Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0100500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:36145:45629:1 gene:Os08g0100500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulation of nuclear pre-mRNA protein domain containing protein. (Os08t0100500-01);Conserved hypothetical protein. (Os08t0100500-02);Hypothetical conserved gene. (Os08t0100500-03)
Sequence	ATGGCTCCCGCCGGTAGGCGGGGCGCCAAGGCCCACAAGTGGACCACACAGCCGCAGCTC GGCGACCTCGTCCTCGCCAAGGTCAAGGGCTACCCCCCATGGCCGGCCAAGGTCAGCAAG CCGGAGGACTGGGACCAGATGCCGGTTCCGCGCAAGGTCTTTGTTGTCTTCTTCGGTACC AGAGAGATCGCTCACATCGCTTTGCCAGATCTTCAGCCGTTTACTGAGAATGCAAAGAGT GAGGTGATGGATCGATCTCGGAACAAGCAGTGCCCCAAAAAGTATATCGACAGTTTTGCT GAAGCTGTCGTGGAGATCTGCAAGGCCTATGATGATCTGCCAAAATCATCTGAAACTACG ACCTGTATGTTGCCTGATGATCAAAGTGAACAACCTACAGAGCACCTTGTAAAGTCACCC AATAATGATGAGGCTCCAAGATCGGGGCAAATGGAAGGTGATAGTCCTAGTGACAACTTA AATACATCAGGGTTAGGTTCAGGGACTGAGGTGGACATAAAAGATGGTTCTTGTGACATA AGGGATTCCTCTCTGGCAGCTGTTAAAAGGAAAAAGCCTAAGGATCTTGATCAACCCAAG AAAAAGAAACCGGTGACTTCTAAGTCAGCCATCAATATGCACCTTGAACAAGACTGTTCA GCAACCACTGTCCATGCAGAAAGAGAGCTTGAAGAACCAAAAGCTGAAAAGGAGATCAAT CCATCAGAATTCTTGACCTTGGACCCCACTGTACAAATAGTGTGCGCCCTTGAAGTACCC AAGAAATCTAAAGCCGCGAAACAGTCAAAGAATGCTGAAAGAAAGGACAACAAACGTGTT AATGTTGCTGATATTTCAGGGAGGACTACACCAGGAGCTGTACTTGACACCGAACTTAAA AGGAGTGCCGAGAAGGATAGCAAGGGTTTTAAAAAGTCTAAATTGATGATGAAACAATCA GTTTCCAATGAATCAGAGAAAATAGACCATAAACGAATAATGGTAGACAAATCTGACAAG CTGTTGGCTAGGAAATCATCTTCAGTCTTCTCTTCCAATAAGAAACCTCTCCCTGGTAGC GAGCAGCGCAAGCTGGACAATAGCACTGATATGCGTCCAGCAAAGAGGCCAAAATTGATG GACAGGGCCAATGAAACAGTTAAGACAGAAGCAAAGAGCGAGACCAGCTTACATGCTGAT AATGAAAAAGATAGTGCCTTGAAAATTGAAAAATCTATTCCTGCAGAAGCTGTAAGTAAC TCGGTTCCTAAGATTGGAGTGGGTGATGATTGGACCCGAAGATCAGGTAGTCTTTTATCA CCCCTAGCAAGGCTGCACTCTCAGGGATCAGAACCAGCATCTGGTTCAACTCAGTTAAGC GCTGTTGATACTGCTAAAAAAGTCTCCAGCTTGAAGGAGAATTTCTCGCGTGTTGGTAAG CCATTGGCAAAGCCCAGGAGAAGAGCATGCCGCTTTGGTGATGATGACGAGGAAGAACAA CGGACACCTCCTCATAAATCTTCTGTTAAATCCATCCCCATGCGTGGAGTCCCCACAGAG AAGTTCCAATCACAGACAGGGGTTCGTGGGATTTCTTCATCCCAAATTGGCAATGCTTCT