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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0681200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28877263:28879413:1 gene:Os07g0681200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vegetative storage protein/acid phosphatase domain containing protein. (Os07t0681200-01)
Sequence

ATGGCCGCTCTCGCCGTGCTGCTGCTGGTGGTTGCGGCGGTGGAGGGCGGCGCGGCGTGG
TCGTTCTGGCCGCCGGCGGCCGGCGACGAGCCGTACTGCCTCAGCTGGCGGGTGATGGTG
GAGGCCAACAACGCCAAGAACTGGCCCACCGTGCCGCCGCCGTGCGTCGGCTACGTCTGG
AGATACATGGCGTGGGGGCAGTACGCCCGCGACGTGGCCGGCGTCGCCGACCAGATCGCC
GCCTACGCCGCCCAGCTCGCCGCCGGCGACGACGGCCTCGACGCCTGGGTGTTCGACGTC
GACGACACGTGCCTGTCCAACCTCTTCTACTACCAGGCAAAGCAATTCGGGGCGTATGAT
CCGGTGGCGTTCAAGAAGTGGGCGAGCAAGGCGATCTGCCCGGGGGTACCTGGCATGGCG
CAGCTGTTCCAGATGCTCAGAGGCAGAGGATTCAGAGTCTTCATCCTCTCCGGCCGAGAC
CAGCAGACTCTCGCCTCCAGCACCGCCGCCAACCTCGCCGCGGCCGGCTTCGCCGGCTAC
GACCGGCTCATCATGAGAAGCGCGGAGTACCGGGGAATGAGCGCGGTGGTGTTCAAGTCG
GCGATGAGAATGCAGCTGATGGAGGAGGGGTACAGGATACGCGGCAATGTGGGTGACCAG
TGGAGCGATCTGCAGGGTGACTTCGTCGGCGACCGTGTCTTCAAAGTGCCCAACCCAATG
TACTTTGTTCCATGA

Peptide Sequence

PEP ID

Os07t0681200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28877263:28879413:1 gene:Os07g0681200 transcript:Os07t0681200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vegetative storage protein/acid phosphatase domain containing protein. (Os07t0681200-01)
Sequence

MAALAVLLLVVAAVEGGAAWSFWPPAAGDEPYCLSWRVMVEANNAKNWPTVPPPCVGYVW
RYMAWGQYARDVAGVADQIAAYAAQLAAGDDGLDAWVFDVDDTCLSNLFYYQAKQFGAYD
PVAFKKWASKAICPGVPGMAQLFQMLRGRGFRVFILSGRDQQTLASSTAANLAAAGFAGY
DRLIMRSAEYRGMSAVVFKSAMRMQLMEEGYRIRGNVGDQWSDLQGDFVGDRVFKVPNPM
YFVP

Transcript Sequence

Transcript ID

Os07t0681200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28877263:28879413:1 gene:Os07g0681200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vegetative storage protein/acid phosphatase domain containing protein. (Os07t0681200-01)
Sequence

ATCTCGCTGTCTGCGAGCGACGACATGGCCGCTCTCGCCGTGCTGCTGCTGGTGGTTGCG
GCGGTGGAGGGCGGCGCGGCGTGGTCGTTCTGGCCGCCGGCGGCCGGCGACGAGCCGTAC
TGCCTCAGCTGGCGGGTGATGGTGGAGGCCAACAACGCCAAGAACTGGCCCACCGTGCCG
CCGCCGTGCGTCGGCTACGTCTGGAGATACATGGCGTGGGGGCAGTACGCCCGCGACGTG
GCCGGCGTCGCCGACCAGATCGCCGCCTACGCCGCCCAGCTCGCCGCCGGCGACGACGGC
CTCGACGCCTGGGTGTTCGACGTCGACGACACGTGCCTGTCCAACCTCTTCTACTACCAG
GCAAAGCAATTCGGGGCGTATGATCCGGTGGCGTTCAAGAAGTGGGCGAGCAAGGCGATC
TGCCCGGGGGTACCTGGCATGGCGCAGCTGTTCCAGATGCTCAGAGGCAGAGGATTCAGA
GTCTTCATCCTCTCCGGCCGAGACCAGCAGACTCTCGCCTCCAGCACCGCCGCCAACCTC
GCCGCGGCCGGCTTCGCCGGCTACGACCGGCTCATCATGAGAAGCGCGGAGTACCGGGGA
ATGAGCGCGGTGGTGTTCAAGTCGGCGATGAGAATGCAGCTGATGGAGGAGGGGTACAGG
ATACGCGGCAATGTGGGTGACCAGTGGAGCGATCTGCAGGGTGACTTCGTCGGCGACCGT
GTCTTCAAAGTGCCCAACCCAATGTACTTTGTTCCATGATAATATGATACTCTAATCGCC
CATCAAACATGTGTTCGCACATACGCACTTCGTTACACGGAGTATATATGTAACTATTTC
TTTTTTAGACAG