Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0687000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:29191197:29194187:1 gene:Os07g0687000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 3 description:Serine/threonine protein kinase, Abiotic stresses (Os07t0687000-01)
Sequence	ATGTATAAGGCTAAAAGGACTGCTGCCCAGAAAGTAAGGCGCTGCCTTGGAAAATATGAG CTTGGACGCGCAATTGGTCAAGGAACTTTTGCAAAGGTTAGGTTTGCAAAGAACATGGAG ACCGGTGATCATGTTGCTATTAAGATCCTTGACAAAGCGAAGGTTCAGAAGCACAGATTA GTCGAACAGATTAGACGGGAAATTTGTACAATGAAGTTGATACAACACCCCAATGTTGTT CACCTGCATGAGGTGATGGGAAGTAAAACAAGGATTTTCATTGTTCTAGAATATGTGATG GGAGGAGAGCTCCATGATATTATTGCCACAAGTGGAAGGTTGAAGGAGGATGAAGCACGG AAATACTTTCAGCAACTGATCAACGCCGTAGATTACTGCCACAGTAGGGGTGTATACCAC AGAGACCTGAAGTTAGAGAATTTGTTGCTTGATACTGCCGGGAACATCAAAGTCTCGGAC TTTGGCCTAAGTGCTATATCTGAGCAAGTGAAGGCTGATGGATTACTACATACTACATGT GGAACACCTAATTATGTTGCTCCTGAGGTTATTGAAGATAAGGGCTACGATGGTGCTCTT GCAGACCTTTGGTCATGTGGAGTAATTCTTTTTGTGCTGCTTGCAGGATATCTTCCTTTT GAGGATGAAAATATTGTCTCCCTTTATAACAAGATTTCTGGAGCTCAGTTTACTTGTCCC TCTTGGTTTTCTGCTGAAGCTAAGAGGCTCATTGCTAGAATTCTGGATCCAAATCCTGCT ACTCGGATAACTACTTCTCAAGTGCTACAAGATCAATGGTTCAAAAAAGGCTATGAGTCC CCTGTTTTCGATGACAAATATTACCCTTATTTCCACGATGTTTATGATGCTTTTGGAGAC TCAGAAGAAAAACATGTGAAAGAGGCTATGGAAGAGCAGCCAACCTTGATGAATGCCTTT GAGTTGATTTCACTAAATAAGGGTCTGAATCTAGACAATTTTTTTGAGTCTGATAAGAAG TACAAGAGAGAGACAAGATTTACATCGCAGTGCCCTCCGAAAGAAATCATCAATAGGATC GAAGAAGCTGCTAACTTACTAGGATTTAATATTCAGAAGAGAAACTACAGGATGAGAATG GAGAATATAAAGGAAGGAAGAAAAGGACATCTAAACATTGCAACTGAGGTTTTCCAAGTG GCACCATCCTTACATGTGGTTGAGCTCAAAAAGGCCAAGGGAGATACCCTGGAGTTTCAA AAGTTCTACCAAACGCTCTCGACGCAACTAAAAGATGTTGTTTGGGAATTAGAAGATGCG GCTGAGGATATGAGCTAA

Peptide Sequence

PEP ID	Os07t0687000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:29191197:29194187:1 gene:Os07g0687000 transcript:Os07t0687000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 3 description:Serine/threonine protein kinase, Abiotic stresses (Os07t0687000-01)
Sequence	MYKAKRTAAQKVRRCLGKYELGRAIGQGTFAKVRFAKNMETGDHVAIKILDKAKVQKHRL VEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGELHDIIATSGRLKEDEAR KYFQQLINAVDYCHSRGVYHRDLKLENLLLDTAGNIKVSDFGLSAISEQVKADGLLHTTC GTPNYVAPEVIEDKGYDGALADLWSCGVILFVLLAGYLPFEDENIVSLYNKISGAQFTCP SWFSAEAKRLIARILDPNPATRITTSQVLQDQWFKKGYESPVFDDKYYPYFHDVYDAFGD SEEKHVKEAMEEQPTLMNAFELISLNKGLNLDNFFESDKKYKRETRFTSQCPPKEIINRI EEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQ KFYQTLSTQLKDVVWELEDAAEDMS

Transcript Sequence

Transcript ID	Os07t0687000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:29191197:29194187:1 gene:Os07g0687000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 3 description:Serine/threonine protein kinase, Abiotic stresses (Os07t0687000-01)
Sequence	TTTTGACTGAGGAAAGAATTTTTTTTTTCTGGAAGATGTATAAGGCTAAAAGGACTGCTG CCCAGAAAGTAAGGCGCTGCCTTGGAAAATATGAGCTTGGACGCGCAATTGGTCAAGGAA CTTTTGCAAAGGTTAGGTTTGCAAAGAACATGGAGACCGGTGATCATGTTGCTATTAAGA TCCTTGACAAAGCGAAGGTTCAGAAGCACAGATTAGTCGAACAGATTAGACGGGAAATTT GTACAATGAAGTTGATACAACACCCCAATGTTGTTCACCTGCATGAGGTGATGGGAAGTA AAACAAGGATTTTCATTGTTCTAGAATATGTGATGGGAGGAGAGCTCCATGATATTATTG CCACAAGTGGAAGGTTGAAGGAGGATGAAGCACGGAAATACTTTCAGCAACTGATCAACG CCGTAGATTACTGCCACAGTAGGGGTGTATACCACAGAGACCTGAAGTTAGAGAATTTGT TGCTTGATACTGCCGGGAACATCAAAGTCTCGGACTTTGGCCTAAGTGCTATATCTGAGC AAGTGAAGGCTGATGGATTACTACATACTACATGTGGAACACCTAATTATGTTGCTCCTG AGGTTATTGAAGATAAGGGCTACGATGGTGCTCTTGCAGACCTTTGGTCATGTGGAGTAA TTCTTTTTGTGCTGCTTGCAGGATATCTTCCTTTTGAGGATGAAAATATTGTCTCCCTTT ATAACAAGATTTCTGGAGCTCAGTTTACTTGTCCCTCTTGGTTTTCTGCTGAAGCTAAGA GGCTCATTGCTAGAATTCTGGATCCAAATCCTGCTACTCGGATAACTACTTCTCAAGTGC TACAAGATCAATGGTTCAAAAAAGGCTATGAGTCCCCTGTTTTCGATGACAAATATTACC CTTATTTCCACGATGTTTATGATGCTTTTGGAGACTCAGAAGAAAAACATGTGAAAGAGG CTATGGAAGAGCAGCCAACCTTGATGAATGCCTTTGAGTTGATTTCACTAAATAAGGGTC TGAATCTAGACAATTTTTTTGAGTCTGATAAGAAGTACAAGAGAGAGACAAGATTTACAT CGCAGTGCCCTCCGAAAGAAATCATCAATAGGATCGAAGAAGCTGCTAACTTACTAGGAT TTAATATTCAGAAGAGAAACTACAGGATGAGAATGGAGAATATAAAGGAAGGAAGAAAAG GACATCTAAACATTGCAACTGAGGTTTTCCAAGTGGCACCATCCTTACATGTGGTTGAGC TCAAAAAGGCCAAGGGAGATACCCTGGAGTTTCAAAAGTTCTACCAAACGCTCTCGACGC AACTAAAAGATGTTGTTTGGGAATTAGAAGATGCGGCTGAGGATATGAGCTAAGCGGAAT GA