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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0102400-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:138407:139410:1 gene:Os08g0102400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 28, ovate family protein 25, OVATE-domain containing protein 25 description:Hypothetical conserved gene. (Os08t0102400-00)
Sequence

ATGGTGAATAGGAAGAAGAAGAAGACCAAGCTTGGTATCACCTCTCTTCTCTTCAGCAGC
AGCAGCAGCAGCGGCAGGGACACATCCACTACTACTAGTGGCTTGCCGTATTCGTATTCG
TCGTGCTCCAATATGTCGTCGTCGTCGTCGGCGGCGGCGGCGGCGTGGCAATGGCCATCC
TGCAAGCAGCCGAGGACACTCTCCTTCAGGCAGCAGCAGCAGACGATGATGAAGACCATG
AACTCCGCTTACTTATCCGCGGGCTTCTCCTTCGCCTCTCGAGACAGCCACAGCTCCACC
TGCAGCTGCTGCAGGAGCAGGACGGCGTCCGACGCCTCGGCCTCCGCCGACGCCGTCACC
CGCGCGCTGCGCTCCGACCGCCTCTTTTTTGACCCTGACGCGTCCCCGGCCGCCGCCGCC
GACCTCAAGCTCAACAAGGCCAAGGCCAATAAGACGAAGAAGAAGGTGGAGGCGTTCGGC
GGGGCGACGGCGATGACCATCGAGTCGTCGAACCCGTACCGCGACTTCCGGGAGTCGATG
GAGGCGATGGTGACTAGCGGCGGCGGCGGCGGCGGCGCTGATGACTGGCGGTGGCTGGAG
GAAATGCTGGGGTGGTACCTCCGGGCCAACGTCAAGAGCACACACGGCCTCATCGTTGGC
GCCTTCCTCGATTTGCTCGTCTCTGCTGCCGCCTCGCCAGCTGCTTCTTCTTCTTCCTCC
TCTCCGGCGGCCAAAGGCAAATATTCCTCTTGCTGCAGCGCCTGTTCCTCTTCCTCCATC
AAGCTGGAAGAAGAACATCAGCTACGACATTACTAA

Peptide Sequence

PEP ID

Os08t0102400-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:138407:139410:1 gene:Os08g0102400 transcript:Os08t0102400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 28, ovate family protein 25, OVATE-domain containing protein 25 description:Hypothetical conserved gene. (Os08t0102400-00)
Sequence

MVNRKKKKTKLGITSLLFSSSSSSGRDTSTTTSGLPYSYSSCSNMSSSSSAAAAAWQWPS
CKQPRTLSFRQQQQTMMKTMNSAYLSAGFSFASRDSHSSTCSCCRSRTASDASASADAVT
RALRSDRLFFDPDASPAAAADLKLNKAKANKTKKKVEAFGGATAMTIESSNPYRDFRESM
EAMVTSGGGGGGADDWRWLEEMLGWYLRANVKSTHGLIVGAFLDLLVSAAASPAASSSSS
SPAAKGKYSSCCSACSSSSIKLEEEHQLRHY

Transcript Sequence

Transcript ID

Os08t0102400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:138407:139410:1 gene:Os08g0102400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 28, ovate family protein 25, OVATE-domain containing protein 25 description:Hypothetical conserved gene. (Os08t0102400-00)
Sequence

CTGAATTCTATCTTGTCTGATCCCATCCATATCAATACATTAGCTAGCCATGGTGAATAG
GAAGAAGAAGAAGACCAAGCTTGGTATCACCTCTCTTCTCTTCAGCAGCAGCAGCAGCAG
CGGCAGGGACACATCCACTACTACTAGTGGCTTGCCGTATTCGTATTCGTCGTGCTCCAA
TATGTCGTCGTCGTCGTCGGCGGCGGCGGCGGCGTGGCAATGGCCATCCTGCAAGCAGCC
GAGGACACTCTCCTTCAGGCAGCAGCAGCAGACGATGATGAAGACCATGAACTCCGCTTA
CTTATCCGCGGGCTTCTCCTTCGCCTCTCGAGACAGCCACAGCTCCACCTGCAGCTGCTG
CAGGAGCAGGACGGCGTCCGACGCCTCGGCCTCCGCCGACGCCGTCACCCGCGCGCTGCG
CTCCGACCGCCTCTTTTTTGACCCTGACGCGTCCCCGGCCGCCGCCGCCGACCTCAAGCT
CAACAAGGCCAAGGCCAATAAGACGAAGAAGAAGGTGGAGGCGTTCGGCGGGGCGACGGC
GATGACCATCGAGTCGTCGAACCCGTACCGCGACTTCCGGGAGTCGATGGAGGCGATGGT
GACTAGCGGCGGCGGCGGCGGCGGCGCTGATGACTGGCGGTGGCTGGAGGAAATGCTGGG
GTGGTACCTCCGGGCCAACGTCAAGAGCACACACGGCCTCATCGTTGGCGCCTTCCTCGA
TTTGCTCGTCTCTGCTGCCGCCTCGCCAGCTGCTTCTTCTTCTTCCTCCTCTCCGGCGGC
CAAAGGCAAATATTCCTCTTGCTGCAGCGCCTGTTCCTCTTCCTCCATCAAGCTGGAAGA
AGAACATCAGCTACGACATTACTAATATATAATTGATCCACACATCTACGGTAATTAATG
TTCGTTTAATTAATCAATTCAATGGATTAATTATATATTGGAGCGTGCATTTTATTAACT
ACTCCAGTGGTAGTACATCATATACTAGTATATTCGAATTTCAT