Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0676600-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28649695:28651518:1 gene:Os07g0676600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 163 description:Similar to DNA binding protein. (Os07t0676600-01)
Sequence

ATGATGTCGAGAGAACGCAAGAAGGCAGCTGCTCTACACGAGAAGCTGCAGATCCTGCGC
TCCATCACTCACTCCCACGCGCTCAGCAACACCTCCATAATCACGGACGCGTCAGAGTAC
ATCAAGGAGCTAAAGCAGAAGGTTGTCAGGCTCAACAAGGAGATCGCATGCGCAGAAGCT
GCAGCACTCAGACAGAACTCCATCCCCACGGTGACGGTGGAAACCCTAGGGCACGGGTTC
CTCATCAACGTGTTCTCTGACAAGAGCTGCCCCGGGTTGCTTGTTTCTATCCTGGAAGCC
TTCGATGAGCTGGGCCTCAATGTACTCGAAGCAACGGCATCTTGCGACGATACCTTCCGT
CTTGAGGCTGTAGGAGGAGAGAACCAGGTGGATGAGCATGTCATCAAGCAAACGGTGCTC
CAGGCCATCAGCAACAGCAACTGCTCGGAGAGCAGCGGTGACCAGGAGGGGTAG

Peptide Sequence

PEP ID

Os07t0676600-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28649695:28651518:1 gene:Os07g0676600 transcript:Os07t0676600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 163 description:Similar to DNA binding protein. (Os07t0676600-01)
Sequence

MMSRERKKAAALHEKLQILRSITHSHALSNTSIITDASEYIKELKQKVVRLNKEIACAEA
AALRQNSIPTVTVETLGHGFLINVFSDKSCPGLLVSILEAFDELGLNVLEATASCDDTFR
LEAVGGENQVDEHVIKQTVLQAISNSNCSESSGDQEG

Transcript Sequence

Transcript ID

Os07t0676600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28649695:28651518:1 gene:Os07g0676600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 163 description:Similar to DNA binding protein. (Os07t0676600-01)
Sequence

AGTACTCATCACCTTCCTTTGAAGCAGCAGGTCGTAGCTAGCTAGACACCCGCGCTCGCT
CGTCTCCATTGAAGCGAGAAATAAAGTAGAAAGACACAGACACACTTGAGTAGAATTTTA
GAGATGATGTCGAGAGAACGCAAGAAGGCAGCTGCTCTACACGAGAAGCTGCAGATCCTG
CGCTCCATCACTCACTCCCACGCGCTCAGCAACACCTCCATAATCACGGACGCGTCAGAG
TACATCAAGGAGCTAAAGCAGAAGGTTGTCAGGCTCAACAAGGAGATCGCATGCGCAGAA
GCTGCAGCACTCAGACAGAACTCCATCCCCACGGTGACGGTGGAAACCCTAGGGCACGGG
TTCCTCATCAACGTGTTCTCTGACAAGAGCTGCCCCGGGTTGCTTGTTTCTATCCTGGAA
GCCTTCGATGAGCTGGGCCTCAATGTACTCGAAGCAACGGCATCTTGCGACGATACCTTC
CGTCTTGAGGCTGTAGGAGGAGAGAACCAGGTGGATGAGCATGTCATCAAGCAAACGGTG
CTCCAGGCCATCAGCAACAGCAACTGCTCGGAGAGCAGCGGTGACCAGGAGGGGTAGAGC
AATGGTGATCTTCCATTTGCATTGGATGGCATTTTGATCAGGACAATCATATCGCGCTTA
TGGACTGCAGCTAGCTGAATTTCATTTCCCTATCTAGCTTCTTGCTCGATCAGTTGCAAA
TTTTCCGTGACTCTTCTCTTGATTGACATCTACCCGAGATGATGAGCTGCAAATATCTAT
GTCAGATGAAACCCTAGCATCCCCTTGTACTACCAGATAATGATATTATATATGTGTACG
TACGTAGTCCATAATCCATATATGGAGATTGGCAAGGTGTAAGATATGCTAGCTAGCTGT
ACGTTCATTGTACTACTGATATGATGACCATAGTAAGCTCATATATGTTTGCCC