GCAATGAAATTTGGTGTGGCAAGAGAAGAGAAACCTAAAAGCATTGGGAGGTCACCTGTG GAGCATGAGCCAGATTATACTTCACCAAATCAAGACAAAATGCATGGTAGACTACAGATA ATGGGGAAAAGGTCAACCACAAGCTCGGTTGACACTTCTGCTAGTCTGGGTAACAAAACT AACCTGGCAGATCGCAGATCCTCTGGGCAATTAAGAATGGCAGCATCCTCTGAAGTGAAG AAAACACAAGGAAGTTCTTCTAAACTATTGCACCAGACACCGGGGAACTTGCACTCTCAA AACCCTGATGACTCGGAAAAGAATGCACTGTTGTCTAAATCGGAAAACAGTAAGGCTAAG ACTAAATCTGGCACACAGATAACTGCAACTGTTGAGGGTCGGATAAGTACCGCTATGCAA GCTGAACGGATTGGGAAGATGGACCACTCCAAAGAGCAAAGATCAGATTTTGTTGATAAA GCAGCTTTTGCTGAACCTAATTCTGATCCTGTCAAGTCAATGAAGCATCTCATTGCAGCT GCTCAAGCAAGAAGGAATCTTATTGCGGCTGCTCAAGGAAAGTCTGATGGGTTATCTGCT GATAATACTGTTCTTTCCTCCACACCATATGGCTTGCCTGGACTAAGCCCTGGTCCTGTT TTTCACATTCCATCTGCATCTAGAATTATTCCAGAGAGTGATGGCATGCAGTTTCCGGAC TCCTTTTGTGCTATTACTGAACCTGGTCAACAAGTTGCTATGAAAAATCTACTGGAAATT GAGCATGAACATGGAAAGAGCCCCAAAACTAGGCAATCGAGCGATTCATTGAGTGGTGGA ACAGATGCAGCGATTGCACGTGATGCTCTGGAGGGTATGATAGAGACGCTTTCAAGGACA AAGGATAGTATAGGGCGTGCTACACGTCATGCAATAGAGTGCTCAAAATATGGCATCGCT GCAGAGATTGTGGAGCTTCTTGTGCTGAAATTAGAGAATGAGCCTAATTTGCATCGAAGA GTTGACCTCCTTTTTCTTATAGACTCCATAACTCAGTGTTCTCACTCTCAGAAAGGTGTT GCTGGCGTTTCATATGTTCCCACCGTTCAAGCTGCGCTACCTCGTCTCTTGGGCGCTGCT GCTCCACCAGGACCCGGTGCTCGTGAAAATCGACGACAGTGCCTCAAAGTTTTACGGTTA TGGCTTGAGAGAAAGATTATGCCAGAAGGCATACTTCGAAGATACATGGATGATATTGAG GTGCCAAATGATGATGCTAACACAGGTTTTCTGCTGAGGCGACCATCTCGAGCTGAACGC TCTGTAGATGATCCTATTAGGGAGATGGAAGGCATGCTTGTTGATGAGTATGGAAGCAAT GCAAACTTTGAGCTCTCTGGGATTCTATCATCCAATGTCTTTGAAAATGATGACGATTTC CCTGGATTATCACCAGCTATTTCACTGCCAGTTCAAAGTGGCAGGATGCAAGAAAATGAA CAAGCTATTGCACCAAATTTTGTTGAGGAAAACATTAGGTTACCAAAAGATGTGACTAGT GATGTTCCAATGGAAGATGCCTCTCTTTTACCAAGAGATAAGCAACAGACAGATGGAGCT ATCCCTGTTGTGCATGACTTACAGCATGAAATTGATCGAGAGCAGGCATTGGCTGATCAG AATGAACTTCCTCCTCTACCTGACGGTCCTCCACCGCTTCCATTAGATGCACCACCTCCC CCACCTCTGCCTGAGGGACCCCCACCGCTTCCATCAGATTCACCACCTTGCCAGCCTCCT TTGCCTCCTTCACCACCACCTGCTACACCGCCACCGCCACCACCACTTTCACCATCTTTG CCACCTCCGCCACCACCCCCACCTCTACCATCTGGCCCACCTCCTCAGCCTGCCCCACCA