Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0101100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:71348:72715:-1 gene:Os08g0101100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:High mobility group protein B, High mobility group subgroup B protein description:High mobility group, HMG1/HMG2 domain containing protein. (Os08t0101100-01)
Sequence	ATGGCGGGGAAATCCGGCGCACGCACGAGGAAGCGCGTGGAGGCGACGGATTCCGCCGTC CTGAAGCGCGCGCGCGACGGCAGCGCCTTCACCCGCTGCGAGGCTTGCGGCAAGAGCGTC TCCGTGGTCCTCATCGACATGCACAACTGCAGCCTCGACGACAAGATCCGCATCAGCCTA GAGGCTCAGGTGGTGGAGCAGGCCGTGGAGGTGGCAGCGAGCAAGAAGAAGAGCGGCAAG AACAACAACAACAATGGCGAGGGGGCCAAAAAGGGCAAGCGCCCACCCACTGCCTTTTTC CTCTTCATGAGTGACTTCAGGAAGGAGTACAAGGCGGAGCACCCTGACAACAAGAGCGTC TCCGCTGTCGCCAAGGAAGGAGGGGAGAGGTGGAAATCCATGTCTGACGAGGACAAGAAG CCTTACTTGGACAAGGCTGCAGAGCTCAAGGCCGAGTACCACAATGGCGAGCGCAGCGAC GAGAACAATGTTGGTGGCAACGCAGGCGAGCAGGAGGTAGATCAGCCACCCAAGAAAGGC ACTGATGAAGACGACCAAGAAGATGAAGATGGTGCAGAGGAAGAGAAGAACGAGCTAGAC GACGACATCTAG

Peptide Sequence

PEP ID	Os08t0101100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:71348:72715:-1 gene:Os08g0101100 transcript:Os08t0101100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:High mobility group protein B, High mobility group subgroup B protein description:High mobility group, HMG1/HMG2 domain containing protein. (Os08t0101100-01)
Sequence	MAGKSGARTRKRVEATDSAVLKRARDGSAFTRCEACGKSVSVVLIDMHNCSLDDKIRISL EAQVVEQAVEVAASKKKSGKNNNNNGEGAKKGKRPPTAFFLFMSDFRKEYKAEHPDNKSV SAVAKEGGERWKSMSDEDKKPYLDKAAELKAEYHNGERSDENNVGGNAGEQEVDQPPKKG TDEDDQEDEDGAEEEKNELDDDI

Transcript Sequence

Transcript ID	Os08t0101100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:71348:72715:-1 gene:Os08g0101100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:High mobility group protein B, High mobility group subgroup B protein description:High mobility group, HMG1/HMG2 domain containing protein. (Os08t0101100-01)
Sequence	ATCTCCTCCAAATCCATAGCCCTCCTCCTCTCCTCTGTAATGGCGGGGAAATCCGGCGCA CGCACGAGGAAGCGCGTGGAGGCGACGGATTCCGCCGTCCTGAAGCGCGCGCGCGACGGC AGCGCCTTCACCCGCTGCGAGGCTTGCGGCAAGAGCGTCTCCGTGGTCCTCATCGACATG CACAACTGCAGCCTCGACGACAAGATCCGCATCAGCCTAGAGGCTCAGGTGGTGGAGCAG GCCGTGGAGGTGGCAGCGAGCAAGAAGAAGAGCGGCAAGAACAACAACAACAATGGCGAG GGGGCCAAAAAGGGCAAGCGCCCACCCACTGCCTTTTTCCTCTTCATGAGTGACTTCAGG AAGGAGTACAAGGCGGAGCACCCTGACAACAAGAGCGTCTCCGCTGTCGCCAAGGAAGGA GGGGAGAGGTGGAAATCCATGTCTGACGAGGACAAGAAGCCTTACTTGGACAAGGCTGCA GAGCTCAAGGCCGAGTACCACAATGGCGAGCGCAGCGACGAGAACAATGTTGGTGGCAAC GCAGGCGAGCAGGAGGTAGATCAGCCACCCAAGAAAGGCACTGATGAAGACGACCAAGAA GATGAAGATGGTGCAGAGGAAGAGAAGAACGAGCTAGACGACGACATCTAGGCCACCGGT CCAATGGATGGATGGATGGATAATTCCTTCTCTTTTTGTAAATGGCGGATCCATCACATT GCTAGTATGCTAGTGGGAGCAGCAGTATCGATTGATTCTGGTGGTGGTGATCTTCTAGTA CTAGAACTACTAGTGCTTGCAGTGTGACCTGCACATCAAGTGAATGAATGAATGAATGAT TAGACGACTTAATTATCCCTCTTTTTTTGGATTCGATTGGAGTGCAACTTCTTCCCCATT CCATTCTCAAGGGCTTCCTTCCTTTGCTGCTCTCTGTCTCTATATGTTGCTTCCTTGGTG AATTGACTCATGACTTGTATCTGATTTCATCAACTTAATTGAAACAACAAATGCTG