Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0688000-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:29225304:29228501:1 gene:Os07g0688000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 3.2 description:Metallophosphoesterase domain containing protein. (Os07t0688000-01);Metallophosphoesterase domain containing protein. (Os07t0688000-02)
Sequence

ATGATGGCTGTGACAAATGGAGTAATCCATGCATCTTCTAGGGAACCCTTATTTTCCTTC
GGTGTCATTGCTGATGTCCAGTACGCTGATATTCCAGATGGTCGCTCATTCCTTGGTGTC
CCACGCTACTACCGTCATAGCATCAGCGTCCTCCAAAGGGCTGTCAGCACATGGAACAAA
CAACACAACATCAAGTTTTCAATCAACTTTGGTGACATCATTGATGGATATTGCCCAAAG
GACAAATCGTTGTGGGCAGTGCAGAAGGTCCTTGATGAGTTTGAGAAATTTGATGGCCCA
ACTTACCACATGTTTGGGAACCATTGCCTCTATAACCTTCCTCGTGGCAAGCTAGTATCG
TTGCTGAAGATGCCAACCGATTCTGATCGTGCATACTATGACTTCTCTCCATGTCCCGAG
TACAGATTTGTTGTCCTGGACGCTTATGACTTCAGTGCACTTGGCTGGCCCCGTGACCAT
CCAGTGACTGCCGAAGCAATGAAGTTCCTGGAAGAAAAGAACCCAAACTCTGACAAGAAC
AGCCCTGACGGTCTGGTTGGCGTTGACCGGCGGTTTGTGATGTTTAATGGTGGAGTTGGT
AAAGAGCAGTTGTCATGGCTCAATGATGTCCTCCAGGATGCATCAGCACGCCGGCAAAAT
GTCATCCTATGCAGTCATCTCCCAATGGATCCTGGCTCAGCTTCTTTTGCAGCTCTCATG
TGGAACTACGATGAGGTGATGGCTATTGTTCGCCAGTACAAATGTGTTAAGGCATGCTTT
GCCGGGCACGACCACAAGGGAGGTCACTCTGTGGACTCGCATGGCGTACATCACCGGACT
CTTGAGGCTGCATTGGAGTGTCCTCCTGGTACTAGTGCATTCGGGCACATCGAAGTGTAT
CCAGACAAGTTGTTGCTTGTGGGTTCTGATAAAATGGCTGATACTGAGATGTGTTTTGAG
CCCTAG

Peptide Sequence

PEP ID

Os07t0688000-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:29225304:29228501:1 gene:Os07g0688000 transcript:Os07t0688000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 3.2 description:Metallophosphoesterase domain containing protein. (Os07t0688000-01);Metallophosphoesterase domain containing protein. (Os07t0688000-02)
Sequence

MMAVTNGVIHASSREPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSISVLQRAVSTWNK
QHNIKFSINFGDIIDGYCPKDKSLWAVQKVLDEFEKFDGPTYHMFGNHCLYNLPRGKLVS
LLKMPTDSDRAYYDFSPCPEYRFVVLDAYDFSALGWPRDHPVTAEAMKFLEEKNPNSDKN
SPDGLVGVDRRFVMFNGGVGKEQLSWLNDVLQDASARRQNVILCSHLPMDPGSASFAALM
WNYDEVMAIVRQYKCVKACFAGHDHKGGHSVDSHGVHHRTLEAALECPPGTSAFGHIEVY
PDKLLLVGSDKMADTEMCFEP

Transcript Sequence

Transcript ID

Os07t0688000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:29225304:29228501:1 gene:Os07g0688000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 3.2 description:Metallophosphoesterase domain containing protein. (Os07t0688000-01);Metallophosphoesterase domain containing protein. (Os07t0688000-02)
Sequence

