Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0694400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:29566093:29571527:-1 gene:Os07g0694400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRREGULAR XYLEM 9, glycosyltransferase family GT43 member C description:Glycosyl transferase, family 43 protein. (Os07t0694400-01)
Sequence	ATGGCGTCGGCAGGTGGCTGCAAGAAGAAGACGGGAAATAGTCGTAGTAGGAGCCCTCGT AGCCCGGTGGTGCTGCGGAGGGCGATGCTGCATTCGTCCCTCTGCTTCCTGGTCGGCCTC CTTGCCGGCCTCGCCGCCCCCTCCGACTGGCCCGCTGCCGCCGGCGCCGCCGTCTTCCTC CGCACGCTCCGTGCCAGCAATGTCATCTTCAGTCGCAGTAGCAATAGGCCGCAGCAGCCG CAGCTGGTGGTAGTGGTCACCACCACCGAGCAGTCCGACGACTCCGAGCGGCGCGCCGCC GGGCTGACGCGCACGGCGCACGCGCTGCGGCTGGTGTCGCCGCCGCTTCTCTGGCTGGTG GTGGAGGAGGCCCCCGCGGAGAAGCACGCGGCGCCGCCCACGGCGCGGCTGCTGCGGCGC ACGGGGGTGGTGCACCGCCACCTCCTCATGAAACAAGGAGATGATGATTTTAGCATGCAG ATATCGATGAGGAGGGAGCAGCAGAGGAACGTGGCTCTGCGCCACATCGAGGACCACCGC ATCGCCGGCGTCGTGCTCTTCGGGGGCCTCGCCGACATCTACGACCTCCGCCTCCTCCAC CACCTCAGGGACATCAGGACATTTGGTGCGTGGCCCGTGGCGACAGTGTCGGCGTACGAG CGAAAGGTGATGGTGCAAGGCCCACTCTGCATCAACACATCCTCCTCGTCGGTGATCACC CGCGGCTGGTTCGATATGGACATGGACATGGCGGCCGGCGGCGAGCGGCGAGCGGCCGCT GACCGGCCGCCTCCGGAGACGTTAATGGAAGTGGGCGGGTTCGCGTTCAGCAGCTGGATG CTGTGGGACCCGCACAGGTGGGACCGCTTCCCCCTCTCCGACCCCGACGCCTCGCAGGAA TCAGTGAAGTTCGTGCAGCGGGTGGCGGTGGAGGAATACAACCAGTCGACGACGAGGGGG ATGCCGGACTCCGATTGCTCCCAAATCATGCTCTGGCGCATCCAAACTACGCTCTAG

Peptide Sequence

PEP ID	Os07t0694400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:29566093:29571527:-1 gene:Os07g0694400 transcript:Os07t0694400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRREGULAR XYLEM 9, glycosyltransferase family GT43 member C description:Glycosyl transferase, family 43 protein. (Os07t0694400-01)
Sequence	MASAGGCKKKTGNSRSRSPRSPVVLRRAMLHSSLCFLVGLLAGLAAPSDWPAAAGAAVFL RTLRASNVIFSRSSNRPQQPQLVVVVTTTEQSDDSERRAAGLTRTAHALRLVSPPLLWLV VEEAPAEKHAAPPTARLLRRTGVVHRHLLMKQGDDDFSMQISMRREQQRNVALRHIEDHR IAGVVLFGGLADIYDLRLLHHLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVIT RGWFDMDMDMAAGGERRAAADRPPPETLMEVGGFAFSSWMLWDPHRWDRFPLSDPDASQE SVKFVQRVAVEEYNQSTTRGMPDSDCSQIMLWRIQTTL

Transcript Sequence

Transcript ID	Os07t0694400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:29566093:29571527:-1 gene:Os07g0694400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRREGULAR XYLEM 9, glycosyltransferase family GT43 member C description:Glycosyl transferase, family 43 protein. (Os07t0694400-01)
Sequence	CAGATCAGATCGATCCGGGCAGGCGGGCAGCATGGCGTCGGCAGGTGGCTGCAAGAAGAA GACGGGAAATAGTCGTAGTAGGAGCCCTCGTAGCCCGGTGGTGCTGCGGAGGGCGATGCT GCATTCGTCCCTCTGCTTCCTGGTCGGCCTCCTTGCCGGCCTCGCCGCCCCCTCCGACTG GCCCGCTGCCGCCGGCGCCGCCGTCTTCCTCCGCACGCTCCGTGCCAGCAATGTCATCTT CAGTCGCAGTAGCAATAGGCCGCAGCAGCCGCAGCTGGTGGTAGTGGTCACCACCACCGA GCAGTCCGACGACTCCGAGCGGCGCGCCGCCGGGCTGACGCGCACGGCGCACGCGCTGCG GCTGGTGTCGCCGCCGCTTCTCTGGCTGGTGGTGGAGGAGGCCCCCGCGGAGAAGCACGC GGCGCCGCCCACGGCGCGGCTGCTGCGGCGCACGGGGGTGGTGCACCGCCACCTCCTCAT GAAACAAGGAGATGATGATTTTAGCATGCAGATATCGATGAGGAGGGAGCAGCAGAGGAA CGTGGCTCTGCGCCACATCGAGGACCACCGCATCGCCGGCGTCGTGCTCTTCGGGGGCCT CGCCGACATCTACGACCTCCGCCTCCTCCACCACCTCAGGGACATCAGGACATTTGGTGC GTGGCCCGTGGCGACAGTGTCGGCGTACGAGCGAAAGGTGATGGTGCAAGGCCCACTCTG CATCAACACATCCTCCTCGTCGGTGATCACCCGCGGCTGGTTCGATATGGACATGGACAT GGCGGCCGGCGGCGAGCGGCGAGCGGCCGCTGACCGGCCGCCTCCGGAGACGTTAATGGA AGTGGGCGGGTTCGCGTTCAGCAGCTGGATGCTGTGGGACCCGCACAGGTGGGACCGCTT CCCCCTCTCCGACCCCGACGCCTCGCAGGAATCAGTGAAGTTCGTGCAGCGGGTGGCGGT GGAGGAATACAACCAGTCGACGACGAGGGGGATGCCGGACTCCGATTGCTCCCAAATCAT GCTCTGGCGCATCCAAACTACGCTCTAGGCTCTAGCTAGCTTAATTTCATTCTTCTTCCT TAATCATCGATCGTCAATCTCCAAAACCCACACTCCTACTCCTATCTAAGACAAATACCT GCATATAAATATATACACACGTATACGTGGTGTGTTCACGTACGGTTAATT