Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0681600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:28901514:28908685:1 gene:Os07g0681600 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA helicase, ATP-dependent, RecQ type domain containing protein. (Os07t0681600-01)
Sequence	ATGGAGGCAGCTCTGAAGACGTATTTCGGCTTCTCGGGGTTCCGTTCGTACCAGCGGGAG ATCATACAGAAGGTCCTGGAAGGCCGGGATTGCTTGGTCGTCATGGCCACCGGCAGCGGC AAGTCGATCTGTTATCAAATCCCACCACTTGTTACAAAGAAGACAGCTGTTGTTGTCAGC CCTCTTCTGTCATTGATGCAAGACCAGGTCATGAGCTTAAAGCAGCATGGCGTGAAGTCT GAATACCTTGGCAGCACCCAAACAGACATCTCTGTTAGCGGTCAGGCTGAAAAAGGCGCA TTCGATGTTCTGTACATGACACCAGAGAAAGCTGTCTCACTTCCTTCAAGGTTTTGGAGT AACTTGCAGGCTGCCGGAATCTGCTTGTTGGCTGTCGATGAAGCACACTGCATATCAGAA TGGGGCCACGATTTCAGAACGGAGTACAAACAGTTGCATATGTTGCGTGACCTTCTAGTG GGTGTTCCCTTTGTCGCTTTAACTGCAACAGCCACACAAAGGGTACGTGGAGACATTGCC ACTTCCTTGACCCTGCGCATTCCTCACATTGTGGTAGGATCATTTGATCGTCCTAACCTT TTCTATGGCGTGAAATCATGCAACCGGTCTATGGCCTTTATCAATGAACTTGTGAAGGAT GTCTCAAAGAACTGTACTGTGGGTGGCTCAACAATAATATACTGTACTACCATCCGAGAG ACTGAACAGGTGCATGAGGCATTGGTTGCTGCTGGAATCAAGTCCAGCATTTACCATGGT AGAATGGGAAATAAAGCTAGAGAGGAATCACATAGATCGTTTGTTAGAGATGAAGTACTT GTGATGGTGGCTACCATTGCTTTTGGAATGGGAATCGACAAGCCAGATGTTAGATGTGTA ATACATTATGGATGTCCAAAGAGCCTGGAATCCTACTACCAGGAAAGTGGGCGTTGTGGA AGAGATGGACTGCCTTCAGTCTGCTGGCTATATTACCAAAGAAGTGATTTTATGAAATCT GATTTCTATTGTGCTGAAGCTAAAAGTCAAACTCATCGAAAAGCCATCATGGAGTCCTTC ATGGCAGCACAAAAATATTGCCTGCTTGCTACATGTCACAGAAAATTCTTGCTGCAGTAC TTTGGCGAAGACCGCACCACTGACTGTGGTAATTGTGAAAATTGCACAAGGACAAAAAAC GAGAGGGATTTGTCAAAAGAATCCTTCTTGTTGCTGTCCTGCATTAAGTCCTGTGGTGGA CGGTGGGGCCTTAATTTGCCTATTGATGTTCTCCGTGGATCACGTGTCAAGAAAATAGTT GAAAACAATTTTGATAAACTTCCATTGCATGGGCGGGGAAAAGACTATCCACCAAACTGG TGGAAAGCTCTTGGCGGCCTGCTTTTAGCACATGATTATTTGAAGGAGACTGTCCATGAT ACATTTAGATCCATCAGTGTTAGTCCTAATGGGTACAAGTTTCTATCCACTGCTGATAAA GGGGATGGAGCATCGCTGTTTTTACAGCTGACTGCAGAGATGATTGAGCTAGAGGGGCAT GGTGGTTCACAGTGTAAAGAAGAGGGCTTAAATCCTTTGGGCCCATCAGAATCTGAAAAA