Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0102100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:115306:120980:-1 gene:Os08g0102100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicastrin family protein. (Os08t0102100-01)
Sequence	ATGTCGTCGTCGTCTCCCTCCGGCCACCTGCTCGCCTCTGTCTCCTCCGCCCTCGCCGTC CTCCTCCTCCTCCTCGCCTGCGTCGAGCTCGGCGACGCTGCTGCCGCCGTCGGAGTCTAC CGCCTCATCCAGTACGACCTCGCCGGCGCCCCTCTCGGCTCCCGCGCCGCCGCCCTCAAC CACCACGCCGCCGCCCTCCCTCTCCCCGCCGCCGCCGACCTCTCCCGCTCCGCCCTCGTC GCGCCGCTCCTCGATCTCCCGCTCGCCTTCCTCCGCGACTACTTGGCGGACAAAAAATAT CTGGGAGGCTTGCTCATTCTACTGCCTAAAAAACTAAACCATGAACCCAACAATGAAGAC AAGGGACAAGTAAAGGCTTCTCTGGCTGAGCTGGAACAGTTGCTCTTGCATCAACAAGTG CCATATCCGGTCTACTTCGCTTTCCAGGATGACCACTTTGATAACCTGCTGGCGGATATA CGTAAAATTGCCTCTTCAGGTCAGCCAGCCTCAGCAACAACAGGAGGTTACAAGCTTGTC GTGTCTACGCCGGAACCTAGAAAAGTGGCATCTCCGACCATTTCAAATATCCAGGGATGG TTACCTGGATTGAAAGGAGAGGGTGAAACTGAACAACTTCCAACTATTGCCATTGTTTCA AATTATGATACTTTCGGTGCTGCACCAGCACTTTCTGTGGGAAGCGACAGCAACGGGAGT GGAGCTGTGGCTCTTCTAGAGATTGCAAGACTGTTTTCACGCCTCTATTCAAATCCTAAG ACCAGAGGCAAGTACAACCTTCTGTTTGGCTTAACATCTGGTGGACCCTACAATTACAAT GGAACTAACAAGTGGCTTAGAAGTTTCGATCAGCGTGTGCGTGAGAGCATTGACTATGCA ATTTGCTTGAACAGCGTTGGTTCCTGGGACAATGAACTCTGGATGCATGTGTCAAAGCCA CCAGAAAACCCCTACATTAAACAAATCTTTGAAGATTTCTCTGATGTCTCTAAAGAGATG GGTGTTTCAGTTGGAATCAAGCACAAGAAGATTAATGTCTCAAATCCTAGGGTTGCGTGG GAACATGAGCAGTTCTCAAGATTTAGGGTGACTGCACTAACACTTTCGGAATTGTCCTCT CCTCCTGACTTTTTAGAAAGCACCGGTGGCCTTTATGACACTAGAGAATCAGCAGATGCT GAGTCAGTAATTAGAACTGTCAGATTAGTTTCTGAAAGTCTTGCGAGACACATCTATGGA CTAAAAGGAAAGAATATTGATGTTTTTGCGGAGAACAGCAGTTTAGCCATCAACCCTCAC TACATCCAGTCCTGGTTGGATCTTTTATCACGAACACCACGGGTTGCACCGTTTCTTCAG AAGAACGATCCCTTTATAGCAGCCCTAAAGAAGGAACTATCTGAGCACACTGCTGATGTC CACGTTCAAAGCGATGTTCTTGATGGCATGTTCACTTTCTATGATGCAACAAAGGCAACT CTAAATGTATATCAGGTTGCAAGTGTTACTTTTGATTTACTGTTCCTTCTGGTGATTGGC TCCTACCTAATTATTCTCTTCAGTTTCCTAGTAATCACTACACGGGGTCTTGATGATCTC ATCAACATATTCCGGCGACCACCATCACGCAAGGTCAAGGGGGCATAA

Peptide Sequence

PEP ID	Os08t0102100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:115306:120980:-1 gene:Os08g0102100 transcript:Os08t0102100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicastrin family protein. (Os08t0102100-01)
Sequence	MSSSSPSGHLLASVSSALAVLLLLLACVELGDAAAAVGVYRLIQYDLAGAPLGSRAAALN HHAAALPLPAAADLSRSALVAPLLDLPLAFLRDYLADKKYLGGLLILLPKKLNHEPNNED KGQVKASLAELEQLLLHQQVPYPVYFAFQDDHFDNLLADIRKIASSGQPASATTGGYKLV VSTPEPRKVASPTISNIQGWLPGLKGEGETEQLPTIAIVSNYDTFGAAPALSVGSDSNGS GAVALLEIARLFSRLYSNPKTRGKYNLLFGLTSGGPYNYNGTNKWLRSFDQRVRESIDYA ICLNSVGSWDNELWMHVSKPPENPYIKQIFEDFSDVSKEMGVSVGIKHKKINVSNPRVAW EHEQFSRFRVTALTLSELSSPPDFLESTGGLYDTRESADAESVIRTVRLVSESLARHIYG LKGKNIDVFAENSSLAINPHYIQSWLDLLSRTPRVAPFLQKNDPFIAALKKELSEHTADV HVQSDVLDGMFTFYDATKATLNVYQVASVTFDLLFLLVIGSYLIILFSFLVITTRGLDDL INIFRRPPSRKVKGA