CCCCTGCCAATCCAGCCCCCACCTATTCCTCCCCCACCTGTTCCATCATCTCCGTCATCA TTGGGCTATCAGCCTCCTGCACCCGAATATTTCAGGGCTTCAAATAGCAACCAACTTAAC CAGATGGCAGGGAATGCATCAATTCAAGGAATTGGAAATATGACAAACTTCATTCCTGGT GGATCAGTGAACACTCAAGCTGCAGTTAATTTTACCCCATCAGTGCCACCAGATTATGGG AATAACAATCTATATATAAAACCACAAGGTTCTAATGGTAATTTTCAGTTTCGACCAACT GGTGTACCTTTTCAGCAAGGGACATTCAGTGCTTTTCCATCTGCACAAACACCACCAGTT CGTCCCCACACTCATCTTACACAAATGAACCCAGTGGGCCAACAAGCTGTACCTCCGTGC AATCCTTATGCTGTACAGTCCTTTCCAAATAATCAAAGTCAATATACATCTGACGAGCAA TGGCGAATGACATCTGGTAACTTCAGCCCAGATGATCAGCGCAATACTTGGTTACCAGGC GCCAGAGCATTATCTTGTGCAGAGGGGTCATTCATGCAGGATGGATATCCAAGGTCTAAC ATTGACAGATCTTCAATGAACCCTATGACTCATCAACGTCCTGTACTCAACCGTATGCCA TCTGGAGCACCTGTACCAGGACATGTTCCTCAGATGCTGCCGGCCAGACCTGATATTCAC ACATTTAATTGCTGGAGGCCTTCGTAA

Peptide Sequence

PEP ID	Os08t0100500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:36145:45629:1 gene:Os08g0100500 transcript:Os08t0100500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulation of nuclear pre-mRNA protein domain containing protein. (Os08t0100500-01);Conserved hypothetical protein. (Os08t0100500-02);Hypothetical conserved gene. (Os08t0100500-03)
Sequence	MAPAGRRGAKAHKWTTQPQLGDLVLAKVKGYPPWPAKVSKPEDWDQMPVPRKVFVVFFGT REIAHIALPDLQPFTENAKSEVMDRSRNKQCPKKYIDSFAEAVVEICKAYDDLPKSSETT TCMLPDDQSEQPTEHLVKSPNNDEAPRSGQMEGDSPSDNLNTSGLGSGTEVDIKDGSCDI RDSSLAAVKRKKPKDLDQPKKKKPVTSKSAINMHLEQDCSATTVHAERELEEPKAEKEIN PSEFLTLDPTVQIVCALEVPKKSKAAKQSKNAERKDNKRVNVADISGRTTPGAVLDTELK RSAEKDSKGFKKSKLMMKQSVSNESEKIDHKRIMVDKSDKLLARKSSSVFSSNKKPLPGS EQRKLDNSTDMRPAKRPKLMDRANETVKTEAKSETSLHADNEKDSALKIEKSIPAEAVSN SVPKIGVGDDWTRRSGSLLSPLARLHSQGSEPASGSTQLSAVDTAKKVSSLKENFSRVGK PLAKPRRRACRFGDDDEEEQRTPPHKSSVKSIPMRGVPTEKFQSQTGVRGISSSQIGNAS AMKFGVAREEKPKSIGRSPVEHEPDYTSPNQDKMHGRLQIMGKRSTTSSVDTSASLGNKT NLADRRSSGQLRMAASSEVKKTQGSSSKLLHQTPGNLHSQNPDDSEKNALLSKSENSKAK TKSGTQITATVEGRISTAMQAERIGKMDHSKEQRSDFVDKAAFAEPNSDPVKSMKHLIAA AQARRNLIAAAQGKSDGLSADNTVLSSTPYGLPGLSPGPVFHIPSASRIIPESDGMQFPD SFCAITEPGQQVAMKNLLEIEHEHGKSPKTRQSSDSLSGGTDAAIARDALEGMIETLSRT KDSIGRATRHAIECSKYGIAAEIVELLVLKLENEPNLHRRVDLLFLIDSITQCSHSQKGV