ATTTCTGAGGATGAATTGAAAATCTACCAAGTACTCTTGAATGTCAGGATGCAACTTGCA CAAGATATTGGAACGGCGCCGTACGCTATATGTGGTGATCAGACACTAAGAAACTTTGCG AAGTTCAGGCCTAGCACCATAGCTAGGTTGGCTAATATTGATGGTGTTAACCAGCACTTC ATCTCGCATTACGGCAGTATTTTCATCCAAAATATCACACAATTGGCAAAAGAATTGAAT CTTCCTGTGGATGATTTATCGGCTGTAGAAAGTATACCTGCTGCTCCAAAACCTACACAA AATAATCTCCCAAGGAGTTTGGGTGGCGCGAAATTTTGTTCATGGGAATTGTGGCAGAAA ATGAAGTTTTCGTTCCAGAAAGTTGCGCATTACCGCAGAGCAGTACCAATAAAAGAGAAA ACAGTCATTTCCTACATACTTGATGCTGCTCGAGATGGATGTGAGATGGACTGGAGTAGG TTTTGTGAGGAGGTAGGACTTACACATGAGATAGCCTCACAGATCCGTCTTGCCATTACA AAGCTTGGATCACATGAAAAGTTGAAGCCAATCAAAGATGAACTTCCAGAAAATGTAACT TATGAGATGATCCAGACATTCTTGGCAATTGAGGGACTTGGATTGTCGGATCAAGTTTTT GGTACTGTTCCTACTGATGGGATCCAGTCCAAGACATCAGAGGCACCAAAGACCACCTCC AATGGAGGTGAAGTTGGCGCAGATGTTTGTGATGCAAGCCCTTTGACAAGGAGAGGCCAA ACTGATGGGTCATTGATTTGTGGTGATGAGCCAGCAAGTAAACTACAAAAGATAGACGGG CAAGGTGTAAATTCTACTGCCGCAATCGGTGCCACAGAGGATGCAATACTAGAACTGGTT GAAGGACGCAATGGGGTTTCGTTGGAGGATGTTGTCAAGCACTTCAATGGGTCGAAAAGA GAATGTGTCGTCGAGATGTTGGACAATCTGGAAGGCAATTTTCTGGTGTACAAGAAGAAT GGCTGCTACATGATTATGTGA

Peptide Sequence

PEP ID	Os07t0681600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:28901514:28908685:1 gene:Os07g0681600 transcript:Os07t0681600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA helicase, ATP-dependent, RecQ type domain containing protein. (Os07t0681600-01)
Sequence	MEAALKTYFGFSGFRSYQREIIQKVLEGRDCLVVMATGSGKSICYQIPPLVTKKTAVVVS PLLSLMQDQVMSLKQHGVKSEYLGSTQTDISVSGQAEKGAFDVLYMTPEKAVSLPSRFWS NLQAAGICLLAVDEAHCISEWGHDFRTEYKQLHMLRDLLVGVPFVALTATATQRVRGDIA TSLTLRIPHIVVGSFDRPNLFYGVKSCNRSMAFINELVKDVSKNCTVGGSTIIYCTTIRE TEQVHEALVAAGIKSSIYHGRMGNKAREESHRSFVRDEVLVMVATIAFGMGIDKPDVRCV IHYGCPKSLESYYQESGRCGRDGLPSVCWLYYQRSDFMKSDFYCAEAKSQTHRKAIMESF MAAQKYCLLATCHRKFLLQYFGEDRTTDCGNCENCTRTKNERDLSKESFLLLSCIKSCGG RWGLNLPIDVLRGSRVKKIVENNFDKLPLHGRGKDYPPNWWKALGGLLLAHDYLKETVHD TFRSISVSPNGYKFLSTADKGDGASLFLQLTAEMIELEGHGGSQCKEEGLNPLGPSESEK