Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0675100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:28559086:28562956:-1 gene:Os07g0675100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 22 description:Similar to Pectin methylesterase isoform alpha (EC 3.1.1.11) (Fragment). (Os07t0675100-01)
Sequence	ATGCCACCTCCAAGAACCAAGCACCGGCCGCTTCTCCTCGCCACCACCTTCCTCTCCCTT CTGCTGCTGCTGCTGCTGCTCAGCTTGCTCTCCACCGCGCACAAGGCATTCGCCGTCGCT GACGACGACGGCCACCGCGCGCGCGTGCTTCTTGCAGCAGACGGCGGCGAGAGGAATGCC GATGCCGAGCACGCGGCCGCCGTGGACCGGCATTGCGCCGGGACGCTCCACCGGGACGTC TGCGTGTCGACGCTGTCCACCATCCCGAACCTCGCGCGGAAGCCGCTCCGGGACGTGATC TCCGAGGTCGTGGGGCGCGCCGCGTCGGCGGTGCGCGCGTCGTCGTCCAACTGCACGTCC TACCTCCAGCGGCCGCGGCAGCTGCGCACGCGCGACCGCCTCGCGCTGTCCGACTGCCTC GAGCTGTTCGGGCACACGCTGGACCTGCTGGGCACGGCGGCCGCGGAGCTCTCCGCCGGG AACAGCACCGCCGAGGAGTCCGCCGCCGGCGTGCAGACCGTGCTGTCGGCGGCGATGACG AACCAGTACACCTGCCTCGACGGGTTCGCCGGGCCGTCCGCCTCGGAGGACGGGCGCGTC CGGCCGTTCATCCAGGGCCGCATCTACCACGTCGCCCACCTGGTCTCCAACTCGCTCGCC ATGGTGCGGCGCCTCCCGACCCAGCGGCGGCGCGGGGCGGAGGAGGAGCCATTGGAAGGG TACGGCCGCGTGCGACGCGGGTTCCCGTCGTGGGTGTCGGCGTCGGACCGGAGGCGGCTG CAGCAGCAGGTGGCGGCGGACGTGGTGGTGGCGAAGGACGGGAGCGGGAAGTTCACGACG GTGAGCGAGGCGGTGGCGGCGGCGCCGAACAACAGCGAGACGCGGTACGTGATATACATC AAGGCCGGCGGGTACTTCGAGAACGTGGAGGTCGGGAGCGAGAAGACCAACATCATGTTC GTCGGCGACGGCACGTGGAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACAACTCC ACCACCTTCCGCTCTGCCACGCTCGCCGTGGTGGGCACGGGGTTTCTGGCGCGGGACATA ACGGTGGAGAACGCGGCGGGGCCGAGCAAGCACCAGGCGGTGGCGCTGCGGGTGAACGCC GACCTGTCGGCGTTCTACCGGTGCAGCTTCGCGGGCTACCAGGACACGCTGTACGCGCAC TCGCTTCGCCAGTTCTACCGCGACTGCGACATCTACGGCACGGTGGACTTCATCTTCGGC GACGCCGCCGTCGTGCTCCAGAACTGCAACCTCTACGCGCGCCGCCCGGACCCCAACCAG AAGAATGTGTTCACGGCGCAGGGCCGGGAGGACCCCAACCAGAACACCGGCATCGCCATC CAGGGCTGCAAGGTCGCCGCCGCCGCCGACCTCGTCCCCGTCCAGGCCAACTTCTCCTCC TACCTCGGCCGCCCGTGGAAGACCTACTCGCGCACGGTGTTCCTGCAGTCCAAGATCGAC AGCCTGATACACCCCAGGGGGTGGCTCGAGTGGAACGGCAGCTTCGCGCTCGACACGCTC TACTACGCCGAGTACATGAACCGCGGCGACGGCGCCGACACGTCGGCGAGGGTGTCGTGG CCGGGGTACCACGTGCTCACCAACGCCACCGACGCGGCCAACTTCACCGTGCTCAACTTC GTGCAGGGTGACCTCTGGCTCAACTCCAGCTCGTTCCCCTACATCTTGGGGTTGAGCTGA

