Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0691100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:29388044:29390321:1 gene:Os07g0691100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 23 description:Similar to Pectin methylesterase 6 (Fragment). (Os07t0691100-01)
Sequence	ATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCC GTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACG TCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAG GAGCTGGGGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATG TTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAG CTCAAGAACGACAAGCGCACGTCGGGCGCCCTGCAGAACTGCAAGGAGCTGCTGGAGTAT GCCGTGGACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTC CACAAGGCCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACC TGCCTCGACGGCTTCCTCAACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTC AACAGCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACG CTCGGCAGCCTCAACATCGGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGG ATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTG GAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGC GAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCC GGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGC GACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACC AAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTG GAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATG GCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAG CGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCG CAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAAC ATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAAC TGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTG GCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTG GTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTAC GCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGC GTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAG GGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACG CAGCAGGGCAGGATGCACTAA

Peptide Sequence

PEP ID	Os07t0691100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:29388044:29390321:1 gene:Os07g0691100 transcript:Os07t0691100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 23 description:Similar to Pectin methylesterase 6 (Fragment). (Os07t0691100-01)
Sequence	MSKGAIIGASTVLVVAVVAAVCVVSFKNGGGGKEDGELSTSVKSVKAFCQPTDYQQTCEE ELGKAAGNGASSPTDLAKAMFAVTSEKISKAISESSTLEELKNDKRTSGALQNCKELLEY AVDDLKTSFEKLGGFEMTNFHKAVDDLRTWLSAALTYQGTCLDGFLNTTTDAADKMKSAL NSSQELTEDILAVVDQFSATLGSLNIGRRRLLADDGMPVWMSEGGRRQLLEAAGPEAGPV EFKPDVTVAADGSGDVKTIGEAVAKVPPKNKERYTIYVKAGTYNEYVSVGRPATNVNMIG DGIGKTIITGNKNFKMNLTTKDTATMEAIGNGFFMRGITVENTAGPENHQAVALRAQSDM AVFYQCEFDGYQDTLYPHAQRQFFRDCTVSGTIDFIFGNSQVVLQNCLLQPRKPMDNQVN IITAQGRREKRSAGGTVIHNCTVAPHPDLEKFTDKVKTYLARPWKEYSRTIFVQNEIGAV VDPVGWLEWNGNFALDTLYYAEVDNHGPGADMSKRAKWKGVQSLTYQDVQKEFTVEAFIQ GQEFIPKFGVPYIPGLLPQTQQGRMH

Transcript Sequence

Transcript ID	Os07t0691100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:29388044:29390321:1 gene:Os07g0691100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 23 description:Similar to Pectin methylesterase 6 (Fragment). (Os07t0691100-01)
Sequence	GCTTGCATTGCCTCCATCCTAGCTAGGTAGCTATATCGTCGTCATTAATTGGAGCTAGCT AGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAG GTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGG TGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGT CGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGA AGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGA CGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACG ACAAGCGCACGTCGGGCGCCCTGCAGAACTGCAAGGAGCTGCTGGAGTATGCCGTGGACG ACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGGCCG TGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCGACG GCTTCCTCAACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACAGCTCGC AGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCGGCAGCC TCAACATCGGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGGATGTCGGAGG GCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTGGAGTTCAAGC CGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGCGAGGCGGTGG CGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCCGGGACGTACA ATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGCGACGGCATCG GGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACCAAGGACACGG CGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTGGAGAACACGG CGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATGGCGGTGTTCT ACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAGCGCCAGTTCT TCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCGCAGGTTGTTC TTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAACATCATAACGG CGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAACTGCACGGTGG CGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTGGCGCGGCCGT GGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTGGTGGATCCGG TGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTACGCGGAGGTTG ACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGCGTCCAGTCCC TCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAGGGCCAGGAGT TCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACGCAGCAGGGCA GGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGCCCCCAGCCCGGA CCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTGCATCAATTGCCG GCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATATATGCATCTCAC ACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCGATCATGGAACAT GCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATATAATGTATATTC AATCTCTTTGTTACTTTC