Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0693800-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:29531289:29534094:1 gene:Os07g0693800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OMEGA-3 FATTY ACID DESATURASE 8 description:Omega-3 fatty acid desaturase, Acclimation to low-temperature stress, Defense response (Os07t0693800-01);Similar to Plastid omega-3 fatty acid desaturase (Fragment). (Os07t0693800-02)
Sequence	ATGGCCCGGCTGCTACTCTCCGGCGTCGCGCCGCTCCCCCTCCTCCCCTGCCGCCGTCGC GCCATTGCATTTGCGCTCCCACTTGGGAATGTCCGCCTCCGCCTCCGTGTGGCCGCACCC ACCAGCCGCGTGGCCACCGTGGAGGAGGACGACAATGAAAATAATGCTCCTCCTCCTCCT TGTGAGGACTTCGACCCGGGCGCGGCGCCCCCGTTTGGTCTGGCCGACATCCGCGCCGCT ATCCCCAAGCACTGTTGGGTGAAGGACCCCTGGCGATCCATGGGGTACGTGCTGCGCGAC GTGGTGGTGGTGTTCGCCCTCGCTGCCGCCGCCGCGCGCCTCCACAGCTGCCTCGCCTGG CCGCTCTACTGGGCGGCGCAGGGAACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGAC TGCGGGCACGGGAGCTTCTCCAACAACTCGAGGCTCAACAGCGTGATGGGCCACATACTC CACTCCTCCATCCTCGTACCCTACCATGGCTGGAGGATTAGCCACAGGACGCATCATCAG AACCATGGCCATGTCGACAAGGATGAGTCCTGGCATCCCCTCCCCGAGCGGCTGTACAGG AGCCTTAACAGAGCCACCCGGATGCTCCGCTTCTCCATACCCTTCCCCATGCTCGCCTAC CCATTCTACCTGTGGTCTCGGAGCCCAGGAAAGTCTGGTTCGCATTTCCATCCCAGCAGC GACCTGTTCCAGCCCAACGAAAGGAACGATGTGCTGACATCCACAGCGTGCTGGGTGGCC ATGGCTGCCCTCCTCGCAGGCCTCACCTTCCTCATGGGACCCCTCCTCATGCTCAACCTC TACTTTGTCCCTTACTGGATTTTTGTTATGTGGCTGGACTTCGTCACCTACTTGCACCAT CACGGCCACAACGACAAGCTGCCCTGGTACCGTGGCAAGATTGATGATATGTACAGGAAT GGAGCTATTTGCGGGGAGGACTGA

Peptide Sequence

PEP ID	Os07t0693800-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:29531289:29534094:1 gene:Os07g0693800 transcript:Os07t0693800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OMEGA-3 FATTY ACID DESATURASE 8 description:Omega-3 fatty acid desaturase, Acclimation to low-temperature stress, Defense response (Os07t0693800-01);Similar to Plastid omega-3 fatty acid desaturase (Fragment). (Os07t0693800-02)
Sequence	MARLLLSGVAPLPLLPCRRRAIAFALPLGNVRLRLRVAAPTSRVATVEEDDNENNAPPPP CEDFDPGAAPPFGLADIRAAIPKHCWVKDPWRSMGYVLRDVVVVFALAAAAARLHSCLAW PLYWAAQGTMFWALFVLGHDCGHGSFSNNSRLNSVMGHILHSSILVPYHGWRISHRTHHQ NHGHVDKDESWHPLPERLYRSLNRATRMLRFSIPFPMLAYPFYLWSRSPGKSGSHFHPSS DLFQPNERNDVLTSTACWVAMAALLAGLTFLMGPLLMLNLYFVPYWIFVMWLDFVTYLHH HGHNDKLPWYRGKIDDMYRNGAICGED

Transcript Sequence

Transcript ID	Os07t0693800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:29531289:29534094:1 gene:Os07g0693800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OMEGA-3 FATTY ACID DESATURASE 8 description:Omega-3 fatty acid desaturase, Acclimation to low-temperature stress, Defense response (Os07t0693800-01);Similar to Plastid omega-3 fatty acid desaturase (Fragment). (Os07t0693800-02)
Sequence	ACCAATACCAATTGGAGTAGAACCAACCAAGGAAAGAATGGCCCGGCTGCTACTCTCCGG CGTCGCGCCGCTCCCCCTCCTCCCCTGCCGCCGTCGCGCCATTGCATTTGCGCTCCCACT TGGGAATGTCCGCCTCCGCCTCCGTGTGGCCGCACCCACCAGCCGCGTGGCCACCGTGGA GGAGGACGACAATGAAAATAATGCTCCTCCTCCTCCTTGTGAGGACTTCGACCCGGGCGC GGCGCCCCCGTTTGGTCTGGCCGACATCCGCGCCGCTATCCCCAAGCACTGTTGGGTGAA GGACCCCTGGCGATCCATGGGGTACGTGCTGCGCGACGTGGTGGTGGTGTTCGCCCTCGC TGCCGCCGCCGCGCGCCTCCACAGCTGCCTCGCCTGGCCGCTCTACTGGGCGGCGCAGGG AACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGACTGCGGGCACGGGAGCTTCTCCAA CAACTCGAGGCTCAACAGCGTGATGGGCCACATACTCCACTCCTCCATCCTCGTACCCTA CCATGGCTGGAGGATTAGCCACAGGACGCATCATCAGAACCATGGCCATGTCGACAAGGA TGAGTCCTGGCATCCCCTCCCCGAGCGGCTGTACAGGAGCCTTAACAGAGCCACCCGGAT GCTCCGCTTCTCCATACCCTTCCCCATGCTCGCCTACCCATTCTACCTGTGGTCTCGGAG CCCAGGAAAGTCTGGTTCGCATTTCCATCCCAGCAGCGACCTGTTCCAGCCCAACGAAAG GAACGATGTGCTGACATCCACAGCGTGCTGGGTGGCCATGGCTGCCCTCCTCGCAGGCCT CACCTTCCTCATGGGACCCCTCCTCATGCTCAACCTCTACTTTGTCCCTTACTGGATTTT TGTTATGTGGCTGGACTTCGTCACCTACTTGCACCATCACGGCCACAACGACAAGCTGCC CTGGTACCGTGGCAAGATTGATGATATGTACAGGAATGGAGCTATTTGCGGGGAGGACTG ACGACAGTGGACAGGGACTATGGGTGGATCAACAACATCCACCACGACATCGGGACACAT GTCATTCACCATCTTTTCCCCCAAATCCCGCATTACCATCTAATTGAGGCGACGGAAGCA GCAAAGGGTGTGATGGGGAAATACTACAGGGAGCCGGACAAGTCTGGGCCTTTTCCCTTA CACCTGTTTGGAGCGCTGTCCCGGAGCTTGAAACGCGACCACTATGTCAGCGACACCGGA GATGTGGTCTACTACCAGACCGACCCTGCTAACTAAATTAATTTTACATTTCCTTCAATT CTTTTAAGCCCGGAGGCTTAAATTAGCTTAATTAGATAGCTGCGACTGACCTGGACATGT ATTCAACATTCGATCCACAGACAGATAGAAAGAGACCTATATATATCGCCGATCAATCGA TATATATGTGCGTGTCCGTGTGGAGATATGGAGGTCACAATTCTTTCCATGGATATATAG GAGTATACATACATGTATTGAAGGATATGTAGCTAGATTTGATGTGCGTGCGTGCTGTAC TTTGTAAGACGCAGCATAAAGCTAGTGACAATTTGGACAAGGCC