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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0686300-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:29152545:29153434:-1 gene:Os07g0686300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0686300-01)
Sequence

ATGGAGATCTTGGTGAGTGCACTGCTCCTGCTCCTCGTGCCACCCTTGTCCGCCCTCCTC
GCCGTCGCCGCGCCGAGCCTCGCGTGGCCGTCGGGGTCGTCGTCGGTGAGGAAGCTGATC
GCCAAGAAGGTGGCGCCGGAGCAGGCGGCGCGCGACGAGCTGCTGCGCGTGGCGCGGTAC
AGTAGCGCTAGCGCCGCCGCTGCCGCTAGTGCTGTCCAACAACCAGGCGGCAGCGAGAGT
AGTCGTCCGGCGGCGGCGGCGGCGGATGATGGTGGGCGGCCGGATCAGTGCGCGGTGTGC
CTGAGCGGCATCGAGGAGGGCGACGAGGTGAGGGAGCTCCGGTGCCGGCACCTGTTCCAC
CGTGGCTGCCTCGACCGGTGGTGGTTGTCGGCGCGGCCGCCCGCCACGTGCCCGCTCTGC
CGCTGCCGGCTCCTGCAGAGCCCGTCGGCGGCGGCGGACGACGGCGACGGCGACGGCGAG
GAGGATTCGGACTCGGACATGGTGATGTTCATGGCGTACCTGCGAAGCAGTAGCACCTGG
CTCTAG

Peptide Sequence

PEP ID

Os07t0686300-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:29152545:29153434:-1 gene:Os07g0686300 transcript:Os07t0686300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0686300-01)
Sequence

MEILVSALLLLLVPPLSALLAVAAPSLAWPSGSSSVRKLIAKKVAPEQAARDELLRVARY
SSASAAAAASAVQQPGGSESSRPAAAAADDGGRPDQCAVCLSGIEEGDEVRELRCRHLFH
RGCLDRWWLSARPPATCPLCRCRLLQSPSAAADDGDGDGEEDSDSDMVMFMAYLRSSSTW
L

Transcript Sequence

Transcript ID

Os07t0686300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:29152545:29153434:-1 gene:Os07g0686300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0686300-01)
Sequence

TCGCGTCTCACTGCATTGTTGTGGATCGAGTAGCTATAGCTAGCTAGTGATGGAGATCTT
GGTGAGTGCACTGCTCCTGCTCCTCGTGCCACCCTTGTCCGCCCTCCTCGCCGTCGCCGC
GCCGAGCCTCGCGTGGCCGTCGGGGTCGTCGTCGGTGAGGAAGCTGATCGCCAAGAAGGT
GGCGCCGGAGCAGGCGGCGCGCGACGAGCTGCTGCGCGTGGCGCGGTACAGTAGCGCTAG
CGCCGCCGCTGCCGCTAGTGCTGTCCAACAACCAGGCGGCAGCGAGAGTAGTCGTCCGGC
GGCGGCGGCGGCGGATGATGGTGGGCGGCCGGATCAGTGCGCGGTGTGCCTGAGCGGCAT
CGAGGAGGGCGACGAGGTGAGGGAGCTCCGGTGCCGGCACCTGTTCCACCGTGGCTGCCT
CGACCGGTGGTGGTTGTCGGCGCGGCCGCCCGCCACGTGCCCGCTCTGCCGCTGCCGGCT
CCTGCAGAGCCCGTCGGCGGCGGCGGACGACGGCGACGGCGACGGCGAGGAGGATTCGGA
CTCGGACATGGTGATGTTCATGGCGTACCTGCGAAGCAGTAGCACCTGGCTCTAGCCATT
AAGGGCGTGTTTAGTTCCAAAAACTTTTCTCAAAAACATCGCATCAAATCTTTAGACACA
TATATAGGACATTAAATATAGATAAATAAAAAACTAATGGCATAGTTTGCATATAAATCG
CGAGACGAATCTTTTGAGTCTAATTAGGCCATGATTAACTATAAGTGCTACAATAACTTA
CATGTGCTAATGACAGATTGATTAGGCTTAAAAGATTCGTCTCGTGGTTTTAGTTTTTTT
ATTCGTGACCGAAAATCCCTTTTGACATCCGGTCAAACGTACAACGTGAC