AGVSYVPTVQAALPRLLGAAAPPGPGARENRRQCLKVLRLWLERKIMPEGILRRYMDDIE VPNDDANTGFLLRRPSRAERSVDDPIREMEGMLVDEYGSNANFELSGILSSNVFENDDDF PGLSPAISLPVQSGRMQENEQAIAPNFVEENIRLPKDVTSDVPMEDASLLPRDKQQTDGA IPVVHDLQHEIDREQALADQNELPPLPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPP LPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPSS LGYQPPAPEYFRASNSNQLNQMAGNASIQGIGNMTNFIPGGSVNTQAAVNFTPSVPPDYG NNNLYIKPQGSNGNFQFRPTGVPFQQGTFSAFPSAQTPPVRPHTHLTQMNPVGQQAVPPC NPYAVQSFPNNQSQYTSDEQWRMTSGNFSPDDQRNTWLPGARALSCAEGSFMQDGYPRSN IDRSSMNPMTHQRPVLNRMPSGAPVPGHVPQMLPARPDIHTFNCWRPS

Transcript Sequence

Transcript ID	Os08t0100500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:36145:45629:1 gene:Os08g0100500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulation of nuclear pre-mRNA protein domain containing protein. (Os08t0100500-01);Conserved hypothetical protein. (Os08t0100500-02);Hypothetical conserved gene. (Os08t0100500-03)
Sequence	GTGAGGAGAAGTAGAGAGTAGTAGACAAGGGAAAGGATTGCAGATTTGCAGATGCAGCAG CAGCAAGAGATGGAGATGGAGATGGAGATGGATTGAGGAGGAAGAAAAGCCGCAATCCAA TCTGCCCTCCGCCTCCGCCTCCGCCGCCGGATTCCCTAGGGTTCCACCCTCGCGCGCCTT CTCCTTCCTTTGCTCCGCGCGTGCGGCGCTAGGGTTTCCTTCCTTCCTTCTCTTTTAGGG TTTGGTTTCCTTGCCCTCTCCCGCCCTGGGGGAGACCTAGCCTGGGAATGGCTCCCGCCG GTAGGCGGGGCGCCAAGGCCCACAAGTGGACCACACAGCCGCAGCTCGGCGACCTCGTCC TCGCCAAGGTCAAGGGCTACCCCCCATGGCCGGCCAAGGTCAGCAAGCCGGAGGACTGGG ACCAGATGCCGGTTCCGCGCAAGGTCTTTGTTGTCTTCTTCGGTACCAGAGAGATCGCTC ACATCGCTTTGCCAGATCTTCAGCCGTTTACTGAGAATGCAAAGAGTGAGGTGATGGATC GATCTCGGAACAAGCAGTGCCCCAAAAAGTATATCGACAGTTTTGCTGAAGCTGTCGTGG AGATCTGCAAGGCCTATGATGATCTGCCAAAATCATCTGAAACTACGACCTGTATGTTGC CTGATGATCAAAGTGAACAACCTACAGAGCACCTTGTAAAGTCACCCAATAATGATGAGG CTCCAAGATCGGGGCAAATGGAAGGTGATAGTCCTAGTGACAACTTAAATACATCAGGGT TAGGTTCAGGGACTGAGGTGGACATAAAAGATGGTTCTTGTGACATAAGGGATTCCTCTC TGGCAGCTGTTAAAAGGAAAAAGCCTAAGGATCTTGATCAACCCAAGAAAAAGAAACCGG TGACTTCTAAGTCAGCCATCAATATGCACCTTGAACAAGACTGTTCAGCAACCACTGTCC ATGCAGAAAGAGAGCTTGAAGAACCAAAAGCTGAAAAGGAGATCAATCCATCAGAATTCT