Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0679700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:28786471:28793002:-1 gene:Os07g0679700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VP1/ABI3-LIKE 2 description:Transcriptional factor B3 family protein. (Os07t0679700-01)
Sequence	ATGGCGGGGATGGCTGCGGCGGCGGCGGCGTTGGTGGCGGCGAAGAGGTGCATGAACGCC GCGTGCGGGGCCCCGGCCCCGTCCCCGGCGGGAGGGGAGTGGAGGAAGGGCTGGCCGCTG CGATCCGGTGGCTTCGCCGTGCTCTGCGACAAGTGCGGGTTGGCATATGAGCAGCTTGTG TTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGAGGGACTGCTCATTTTGTGGGAAG CGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCTTTGATCTACTTGATAGCGGTGGA GTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTCAATCTGTTCCAAGTCCAGTCGTC CCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTTTTGGCAAAAGCGATGATTTATTG TCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCGATGCCAGAAACGATGATCTTACT ATTATCGCTAAGAACAACCTTCCATTCATGGTGAAAAACGTAGAAGCTGGGCAAAGCAGT AATATTTTGAGGCAAAAAGAACTAGAGAATGGTGCGAGGCAGATTAAATGGGAACTACCT ACCCTTAGTATCGGGGACATGGGAAGGATACCTTTCCTAACTAGATCTCAAAGTGCATTG GAGTCTCGAAGAGATGAAAATAAAGACCCAACTACAGAAAGCACGACAAGTGAATCACTT TCTGAGGCATGCCTCAACATGAGCTTGGGAATTGCTAGTAATGGAAACAAGTTGGAGGCT ACTTCAACTGTGGAAAGACCTATGCTATCACCAACAACAGGATTTCCTGAAGGAAGAGAG CTTACCACTGCATTATCTCCATTTCAGCATGCACAAAGGGCTCGTCATTTTCTGACCAGA CCGCCAAGGGTTGGTGAAGGTGCTGTTTTTGATCCAACGAAAGATATGCTTCCGCATCTT CGTGTTGCAAGGCCACCTGCAGAAGGTAGGGGCCGCAATCAATTACTTCCTCGATATTGG CCTAGAATAACAGACCAAGAGCTACAGCAAATTTCTGGAGATTCAAATTCCACCATTGTC CCCCTGTTTGAGAAGGTTCTAAGCGCCAGTGATGCAGGCCGCATAGGGCGCCTTGTTCTA CCAAAAGCCTGTGCGGAGGCATATTTCCCTCCAATTTCTCAGCCAGAAGGTCGTCCTTTG ACAATTCAAGACGCAAAAGGCAAAGAATGGCATTTTCAGTTCAGATTCTGGCCAAATAAC AACAGCAGAATGTATGTCTTGGAGGGGGTTACACCATGCATACAATCATTACAATTACAG GCTGGTGATACAGTGACTTTTAGTCGGATAGAACCTGGAGGGAAACTTGTTATGGGCTTC CGGAAGGCCACAAACACTGTCAGTTTGCCAGACTCACAGATTTCAGCTATTGCCAACGGT TCCATTCTTGGGGATACATTATTTTCTAGTACAAATGAGAATTTAGCAATAGTAAGTGGT TATTCAGGATTTCTTCAGTCAATAAAGGGGGCTGCAGATCTCCATACAAGCTCTATATAC GATCATCATGTGAACTCAGCTGACGGGGATGTTAGTTGGCTTAAGACAGATAAATTCGGC AGCAGGCCAGATGAGGGGTCTTTGCAGTTTTTAAAGAGAGGCCGCAATATTGGTTCCAAA AGCAGGAGGCTTTCAATGGATGCTGAAGAAGCCTGGGAACTAAAGCTTTACTGGGATGAG GTTCAGGAGCTGTTGCGTCCTGCTCCAACTGCAAAACCTACTGTCGTGATGATTGAGGAC TACGAAATTGAAGAGTATGATGAACCCCCTGTGTTTGCAAAGAGATCAATTTTTACCATC CGTTCTACTGGGGAACAAGATCAATGGATTCAATGTGATGATTGCTCAAAATGGCGCCGG TTACCACTTAATGTTATTGTTGCATCCAAGTGGACATGTGCTGACAACACAATCGACTCA AAAAGCTGTTCCTGCTCTGCACCTGAAGAATTAACCCCCAAAGAATTGCACATTGTTCTT CAGCAATACGAAGATATGAGGAGGCGAAGGAACAGCTTTGGTTTTAAGCAGAACATCCCC GAAATGGATGCGGTCAGCCTTGATGCCTTTGCCACTGCCGCAGTCTATGGTGATGTCGGG AACCAAGGTTCCCCTTCTGTTGCGACAACCACAAAGCACCCCCGGCATCGCCCTGGCTGC ACCTGCATAGTGTGTATCCAGCCACCTAGCGGGAAGGGCCCGAAGCACAACCCAGCTTGC ACCTGCAATGTCTGCATGACCGTTAGGCGTCGCTTCAAGACACTGATGATGAGGAAGAAG CAACGGCAGTCGGAGCGAGAGGAGGCCGAGGCGAGCAAGAAGATCGCTTGGATGAACAGA