Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0682000-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28919586:28920774:1 gene:Os07g0682000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os07t0682000-01)
Sequence

ATGGCAGACAAGCAAATGGCCAGTTTGATCATTAAGGCAAATCTCGAGTGTGAAAAGTGT
TGCAAGAAGATCCAGAAAGTCCTTAACAAACTCAAAGACAAGGAGAAGATCATTAACATC
GTTTATGAGAACTCGAACAATAGGGTGATCATATCGGGCCATTTCAAGCCAGAGGAGCTC
GCCCATAAGCTAAGATGCAAGGCCTGCGGGGTCATCAAAGACATTGAATTTGGGAAGCTT
GCAGAGGCAAAGAAGGAGGAGAAGAAGCCGGATCAGGCCAAGAAGGAGGAGAAGAAGCAG
CCTGAGGAAAAGAAACCTGAGGAGAAGAAGAAATCCGAGGAGGAGAAGAAGAAGGGCGAC
GAGAAGAAACCGGAGGAAGGCAAGAAGGAAGAGAAGAAGGAGGAGAAGCCAAAGGTGAAG
GAGGAGACCAAGGCCACGCCGGCGCCGTCGTCGACGACGGTGAACCTGCAGTTCACCAAC
ATGTGCGGCATCTGCTACCCGTGGCCGTGCAGCGACCCCACCCACTGGGGCGCCGGCGTC
GTCCACCCGCAGTGGCCGCAGTGCGAAGCCCCGGCGGCGGCGTTGCCAGCGTTCGTCCCT
GGCCACCACCACCACCAGCTCCCGCCATGGGGCGGCGTTCCGGCGCCGAAGTGGCCATGC
GGAGGCCCCTCGTACTGCGGTGGGTGCGGCACCTGCCGCGGCGGCGGGTGGCCGGCGGCG
GCGCCGATGCAGGCGATGTGCTGCCCTGGGCCGTCGTCGTGCAGAGGGTGCAAGGGTTGC
CGGCTCGTTCAGGAGGGCAAGTTCGTGTACGAGGAGTACCCGGCGGCGAGCGCATGTGCC
GTCATGTGA

Peptide Sequence

PEP ID

Os07t0682000-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28919586:28920774:1 gene:Os07g0682000 transcript:Os07t0682000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os07t0682000-01)
Sequence

MADKQMASLIIKANLECEKCCKKIQKVLNKLKDKEKIINIVYENSNNRVIISGHFKPEEL
AHKLRCKACGVIKDIEFGKLAEAKKEEKKPDQAKKEEKKQPEEKKPEEKKKSEEEKKKGD
EKKPEEGKKEEKKEEKPKVKEETKATPAPSSTTVNLQFTNMCGICYPWPCSDPTHWGAGV
VHPQWPQCEAPAAALPAFVPGHHHHQLPPWGGVPAPKWPCGGPSYCGGCGTCRGGGWPAA
APMQAMCCPGPSSCRGCKGCRLVQEGKFVYEEYPAASACAVM

Transcript Sequence

Transcript ID

Os07t0682000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28919586:28920774:1 gene:Os07g0682000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os07t0682000-01)
Sequence

ACTCGAACTTGCTGAACTTTGTTAGGATTATATTGTTGGATCCATCATGGCAGACAAGCA
AATGGCCAGTTTGATCATTAAGGCAAATCTCGAGTGTGAAAAGTGTTGCAAGAAGATCCA
GAAAGTCCTTAACAAACTCAAAGACAAGGAGAAGATCATTAACATCGTTTATGAGAACTC
GAACAATAGGGTGATCATATCGGGCCATTTCAAGCCAGAGGAGCTCGCCCATAAGCTAAG
ATGCAAGGCCTGCGGGGTCATCAAAGACATTGAATTTGGGAAGCTTGCAGAGGCAAAGAA
GGAGGAGAAGAAGCCGGATCAGGCCAAGAAGGAGGAGAAGAAGCAGCCTGAGGAAAAGAA
ACCTGAGGAGAAGAAGAAATCCGAGGAGGAGAAGAAGAAGGGCGACGAGAAGAAACCGGA
GGAAGGCAAGAAGGAAGAGAAGAAGGAGGAGAAGCCAAAGGTGAAGGAGGAGACCAAGGC
CACGCCGGCGCCGTCGTCGACGACGGTGAACCTGCAGTTCACCAACATGTGCGGCATCTG
CTACCCGTGGCCGTGCAGCGACCCCACCCACTGGGGCGCCGGCGTCGTCCACCCGCAGTG
GCCGCAGTGCGAAGCCCCGGCGGCGGCGTTGCCAGCGTTCGTCCCTGGCCACCACCACCA
CCAGCTCCCGCCATGGGGCGGCGTTCCGGCGCCGAAGTGGCCATGCGGAGGCCCCTCGTA
CTGCGGTGGGTGCGGCACCTGCCGCGGCGGCGGGTGGCCGGCGGCGGCGCCGATGCAGGC
GATGTGCTGCCCTGGGCCGTCGTCGTGCAGAGGGTGCAAGGGTTGCCGGCTCGTTCAGGA
GGGCAAGTTCGTGTACGAGGAGTACCCGGCGGCGAGCGCATGTGCCGTCATGTGATGTGA
TCATCTTCCCCTCGCCGCAATGTCATCGTTGACATTCTCTCG