ISEDELKIYQVLLNVRMQLAQDIGTAPYAICGDQTLRNFAKFRPSTIARLANIDGVNQHF ISHYGSIFIQNITQLAKELNLPVDDLSAVESIPAAPKPTQNNLPRSLGGAKFCSWELWQK MKFSFQKVAHYRRAVPIKEKTVISYILDAARDGCEMDWSRFCEEVGLTHEIASQIRLAIT KLGSHEKLKPIKDELPENVTYEMIQTFLAIEGLGLSDQVFGTVPTDGIQSKTSEAPKTTS NGGEVGADVCDASPLTRRGQTDGSLICGDEPASKLQKIDGQGVNSTAAIGATEDAILELV EGRNGVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCYMIM

Transcript Sequence

Transcript ID	Os07t0681600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28901514:28908685:1 gene:Os07g0681600 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA helicase, ATP-dependent, RecQ type domain containing protein. (Os07t0681600-01)
Sequence	GTCCTCCCATTCCCCTTCCACTCCACCCCAGCCGCCTCGCCTCGCCTTCTTCTTCCCGAA GCCGCTCAATCGAACTCCCCTCGCCGAAGCCGACGCGGGGGCGCGACCGCGCGCGCGAGC CCCATACCACGTACGATGGAGGCAGCTCTGAAGACGTATTTCGGCTTCTCGGGGTTCCGT TCGTACCAGCGGGAGATCATACAGAAGGTCCTGGAAGGCCGGGATTGCTTGGTCGTCATG GCCACCGGCAGCGGCAAGTCGATCTGTTATCAAATCCCACCACTTGTTACAAAGAAGACA GCTGTTGTTGTCAGCCCTCTTCTGTCATTGATGCAAGACCAGGTCATGAGCTTAAAGCAG CATGGCGTGAAGTCTGAATACCTTGGCAGCACCCAAACAGACATCTCTGTTAGCGGTCAG GCTGAAAAAGGCGCATTCGATGTTCTGTACATGACACCAGAGAAAGCTGTCTCACTTCCT TCAAGGTTTTGGAGTAACTTGCAGGCTGCCGGAATCTGCTTGTTGGCTGTCGATGAAGCA CACTGCATATCAGAATGGGGCCACGATTTCAGAACGGAGTACAAACAGTTGCATATGTTG CGTGACCTTCTAGTGGGTGTTCCCTTTGTCGCTTTAACTGCAACAGCCACACAAAGGGTA CGTGGAGACATTGCCACTTCCTTGACCCTGCGCATTCCTCACATTGTGGTAGGATCATTT GATCGTCCTAACCTTTTCTATGGCGTGAAATCATGCAACCGGTCTATGGCCTTTATCAAT GAACTTGTGAAGGATGTCTCAAAGAACTGTACTGTGGGTGGCTCAACAATAATATACTGT ACTACCATCCGAGAGACTGAACAGGTGCATGAGGCATTGGTTGCTGCTGGAATCAAGTCC AGCATTTACCATGGTAGAATGGGAAATAAAGCTAGAGAGGAATCACATAGATCGTTTGTT AGAGATGAAGTACTTGTGATGGTGGCTACCATTGCTTTTGGAATGGGAATCGACAAGCCA GATGTTAGATGTGTAATACATTATGGATGTCCAAAGAGCCTGGAATCCTACTACCAGGAA AGTGGGCGTTGTGGAAGAGATGGACTGCCTTCAGTCTGCTGGCTATATTACCAAAGAAGT GATTTTATGAAATCTGATTTCTATTGTGCTGAAGCTAAAAGTCAAACTCATCGAAAAGCC