GATGAGCCTGAGGGAAGCAGCCTGTCAAGATCCCCACAGACGGTTGACACTACCCGAGAC GGAGATGTGACCATGTTCGACAAGGTTGACATCAACAAGGGCCACATAGACCTGAACTTC CACCCTACTGCCGTCCGAGACGAGGAGCGGCATGGCGGGCAGCCTCGGGTGAGCATGGTC AGCCTCCTGGAGGTGGCCAACCGGCCACTGGAGAACTACATGAAGCAGAACGGCCTGACG AGCTTGGCTGGGGAGCAAGGGAGCTCCAGCACATGTACAGGTGCAGCCACGGTTCCGCAG CCGGCTCTGGTGGAGAGCGAAGAGCGGACGTCCAACAACGACGGCGGGCGTGTGGCGACG GCAGAGCAGCCGGAGAGCATGGCCGTCGACGAGGCTGGAGATAACCAGCCGGACAAGGCT GCCGGTGACTCTGCTGCTGCTTTAGCTTGA

Peptide Sequence

PEP ID	Os07t0679700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:28786471:28793002:-1 gene:Os07g0679700 transcript:Os07t0679700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VP1/ABI3-LIKE 2 description:Transcriptional factor B3 family protein. (Os07t0679700-01)
Sequence	MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLV FCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVV PKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNVEAGQSS NILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQSALESRRDENKDPTTESTTSESL SEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTR PPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIV PLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFWPNN NSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTVSLPDSQISAIANG SILGDTLFSSTNENLAIVSGYSGFLQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFG SRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIED YEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDS KSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVG NQGSPSVATTTKHPRHRPGCTCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKK QRQSEREEAEASKKIAWMNRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNF HPTAVRDEERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQ PALVESEERTSNNDGGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA

Transcript Sequence

Transcript ID	Os07t0679700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28786471:28793002:-1 gene:Os07g0679700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VP1/ABI3-LIKE 2 description:Transcriptional factor B3 family protein. (Os07t0679700-01)
Sequence	AGCAGGAGTAATTCTTCAGTCTCCTCTTCTTGCTCCCCCCATCTGGTTGGTTTTCCTTTT CTTCCCCGCATCCGCACCCGAGTCGCCAGCGATCGATCGTTTTGGTTTGGTGCCATCTCC ACATCCACCGGAAAACTACGCTTCCCCTACCCACCGCATCATCCTCTTGCCTCGATCTTT ACTGCTCTCTACTAGGCTCGAGCTGTGTGGGTGGGGTGATGCGGTGAGCTTTTCTTTTTC TTCTTCTATTGATCGGAGTGGCCATGGCGGGGATGGCTGCGGCGGCGGCGGCGTTGGTGG CGGCGAAGAGGTGCATGAACGCCGCGTGCGGGGCCCCGGCCCCGTCCCCGGCGGGAGGGG AGTGGAGGAAGGGCTGGCCGCTGCGATCCGGTGGCTTCGCCGTGCTCTGCGACAAGTGCG GGTTGGCATATGAGCAGCTTGTGTTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGA GGGACTGCTCATTTTGTGGGAAGCGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCT TTGATCTACTTGATAGCGGTGGAGTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTC AATCTGTTCCAAGTCCAGTCGTCCCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTT TTGGCAAAAGCGATGATTTATTGTCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCG ATGCCAGAAACGATGATCTTACTATTATCGCTAAGAACAACCTTCCATTCATGGTGAAAA ACGTAGAAGCTGGGCAAAGCAGTAATATTTTGAGGCAAAAAGAACTAGAGAATGGTGCGA GGCAGATTAAATGGGAACTACCTACCCTTAGTATCGGGGACATGGGAAGGATACCTTTCC TAACTAGATCTCAAAGTGCATTGGAGTCTCGAAGAGATGAAAATAAAGACCCAACTACAG AAAGCACGACAAGTGAATCACTTTCTGAGGCATGCCTCAACATGAGCTTGGGAATTGCTA GTAATGGAAACAAGTTGGAGGCTACTTCAACTGTGGAAAGACCTATGCTATCACCAACAA CAGGATTTCCTGAAGGAAGAGAGCTTACCACTGCATTATCTCCATTTCAGCATGCACAAA GGGCTCGTCATTTTCTGACCAGACCGCCAAGGGTTGGTGAAGGTGCTGTTTTTGATCCAA CGAAAGATATGCTTCCGCATCTTCGTGTTGCAAGGCCACCTGCAGAAGGTAGGGGCCGCA ATCAATTACTTCCTCGATATTGGCCTAGAATAACAGACCAAGAGCTACAGCAAATTTCTG GAGATTCAAATTCCACCATTGTCCCCCTGTTTGAGAAGGTTCTAAGCGCCAGTGATGCAG GCCGCATAGGGCGCCTTGTTCTACCAAAAGCCTGTGCGGAGGCATATTTCCCTCCAATTT CTCAGCCAGAAGGTCGTCCTTTGACAATTCAAGACGCAAAAGGCAAAGAATGGCATTTTC AGTTCAGATTCTGGCCAAATAACAACAGCAGAATGTATGTCTTGGAGGGGGTTACACCAT GCATACAATCATTACAATTACAGGCTGGTGATACAGTGACTTTTAGTCGGATAGAACCTG GAGGGAAACTTGTTATGGGCTTCCGGAAGGCCACAAACACTGTCAGTTTGCCAGACTCAC AGATTTCAGCTATTGCCAACGGTTCCATTCTTGGGGATACATTATTTTCTAGTACAAATG AGAATTTAGCAATAGTAAGTGGTTATTCAGGATTTCTTCAGTCAATAAAGGGGGCTGCAG ATCTCCATACAAGCTCTATATACGATCATCATGTGAACTCAGCTGACGGGGATGTTAGTT GGCTTAAGACAGATAAATTCGGCAGCAGGCCAGATGAGGGGTCTTTGCAGTTTTTAAAGA GAGGCCGCAATATTGGTTCCAAAAGCAGGAGGCTTTCAATGGATGCTGAAGAAGCCTGGG AACTAAAGCTTTACTGGGATGAGGTTCAGGAGCTGTTGCGTCCTGCTCCAACTGCAAAAC CTACTGTCGTGATGATTGAGGACTACGAAATTGAAGAGTATGATGAACCCCCTGTGTTTG CAAAGAGATCAATTTTTACCATCCGTTCTACTGGGGAACAAGATCAATGGATTCAATGTG ATGATTGCTCAAAATGGCGCCGGTTACCACTTAATGTTATTGTTGCATCCAAGTGGACAT GTGCTGACAACACAATCGACTCAAAAAGCTGTTCCTGCTCTGCACCTGAAGAATTAACCC CCAAAGAATTGCACATTGTTCTTCAGCAATACGAAGATATGAGGAGGCGAAGGAACAGCT TTGGTTTTAAGCAGAACATCCCCGAAATGGATGCGGTCAGCCTTGATGCCTTTGCCACTG CCGCAGTCTATGGTGATGTCGGGAACCAAGGTTCCCCTTCTGTTGCGACAACCACAAAGC ACCCCCGGCATCGCCCTGGCTGCACCTGCATAGTGTGTATCCAGCCACCTAGCGGGAAGG GCCCGAAGCACAACCCAGCTTGCACCTGCAATGTCTGCATGACCGTTAGGCGTCGCTTCA AGACACTGATGATGAGGAAGAAGCAACGGCAGTCGGAGCGAGAGGAGGCCGAGGCGAGCA AGAAGATCGCTTGGATGAACAGAGATGAGCCTGAGGGAAGCAGCCTGTCAAGATCCCCAC AGACGGTTGACACTACCCGAGACGGAGATGTGACCATGTTCGACAAGGTTGACATCAACA AGGGCCACATAGACCTGAACTTCCACCCTACTGCCGTCCGAGACGAGGAGCGGCATGGCG GGCAGCCTCGGGTGAGCATGGTCAGCCTCCTGGAGGTGGCCAACCGGCCACTGGAGAACT ACATGAAGCAGAACGGCCTGACGAGCTTGGCTGGGGAGCAAGGGAGCTCCAGCACATGTA CAGGTGCAGCCACGGTTCCGCAGCCGGCTCTGGTGGAGAGCGAAGAGCGGACGTCCAACA ACGACGGCGGGCGTGTGGCGACGGCAGAGCAGCCGGAGAGCATGGCCGTCGACGAGGCTG GAGATAACCAGCCGGACAAGGCTGCCGGTGACTCTGCTGCTGCTTTAGCTTGAGCTTGAG GCTGACCGTGTTGAGTGTGTGGATGGCAGGATGGGTATTGAATTTGTTGTGTGTGCATCT TATCGGCTTCCCCCTTTTTTTACAGGAACAGCAGCTGGTGAGTTTTGATGTTGAGAATCT CATAGGGTTTCATTGTGTTCTTGTAGTCCTTCACTTGCTTTCTTGTGTAAACACACGTGT AGAAGGCTGTATGATACTGACTGTACCTTGTAATTTTTAACCACGAGGCTCACCTTATTT GCTCATACCTCGGTGGGCAGCTAGTTGTTGTATGTATCCAAAGC