Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0102700-05
CDS Infomation	cds chromosome:IRGSP-1.0:8:151908:153118:-1 gene:Os08g0102700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os08t0102700-01);Harpin-induced 1 domain containing protein. (Os08t0102700-02);Harpin-induced 1 domain containing protein. (Os08t0102700-03);Harpin-induced 1 domain containing protein. (Os08t0102700-04);Harpin-induced 1 domain containing protein. (Os08t0102700-05)
Sequence	ATGTCGATCAAGCACTGCGAGCAACACAAGGATTGCGAGCGGCAGCGCCTGTACCGGCGT TGCTGCGCGGCCATCTTCGGCATCCTTCTCCTCCTCCTCCTCATCGTCCTCATCGTCTGG CTCATCCTCCGCCCCACCAAGCCTCGCTTCTACCTCAACGACCTCACCGTCGTCTGCCTC AACGTCACCACCGGTGGTTCCTACGCCGGCGCCACCGCCTCCTCCGGCTACTTCTCCTTC CTCACCGTCACCATGCAGACCACCCTCGCCGCCCGCAACGGCAACGAGCGCGTGGGCATC TACTACGACCGCGCCGACGTGTACGCCGAGTACAAGGGCCTCCGCATCACCGTGCCGACG TCGCTGCCGCCGGTGTACCAGGGCCACCCGGACCTCACCGTCTGGTCCCCTTTCCTCTCC GGCAACAACGTCCAGCTCCCGCCCTACCTCGCCGTCTCCATCACCCAGGACGAGACCGCC GGCTACCTGCTCGTCACCATCCGCGTCGACGGCTGGATCCGCTACAAGGCCGGCGCCTTC ATCACCGGACACTACCACCTCCGCGTCAGGTGCCCCGCCCTGCTCATCGTCAACGACGGC CGGGGAAGCTACGGCTCCAACTCCGGCGGCGGCAACGGCTACTTCAGGTTCCAGCGAGCC GCCGCCTGCGTCGTCGACGTCTGA

Peptide Sequence

PEP ID	Os08t0102700-05
PEP Infomation	pep chromosome:IRGSP-1.0:8:151908:153118:-1 gene:Os08g0102700 transcript:Os08t0102700-05 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os08t0102700-01);Harpin-induced 1 domain containing protein. (Os08t0102700-02);Harpin-induced 1 domain containing protein. (Os08t0102700-03);Harpin-induced 1 domain containing protein. (Os08t0102700-04);Harpin-induced 1 domain containing protein. (Os08t0102700-05)
Sequence	MSIKHCEQHKDCERQRLYRRCCAAIFGILLLLLLIVLIVWLILRPTKPRFYLNDLTVVCL NVTTGGSYAGATASSGYFSFLTVTMQTTLAARNGNERVGIYYDRADVYAEYKGLRITVPT SLPPVYQGHPDLTVWSPFLSGNNVQLPPYLAVSITQDETAGYLLVTIRVDGWIRYKAGAF ITGHYHLRVRCPALLIVNDGRGSYGSNSGGGNGYFRFQRAAACVVDV

Transcript Sequence

Transcript ID	Os08t0102700-05
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:151908:153118:-1 gene:Os08g0102700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os08t0102700-01);Harpin-induced 1 domain containing protein. (Os08t0102700-02);Harpin-induced 1 domain containing protein. (Os08t0102700-03);Harpin-induced 1 domain containing protein. (Os08t0102700-04);Harpin-induced 1 domain containing protein. (Os08t0102700-05)
Sequence	TAGATATATAATGTCGATCAAGCACTGCGAGCAACACAAGGATTGCGAGCGGCAGCGCCT GTACCGGCGTTGCTGCGCGGCCATCTTCGGCATCCTTCTCCTCCTCCTCCTCATCGTCCT CATCGTCTGGCTCATCCTCCGCCCCACCAAGCCTCGCTTCTACCTCAACGACCTCACCGT CGTCTGCCTCAACGTCACCACCGGTGGTTCCTACGCCGGCGCCACCGCCTCCTCCGGCTA CTTCTCCTTCCTCACCGTCACCATGCAGACCACCCTCGCCGCCCGCAACGGCAACGAGCG CGTGGGCATCTACTACGACCGCGCCGACGTGTACGCCGAGTACAAGGGCCTCCGCATCAC CGTGCCGACGTCGCTGCCGCCGGTGTACCAGGGCCACCCGGACCTCACCGTCTGGTCCCC TTTCCTCTCCGGCAACAACGTCCAGCTCCCGCCCTACCTCGCCGTCTCCATCACCCAGGA CGAGACCGCCGGCTACCTGCTCGTCACCATCCGCGTCGACGGCTGGATCCGCTACAAGGC CGGCGCCTTCATCACCGGACACTACCACCTCCGCGTCAGGTGCCCCGCCCTGCTCATCGT CAACGACGGCCGGGGAAGCTACGGCTCCAACTCCGGCGGCGGCAACGGCTACTTCAGGTT CCAGCGAGCCGCCGCCTGCGTCGTCGACGTCTGATCCATCCATCCATCTCCTCATCCTCC TCTCATGCATCCAACAAATCATATCATCCTTAATTAATTCTCCTCCTTCCATATATAATT GCTTGCTTAATTGATCGATCTACATTCTACAAGCACAGCCCTGATGAAGAAGCTATATAA TTAAAAGCTCAGCTCAACTGATCGAGTGAGGATCGGAGTAATCTTGCATATATGCCTGCC ACCAGTGGTTTTATGTATTTACAGTACGAATTAATTTGACCTTTTTCTTACTTAATTTTC ATGCCTGTGTTTTTTTTGGTACTACGTACAGTGCCATGCTTGTGGCTAGCTGCATGGTTC AGGTGTACAGCTACTTGTAGTAATAATTCGCATATAGAGAGGGGATAATTAAGCAATTGC TACAATCTTGTAATTACTACTAGAATATATAATAATTGTACTTATCTTCACATGCATACT ACATAGTTGCAACATTGTAATCAATTAATGTTCTGTTCATTTTTCAACAAAGAGTGTTCG TCTTCACCTTC