TGACCTTGGACCCCACTGTACAAATAGTGTGCGCCCTTGAAGTACCCAAGAAATCTAAAG CCGCGAAACAGTCAAAGAATGCTGAAAGAAAGGACAACAAACGTGTTAATGTTGCTGATA TTTCAGGGAGGACTACACCAGGAGCTGTACTTGACACCGAACTTAAAAGGAGTGCCGAGA AGGATAGCAAGGGTTTTAAAAAGTCTAAATTGATGATGAAACAATCAGTTTCCAATGAAT CAGAGAAAATAGACCATAAACGAATAATGGTAGACAAATCTGACAAGCTGTTGGCTAGGA AATCATCTTCAGTCTTCTCTTCCAATAAGAAACCTCTCCCTGGTAGCGAGCAGCGCAAGC TGGACAATAGCACTGATATGCGTCCAGCAAAGAGGCCAAAATTGATGGACAGGGCCAATG AAACAGTTAAGACAGAAGCAAAGAGCGAGACCAGCTTACATGCTGATAATGAAAAAGATA GTGCCTTGAAAATTGAAAAATCTATTCCTGCAGAAGCTGTAAGTAACTCGGTTCCTAAGA TTGGAGTGGGTGATGATTGGACCCGAAGATCAGGTAGTCTTTTATCACCCCTAGCAAGGC TGCACTCTCAGGGATCAGAACCAGCATCTGGTTCAACTCAGTTAAGCGCTGTTGATACTG CTAAAAAAGTCTCCAGCTTGAAGGAGAATTTCTCGCGTGTTGGTAAGCCATTGGCAAAGC CCAGGAGAAGAGCATGCCGCTTTGGTGATGATGACGAGGAAGAACAACGGACACCTCCTC ATAAATCTTCTGTTAAATCCATCCCCATGCGTGGAGTCCCCACAGAGAAGTTCCAATCAC AGACAGGGGTTCGTGGGATTTCTTCATCCCAAATTGGCAATGCTTCTGCAATGAAATTTG GTGTGGCAAGAGAAGAGAAACCTAAAAGCATTGGGAGGTCACCTGTGGAGCATGAGCCAG ATTATACTTCACCAAATCAAGACAAAATGCATGGTAGACTACAGATAATGGGGAAAAGGT CAACCACAAGCTCGGTTGACACTTCTGCTAGTCTGGGTAACAAAACTAACCTGGCAGATC GCAGATCCTCTGGGCAATTAAGAATGGCAGCATCCTCTGAAGTGAAGAAAACACAAGGAA GTTCTTCTAAACTATTGCACCAGACACCGGGGAACTTGCACTCTCAAAACCCTGATGACT CGGAAAAGAATGCACTGTTGTCTAAATCGGAAAACAGTAAGGCTAAGACTAAATCTGGCA CACAGATAACTGCAACTGTTGAGGGTCGGATAAGTACCGCTATGCAAGCTGAACGGATTG GGAAGATGGACCACTCCAAAGAGCAAAGATCAGATTTTGTTGATAAAGCAGCTTTTGCTG AACCTAATTCTGATCCTGTCAAGTCAATGAAGCATCTCATTGCAGCTGCTCAAGCAAGAA GGAATCTTATTGCGGCTGCTCAAGGAAAGTCTGATGGGTTATCTGCTGATAATACTGTTC TTTCCTCCACACCATATGGCTTGCCTGGACTAAGCCCTGGTCCTGTTTTTCACATTCCAT CTGCATCTAGAATTATTCCAGAGAGTGATGGCATGCAGTTTCCGGACTCCTTTTGTGCTA TTACTGAACCTGGTCAACAAGTTGCTATGAAAAATCTACTGGAAATTGAGCATGAACATG GAAAGAGCCCCAAAACTAGGCAATCGAGCGATTCATTGAGTGGTGGAACAGATGCAGCGA TTGCACGTGATGCTCTGGAGGGTATGATAGAGACGCTTTCAAGGACAAAGGATAGTATAG GGCGTGCTACACGTCATGCAATAGAGTGCTCAAAATATGGCATCGCTGCAGAGATTGTGG AGCTTCTTGTGCTGAAATTAGAGAATGAGCCTAATTTGCATCGAAGAGTTGACCTCCTTT TTCTTATAGACTCCATAACTCAGTGTTCTCACTCTCAGAAAGGTGTTGCTGGCGTTTCAT