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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0101900-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:108447:109106:1 gene:Os08g0101900 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0497 membrane protein 2. (Os08t0101900-00)
Sequence

ATGAGCGGGAGCGACACCTCGGGCAGCGTCCACGTCGACGAGCACGGGCACGGGCACGGC
AAGGCTTCATCGTCATACGACGGTGCTGGTGCCCCGGCGCCGGCGCCGGCGCCTTTCCAG
GGGCATCGCAAGGCTGGCAGTGGTAGCAGCGACGTGCCGTTCCTGCTGCGCAGCGGCGGC
AGCGGTGGCGACGGCCTCCGGCGGTGCTTGGGTCTGATAGACTTTGTGCTGAGGGTGGCT
GCCTTCGGCCCCACGCTGGCCGCCGCCATCTCCATCGGCACCTCCGACGAGAGGCTCTCC
GTCTTCACCAACTACTTCCAGTTCCGCGCCAGATTCGACGACTTCCCGGCTTTCGAGTTC
TTCATTGTGGCGAATGCGATCGCGGCGGGGTACATGGTACTGTCGCTGCCCTTCTCCGCC
GCCACCATCATGAGCTCCAAGGCCACCGGTGTCAAGCTTCTGCTGCTCATCTGCGACACC
ATCATGGTGGGTTTACTGACGGCGGCAGCGTCTGCGGCGGCGGCGATGGTGTACGTGGCG
CACGAGGGCAACCTGCGCGCCAACTGGGTGCCC

Peptide Sequence

PEP ID

Os08t0101900-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:108447:109106:1 gene:Os08g0101900 transcript:Os08t0101900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0497 membrane protein 2. (Os08t0101900-00)
Sequence

MSGSDTSGSVHVDEHGHGHGKASSSYDGAGAPAPAPAPFQGHRKAGSGSSDVPFLLRSGG
SGGDGLRRCLGLIDFVLRVAAFGPTLAAAISIGTSDERLSVFTNYFQFRARFDDFPAFEF
FIVANAIAAGYMVLSLPFSAATIMSSKATGVKLLLLICDTIMVGLLTAAASAAAAMVYVA
HEGNLRANWVP

Transcript Sequence

Transcript ID

Os08t0101900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:108447:109106:1 gene:Os08g0101900 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0497 membrane protein 2. (Os08t0101900-00)
Sequence

ATGAGCGGGAGCGACACCTCGGGCAGCGTCCACGTCGACGAGCACGGGCACGGGCACGGC
AAGGCTTCATCGTCATACGACGGTGCTGGTGCCCCGGCGCCGGCGCCGGCGCCTTTCCAG
GGGCATCGCAAGGCTGGCAGTGGTAGCAGCGACGTGCCGTTCCTGCTGCGCAGCGGCGGC
AGCGGTGGCGACGGCCTCCGGCGGTGCTTGGGTCTGATAGACTTTGTGCTGAGGGTGGCT
GCCTTCGGCCCCACGCTGGCCGCCGCCATCTCCATCGGCACCTCCGACGAGAGGCTCTCC
GTCTTCACCAACTACTTCCAGTTCCGCGCCAGATTCGACGACTTCCCGGCTTTCGAGTTC
TTCATTGTGGCGAATGCGATCGCGGCGGGGTACATGGTACTGTCGCTGCCCTTCTCCGCC
GCCACCATCATGAGCTCCAAGGCCACCGGTGTCAAGCTTCTGCTGCTCATCTGCGACACC
ATCATGGTGGGTTTACTGACGGCGGCAGCGTCTGCGGCGGCGGCGATGGTGTACGTGGCG
CACGAGGGCAACCTGCGCGCCAACTGGGTGCCC