Transcript Sequence

Transcript ID	Os08t0102100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:115306:120980:-1 gene:Os08g0102100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicastrin family protein. (Os08t0102100-01)
Sequence	TCGGCATCTGCATCTCCGCCCCCGCCCCCGTGGATCTGAAGCGGCGGAAGAGGGATGTCG TCGTCGTCTCCCTCCGGCCACCTGCTCGCCTCTGTCTCCTCCGCCCTCGCCGTCCTCCTC CTCCTCCTCGCCTGCGTCGAGCTCGGCGACGCTGCTGCCGCCGTCGGAGTCTACCGCCTC ATCCAGTACGACCTCGCCGGCGCCCCTCTCGGCTCCCGCGCCGCCGCCCTCAACCACCAC GCCGCCGCCCTCCCTCTCCCCGCCGCCGCCGACCTCTCCCGCTCCGCCCTCGTCGCGCCG CTCCTCGATCTCCCGCTCGCCTTCCTCCGCGACTACTTGGCGGACAAAAAATATCTGGGA GGCTTGCTCATTCTACTGCCTAAAAAACTAAACCATGAACCCAACAATGAAGACAAGGGA CAAGTAAAGGCTTCTCTGGCTGAGCTGGAACAGTTGCTCTTGCATCAACAAGTGCCATAT CCGGTCTACTTCGCTTTCCAGGATGACCACTTTGATAACCTGCTGGCGGATATACGTAAA ATTGCCTCTTCAGGTCAGCCAGCCTCAGCAACAACAGGAGGTTACAAGCTTGTCGTGTCT ACGCCGGAACCTAGAAAAGTGGCATCTCCGACCATTTCAAATATCCAGGGATGGTTACCT GGATTGAAAGGAGAGGGTGAAACTGAACAACTTCCAACTATTGCCATTGTTTCAAATTAT GATACTTTCGGTGCTGCACCAGCACTTTCTGTGGGAAGCGACAGCAACGGGAGTGGAGCT GTGGCTCTTCTAGAGATTGCAAGACTGTTTTCACGCCTCTATTCAAATCCTAAGACCAGA GGCAAGTACAACCTTCTGTTTGGCTTAACATCTGGTGGACCCTACAATTACAATGGAACT AACAAGTGGCTTAGAAGTTTCGATCAGCGTGTGCGTGAGAGCATTGACTATGCAATTTGC TTGAACAGCGTTGGTTCCTGGGACAATGAACTCTGGATGCATGTGTCAAAGCCACCAGAA AACCCCTACATTAAACAAATCTTTGAAGATTTCTCTGATGTCTCTAAAGAGATGGGTGTT TCAGTTGGAATCAAGCACAAGAAGATTAATGTCTCAAATCCTAGGGTTGCGTGGGAACAT GAGCAGTTCTCAAGATTTAGGGTGACTGCACTAACACTTTCGGAATTGTCCTCTCCTCCT GACTTTTTAGAAAGCACCGGTGGCCTTTATGACACTAGAGAATCAGCAGATGCTGAGTCA GTAATTAGAACTGTCAGATTAGTTTCTGAAAGTCTTGCGAGACACATCTATGGACTAAAA GGAAAGAATATTGATGTTTTTGCGGAGAACAGCAGTTTAGCCATCAACCCTCACTACATC CAGTCCTGGTTGGATCTTTTATCACGAACACCACGGGTTGCACCGTTTCTTCAGAAGAAC GATCCCTTTATAGCAGCCCTAAAGAAGGAACTATCTGAGCACACTGCTGATGTCCACGTT CAAAGCGATGTTCTTGATGGCATGTTCACTTTCTATGATGCAACAAAGGCAACTCTAAAT GTATATCAGGTTGCAAGTGTTACTTTTGATTTACTGTTCCTTCTGGTGATTGGCTCCTAC CTAATTATTCTCTTCAGTTTCCTAGTAATCACTACACGGGGTCTTGATGATCTCATCAAC ATATTCCGGCGACCACCATCACGCAAGGTCAAGGGGGCATAATAGAATAGATTGTGCTTT GTGTATTAGTATCCAGGAACGCGCTGCTAGTTAGAAGAGCTAGACACCAGGACGACAGGC GAGACGACCCAGCTCTCCACAGCAAACAGACTTGTAATTTCAAAATTTTCATGTTCGATA GCCAATGTGAGTGGCTTCAGATACTGCAAGGCAGAAACATCACGAATTTTGACTG