ATGTTCCCACCGTTCAAGCTGCGCTACCTCGTCTCTTGGGCGCTGCTGCTCCACCAGGAC CCGGTGCTCGTGAAAATCGACGACAGTGCCTCAAAGTTTTACGGTTATGGCTTGAGAGAA AGATTATGCCAGAAGGCATACTTCGAAGATACATGGATGATATTGAGGTGCCAAATGATG ATGCTAACACAGGTTTTCTGCTGAGGCGACCATCTCGAGCTGAACGCTCTGTAGATGATC CTATTAGGGAGATGGAAGGCATGCTTGTTGATGAGTATGGAAGCAATGCAAACTTTGAGC TCTCTGGGATTCTATCATCCAATGTCTTTGAAAATGATGACGATTTCCCTGGATTATCAC CAGCTATTTCACTGCCAGTTCAAAGTGGCAGGATGCAAGAAAATGAACAAGCTATTGCAC CAAATTTTGTTGAGGAAAACATTAGGTTACCAAAAGATGTGACTAGTGATGTTCCAATGG AAGATGCCTCTCTTTTACCAAGAGATAAGCAACAGACAGATGGAGCTATCCCTGTTGTGC ATGACTTACAGCATGAAATTGATCGAGAGCAGGCATTGGCTGATCAGAATGAACTTCCTC CTCTACCTGACGGTCCTCCACCGCTTCCATTAGATGCACCACCTCCCCCACCTCTGCCTG AGGGACCCCCACCGCTTCCATCAGATTCACCACCTTGCCAGCCTCCTTTGCCTCCTTCAC CACCACCTGCTACACCGCCACCGCCACCACCACTTTCACCATCTTTGCCACCTCCGCCAC CACCCCCACCTCTACCATCTGGCCCACCTCCTCAGCCTGCCCCACCACCCCTGCCAATCC AGCCCCCACCTATTCCTCCCCCACCTGTTCCATCATCTCCGTCATCATTGGGCTATCAGC CTCCTGCACCCGAATATTTCAGGGCTTCAAATAGCAACCAACTTAACCAGATGGCAGGGA ATGCATCAATTCAAGGAATTGGAAATATGACAAACTTCATTCCTGGTGGATCAGTGAACA CTCAAGCTGCAGTTAATTTTACCCCATCAGTGCCACCAGATTATGGGAATAACAATCTAT ATATAAAACCACAAGGTTCTAATGGTAATTTTCAGTTTCGACCAACTGGTGTACCTTTTC AGCAAGGGACATTCAGTGCTTTTCCATCTGCACAAACACCACCAGTTCGTCCCCACACTC ATCTTACACAAATGAACCCAGTGGGCCAACAAGCTGTACCTCCGTGCAATCCTTATGCTG TACAGTCCTTTCCAAATAATCAAAGTCAATATACATCTGACGAGCAATGGCGAATGACAT CTGGTAACTTCAGCCCAGATGATCAGCGCAATACTTGGTTACCAGGCGCCAGAGCATTAT CTTGTGCAGAGGGGTCATTCATGCAGGATGGATATCCAAGGTCTAACATTGACAGATCTT CAATGAACCCTATGACTCATCAACGTCCTGTACTCAACCGTATGCCATCTGGAGCACCTG TACCAGGACATGTTCCTCAGATGCTGCCGGCCAGACCTGATATTCACACATTTAATTGCT GGAGGCCTTCGTAATGAAATTTCACAAATTGAACTCCTTGCTCGTGGGTTTTCACATGGG AAATTGGGATTGCCAGAAGCCGTTTCAATTCAACTTGCAACAAGAGGTCTAAACAATTTC TGTTACTGAAAGGCAAGGGGTTTCTTCTGGCTTGTTTGGTATGGCCGTTGGTTACTCTGA TGAAGTTGAGGGGAGCTTCTGTGGCAAGTTCAATGCCAATGCTGGATTGAAGAGGCAAAA TGTAGATTTGTACAAAGAAAGAGGGTACTCCATGTACAGTTGATAACATTATTATGCGTT GTAGTCCCTTGGCACAAGCTAGGGATGATGGATATGATTTTTTTTAACCTTTTTTGGTTG GATAACTGCAAAAAAAAAATGCTAACCGATTGGGAGAGGCAATGATGGAATTTTTGGGT