ATCATGGAGTCCTTCATGGCAGCACAAAAATATTGCCTGCTTGCTACATGTCACAGAAAA TTCTTGCTGCAGTACTTTGGCGAAGACCGCACCACTGACTGTGGTAATTGTGAAAATTGC ACAAGGACAAAAAACGAGAGGGATTTGTCAAAAGAATCCTTCTTGTTGCTGTCCTGCATT AAGTCCTGTGGTGGACGGTGGGGCCTTAATTTGCCTATTGATGTTCTCCGTGGATCACGT GTCAAGAAAATAGTTGAAAACAATTTTGATAAACTTCCATTGCATGGGCGGGGAAAAGAC TATCCACCAAACTGGTGGAAAGCTCTTGGCGGCCTGCTTTTAGCACATGATTATTTGAAG GAGACTGTCCATGATACATTTAGATCCATCAGTGTTAGTCCTAATGGGTACAAGTTTCTA TCCACTGCTGATAAAGGGGATGGAGCATCGCTGTTTTTACAGCTGACTGCAGAGATGATT GAGCTAGAGGGGCATGGTGGTTCACAGTGTAAAGAAGAGGGCTTAAATCCTTTGGGCCCA TCAGAATCTGAAAAAATTTCTGAGGATGAATTGAAAATCTACCAAGTACTCTTGAATGTC AGGATGCAACTTGCACAAGATATTGGAACGGCGCCGTACGCTATATGTGGTGATCAGACA CTAAGAAACTTTGCGAAGTTCAGGCCTAGCACCATAGCTAGGTTGGCTAATATTGATGGT GTTAACCAGCACTTCATCTCGCATTACGGCAGTATTTTCATCCAAAATATCACACAATTG GCAAAAGAATTGAATCTTCCTGTGGATGATTTATCGGCTGTAGAAAGTATACCTGCTGCT CCAAAACCTACACAAAATAATCTCCCAAGGAGTTTGGGTGGCGCGAAATTTTGTTCATGG GAATTGTGGCAGAAAATGAAGTTTTCGTTCCAGAAAGTTGCGCATTACCGCAGAGCAGTA CCAATAAAAGAGAAAACAGTCATTTCCTACATACTTGATGCTGCTCGAGATGGATGTGAG ATGGACTGGAGTAGGTTTTGTGAGGAGGTAGGACTTACACATGAGATAGCCTCACAGATC CGTCTTGCCATTACAAAGCTTGGATCACATGAAAAGTTGAAGCCAATCAAAGATGAACTT CCAGAAAATGTAACTTATGAGATGATCCAGACATTCTTGGCAATTGAGGGACTTGGATTG TCGGATCAAGTTTTTGGTACTGTTCCTACTGATGGGATCCAGTCCAAGACATCAGAGGCA CCAAAGACCACCTCCAATGGAGGTGAAGTTGGCGCAGATGTTTGTGATGCAAGCCCTTTG ACAAGGAGAGGCCAAACTGATGGGTCATTGATTTGTGGTGATGAGCCAGCAAGTAAACTA CAAAAGATAGACGGGCAAGGTGTAAATTCTACTGCCGCAATCGGTGCCACAGAGGATGCA ATACTAGAACTGGTTGAAGGACGCAATGGGGTTTCGTTGGAGGATGTTGTCAAGCACTTC AATGGGTCGAAAAGAGAATGTGTCGTCGAGATGTTGGACAATCTGGAAGGCAATTTTCTG GTGTACAAGAAGAATGGCTGCTACATGATTATGTGAAATTAAAGATCTGAAGGAATGTTA CCAGTTGGTTGTCAATGCTAGTAACCCCATATCTAGGAACATATACGGTCTCAAATGATG TATATATAAAATTTAGTGGTAATGAGTGTAGGCTTCTTTCCCTCTTTATCCGTATGAAAA ATTCACCTGTTCATCACTAACAACTGATCTTTAGTTCATTCAGTTTTTTCTGCTTGTTCA GAGTTTAGAAACTAGTGCCGTTTGGCCTTGAAGGATCATCATATCCAGTGACCCTGATTC GTTGTAGAAGAATCAGAGTCTGCTCCTAGCCTCAAATATGATCAAGTTTTTTTC