCTCCTCCTCGCCCTCGCCCTCGTCCTGCTCGCCTCCGGCGCAAGCGCG GCGAGCGTGGGGGACACGTGCTCGTCGGAGGGAGACTGCGGCGCGGGGCTGCACTGCAGC GACTGCGGCGGCGGCGGCGGCGGCGACAAGACGTGCACGCGCGCCAAGCCCATCGACCCG CTCACGCACGGCACGGATCTCCCCTTCAACAACTACTCATGGCTGACGACGCACAACTCG TACGCCCTCGCCGGCTCCTCCTCCGCCACCGGCTCCGCCCTCATCACCCAAACCAACCAG GAGGACACCATCACCGCCCAGCTCAAGAATGGTGTTAGGGGCTTGATGCTTGACACTTAC GACTTCAATAATGATGTCTGGCTGTGCCACTCATTTCAAGGGAAATGCTTTAACTTCACA GCCTTTCAACCTGCCATCAATGTGTTGAAAGAAATCCGGACGTTCCTTGACGGTAACCCT TCAGAAGTAATCACAATTTTCTTGGAAGATTATACTGCTTCTGGGTCTCTGCCAAAAGTA TTCAATGCTTCTGGACTCATGAAGTATTGGTTCCCAGTGGCTAAAATGCCCAAGAGCGGT GGCGACTGGCCTCTACTCAAGGACATGATCAGCCAGAACGAGCGCCTGCTAGTCTTCACA TCAAAGAAATCAAAAGAAGCAAGCGAGGGGATCGCTTACGAGTGGAGTTACGTCGTGGAA AACCAATATGGAAATGAAGGGATGGTAGAGGGTAAATGCCCGAATCGTGCAGAGTCTCCA GCCATGGATTCCAAAAGCCAGTCTCTTGTCCTGATGAACTTCTTCACAACAGACCCAAGT CAAACAGGGGTTTGCGCAAACAACTCAGCGCCACTTGTTAGCATGCTGAAAACCTGCCAT GATCTCTCGGGCAATCGGTGGCCCAATTACATCGCTGTTGATTTCTACATGAGGAGCGAT GGTGGAGGAGCTCCCTTAGCTACTGACATCGCAAATGGTCATCTAGTATGTGGGTGTGAC AACATCGCATACTGCAAGGCGAATTCGACATTCGGGACATGTGTGATACCTCCACCTTCA CCGCCGCCGTCGCCTCGGAAGGCACCCAGCGGCGGCAAGGGCACAAGTGCAGGCGGCAGC TCCAGTTCCAGCGGCGCAATGGCTCGGGTTGTACTACCAAAGCTGAGCTTCTTCTTCGGA GTGGCACTTCTGATCCTGGTCATACTCTCTTATTAA

Peptide Sequence

PEP ID	Os08t0103500-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:195908:200234:-1 gene:Os08g0103500 transcript:Os08t0103500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0103500-01);PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0103500-02)
Sequence	MAPRLLLALALVLLASGASAASVGDTCSSEGDCGAGLHCSDCGGGGGGDKTCTRAKPIDP LTHGTDLPFNNYSWLTTHNSYALAGSSSATGSALITQTNQEDTITAQLKNGVRGLMLDTY DFNNDVWLCHSFQGKCFNFTAFQPAINVLKEIRTFLDGNPSEVITIFLEDYTASGSLPKV FNASGLMKYWFPVAKMPKSGGDWPLLKDMISQNERLLVFTSKKSKEASEGIAYEWSYVVE NQYGNEGMVEGKCPNRAESPAMDSKSQSLVLMNFFTTDPSQTGVCANNSAPLVSMLKTCH DLSGNRWPNYIAVDFYMRSDGGGAPLATDIANGHLVCGCDNIAYCKANSTFGTCVIPPPS PPPSPRKAPSGGKGTSAGGSSSSSGAMARVVLPKLSFFFGVALLILVILSY

Transcript Sequence

Transcript ID	Os08t0103500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:195908:200234:-1 gene:Os08g0103500 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0103500-01);PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0103500-02)
Sequence	AACCATCCATGGCCCCGCGCCTCCTCCTCGCCCTCGCCCTCGTCCTGCTCGCCTCCGGCG CAAGCGCGGCGAGCGTGGGGGACACGTGCTCGTCGGAGGGAGACTGCGGCGCGGGGCTGC ACTGCAGCGACTGCGGCGGCGGCGGCGGCGGCGACAAGACGTGCACGCGCGCCAAGCCCA TCGACCCGCTCACGCACGGCACGGATCTCCCCTTCAACAACTACTCATGGCTGACGACGC ACAACTCGTACGCCCTCGCCGGCTCCTCCTCCGCCACCGGCTCCGCCCTCATCACCCAAA CCAACCAGGAGGACACCATCACCGCCCAGCTCAAGAATGGTGTTAGGGGCTTGATGCTTG ACACTTACGACTTCAATAATGATGTCTGGCTGTGCCACTCATTTCAAGGGAAATGCTTTA ACTTCACAGCCTTTCAACCTGCCATCAATGTGTTGAAAGAAATCCGGACGTTCCTTGACG GTAACCCTTCAGAAGTAATCACAATTTTCTTGGAAGATTATACTGCTTCTGGGTCTCTGC CAAAAGTATTCAATGCTTCTGGACTCATGAAGTATTGGTTCCCAGTGGCTAAAATGCCCA AGAGCGGTGGCGACTGGCCTCTACTCAAGGACATGATCAGCCAGAACGAGCGCCTGCTAG TCTTCACATCAAAGAAATCAAAAGAAGCAAGCGAGGGGATCGCTTACGAGTGGAGTTACG TCGTGGAAAACCAATATGGAAATGAAGGGATGGTAGAGGGTAAATGCCCGAATCGTGCAG AGTCTCCAGCCATGGATTCCAAAAGCCAGTCTCTTGTCCTGATGAACTTCTTCACAACAG ACCCAAGTCAAACAGGGGTTTGCGCAAACAACTCAGCGCCACTTGTTAGCATGCTGAAAA CCTGCCATGATCTCTCGGGCAATCGGTGGCCCAATTACATCGCTGTTGATTTCTACATGA GGAGCGATGGTGGAGGAGCTCCCTTAGCTACTGACATCGCAAATGGTCATCTAGTATGTG GGTGTGACAACATCGCATACTGCAAGGCGAATTCGACATTCGGGACATGTGTGATACCTC CACCTTCACCGCCGCCGTCGCCTCGGAAGGCACCCAGCGGCGGCAAGGGCACAAGTGCAG GCGGCAGCTCCAGTTCCAGCGGCGCAATGGCTCGGGTTGTACTACCAAAGCTGAGCTTCT TCTTCGGAGTGGCACTTCTGATCCTGGTCATACTCTCTTATTAAGAGCAGACCCATTCAC TTGAGCTTGTGCTGTCTTTGTGCTCTGCTGGTACAAGCACATACTGTACTGCCATTCTGA GGCAAAATTTTCTGCTCTTTTTTTAGCCACCTGTTCCATTGGTTTGTAACTTCTTTTTCT TTTTTGTTAATGAGAGCTGTAGATGCCAGATTAGCTGGAGAAATTGTTCATGTGCCGAGC TGTAGATCATTCCTTTTATTTGAGGCAATATTTTTCTGCATATCAAGTGATCTTATTGCT CATAAAATAACTGCAATCGCATTGTAAAAAAATGTTGTGGTAAGACCTTTTACAGGTGC