ATCATCCCGTCTCCGTCCTCGCCCGCCGCCGCCGCCGCCGCCGATCTCCATCCTGCGAGG
TGGCGCCGGCTTCCGCCGCATCATCGCTCACCGTTGAGCATCCTAATCCATCCCATCCGC
CCTCCTCGCCCGCCGCTTCCGCCGATCCCCATCCTAGCCATCACCATCACGCACGCCACG
CCATCCGCCTCCATCCCTCGCCGCCGCCGTGCACCACCGCCGTCATCCGCCTCTTCCTCT
TCTTCTTGCTCCACAAGTTCTATCACAGAGATGATGGCTGTGACAAATGGAGTAATCCAT
GCATCTTCTAGGGAACCCTTATTTTCCTTCGGTGTCATTGCTGATGTCCAGTACGCTGAT
ATTCCAGATGGTCGCTCATTCCTTGGTGTCCCACGCTACTACCGTCATAGCATCAGCGTC
CTCCAAAGGGCTGTCAGCACATGGAACAAACAACACAACATCAAGTTTTCAATCAACTTT
GGTGACATCATTGATGGATATTGCCCAAAGGACAAATCGTTGTGGGCAGTGCAGAAGGTC
CTTGATGAGTTTGAGAAATTTGATGGCCCAACTTACCACATGTTTGGGAACCATTGCCTC
TATAACCTTCCTCGTGGCAAGCTAGTATCGTTGCTGAAGATGCCAACCGATTCTGATCGT
GCATACTATGACTTCTCTCCATGTCCCGAGTACAGATTTGTTGTCCTGGACGCTTATGAC
TTCAGTGCACTTGGCTGGCCCCGTGACCATCCAGTGACTGCCGAAGCAATGAAGTTCCTG
GAAGAAAAGAACCCAAACTCTGACAAGAACAGCCCTGACGGTCTGGTTGGCGTTGACCGG
CGGTTTGTGATGTTTAATGGTGGAGTTGGTAAAGAGCAGTTGTCATGGCTCAATGATGTC
CTCCAGGATGCATCAGCACGCCGGCAAAATGTCATCCTATGCAGTCATCTCCCAATGGAT
CCTGGCTCAGCTTCTTTTGCAGCTCTCATGTGGAACTACGATGAGGTGATGGCTATTGTT
CGCCAGTACAAATGTGTTAAGGCATGCTTTGCCGGGCACGACCACAAGGGAGGTCACTCT
GTGGACTCGCATGGCGTACATCACCGGACTCTTGAGGCTGCATTGGAGTGTCCTCCTGGT
ACTAGTGCATTCGGGCACATCGAAGTGTATCCAGACAAGTTGTTGCTTGTGGGTTCTGAT
AAAATGGCTGATACTGAGATGTGTTTTGAGCCCTAGAGTGAACTGTGTAGCGGAGGGAAA
TTCATCCAACTTCATTGTTTTGATTAATATTCAGAAACATGTGACTTCATTATACTCATT
TTCTGGCAGCATAATTACATGTATGTAATAGCATGGAAACTGGAGGTGGCAGCAGCTGCT
ATGCTTGCCGCTTAATCTCCCCTCCTCTCTCCCAAGAGGAAAGAGGCAGCAAGATGAAAA
GCAACCGAAAGCCAATTTGACGATCAAGTGAAAAGCTTATCATGTCTAATATGCATATTT
ACACATTGATGACTACATCGCCAACCAACTGAACTACTATCAAGTATCATCTGGCACTTA
AGATACAATATTGTTCACATCCTTCGATGCCATTTGATCAAGTGATCATTATCTACAAAA
GAATTAATTGATCATCTGTCCAATTCTGAATTACTGATTTTCTTCTCCAGGGGTGAGAAG
ACCTTCTGCAGTCACGAATGCTGCTACCAAGAGATGTTCCTTTTTGTAACTTGTCAATTC
AATTAGCCAGGATAATTTCCAAATGTCCGATCAACATGATCTGCCTCAAGCCCTCTTGCT
TTTCTTGTTCTTGTAGAGTGATTGTTGACCAATTAGGAGCTAGTGTTCAGAGTTGAGATT
AAAATCCTCATTGTGAGATGCACATCAATTCTGGTTGTCTGAAATGTTGCAGTTTTTATA
TGACTGTTATATCAATATAAGTAAAGCTGCCAGGATGTTC