Peptide Sequence

PEP ID	Os07t0675100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:28559086:28562956:-1 gene:Os07g0675100 transcript:Os07t0675100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 22 description:Similar to Pectin methylesterase isoform alpha (EC 3.1.1.11) (Fragment). (Os07t0675100-01)
Sequence	MPPPRTKHRPLLLATTFLSLLLLLLLLSLLSTAHKAFAVADDDGHRARVLLAADGGERNA DAEHAAAVDRHCAGTLHRDVCVSTLSTIPNLARKPLRDVISEVVGRAASAVRASSSNCTS YLQRPRQLRTRDRLALSDCLELFGHTLDLLGTAAAELSAGNSTAEESAAGVQTVLSAAMT NQYTCLDGFAGPSASEDGRVRPFIQGRIYHVAHLVSNSLAMVRRLPTQRRRGAEEEPLEG YGRVRRGFPSWVSASDRRRLQQQVAADVVVAKDGSGKFTTVSEAVAAAPNNSETRYVIYI KAGGYFENVEVGSEKTNIMFVGDGTWKTVIKASRNVVDNSTTFRSATLAVVGTGFLARDI TVENAAGPSKHQAVALRVNADLSAFYRCSFAGYQDTLYAHSLRQFYRDCDIYGTVDFIFG DAAVVLQNCNLYARRPDPNQKNVFTAQGREDPNQNTGIAIQGCKVAAAADLVPVQANFSS YLGRPWKTYSRTVFLQSKIDSLIHPRGWLEWNGSFALDTLYYAEYMNRGDGADTSARVSW PGYHVLTNATDAANFTVLNFVQGDLWLNSSSFPYILGLS

Transcript Sequence

Transcript ID	Os07t0675100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28559086:28562956:-1 gene:Os07g0675100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 22 description:Similar to Pectin methylesterase isoform alpha (EC 3.1.1.11) (Fragment). (Os07t0675100-01)
Sequence	CACTAGCACACTGTCAGTCCTTGTCACGTTTGCTACGGCCATCCCGTCCAATCCACCGCA GAAACGCCAATGCCACCTCCAAGAACCAAGCACCGGCCGCTTCTCCTCGCCACCACCTTC CTCTCCCTTCTGCTGCTGCTGCTGCTGCTCAGCTTGCTCTCCACCGCGCACAAGGCATTC GCCGTCGCTGACGACGACGGCCACCGCGCGCGCGTGCTTCTTGCAGCAGACGGCGGCGAG AGGAATGCCGATGCCGAGCACGCGGCCGCCGTGGACCGGCATTGCGCCGGGACGCTCCAC CGGGACGTCTGCGTGTCGACGCTGTCCACCATCCCGAACCTCGCGCGGAAGCCGCTCCGG GACGTGATCTCCGAGGTCGTGGGGCGCGCCGCGTCGGCGGTGCGCGCGTCGTCGTCCAAC TGCACGTCCTACCTCCAGCGGCCGCGGCAGCTGCGCACGCGCGACCGCCTCGCGCTGTCC GACTGCCTCGAGCTGTTCGGGCACACGCTGGACCTGCTGGGCACGGCGGCCGCGGAGCTC TCCGCCGGGAACAGCACCGCCGAGGAGTCCGCCGCCGGCGTGCAGACCGTGCTGTCGGCG GCGATGACGAACCAGTACACCTGCCTCGACGGGTTCGCCGGGCCGTCCGCCTCGGAGGAC GGGCGCGTCCGGCCGTTCATCCAGGGCCGCATCTACCACGTCGCCCACCTGGTCTCCAAC TCGCTCGCCATGGTGCGGCGCCTCCCGACCCAGCGGCGGCGCGGGGCGGAGGAGGAGCCA TTGGAAGGGTACGGCCGCGTGCGACGCGGGTTCCCGTCGTGGGTGTCGGCGTCGGACCGG AGGCGGCTGCAGCAGCAGGTGGCGGCGGACGTGGTGGTGGCGAAGGACGGGAGCGGGAAG TTCACGACGGTGAGCGAGGCGGTGGCGGCGGCGCCGAACAACAGCGAGACGCGGTACGTG ATATACATCAAGGCCGGCGGGTACTTCGAGAACGTGGAGGTCGGGAGCGAGAAGACCAAC ATCATGTTCGTCGGCGACGGCACGTGGAAGACCGTCATCAAGGCCAGCCGCAACGTCGTC GACAACTCCACCACCTTCCGCTCTGCCACGCTCGCCGTGGTGGGCACGGGGTTTCTGGCG CGGGACATAACGGTGGAGAACGCGGCGGGGCCGAGCAAGCACCAGGCGGTGGCGCTGCGG GTGAACGCCGACCTGTCGGCGTTCTACCGGTGCAGCTTCGCGGGCTACCAGGACACGCTG TACGCGCACTCGCTTCGCCAGTTCTACCGCGACTGCGACATCTACGGCACGGTGGACTTC ATCTTCGGCGACGCCGCCGTCGTGCTCCAGAACTGCAACCTCTACGCGCGCCGCCCGGAC CCCAACCAGAAGAATGTGTTCACGGCGCAGGGCCGGGAGGACCCCAACCAGAACACCGGC ATCGCCATCCAGGGCTGCAAGGTCGCCGCCGCCGCCGACCTCGTCCCCGTCCAGGCCAAC TTCTCCTCCTACCTCGGCCGCCCGTGGAAGACCTACTCGCGCACGGTGTTCCTGCAGTCC AAGATCGACAGCCTGATACACCCCAGGGGGTGGCTCGAGTGGAACGGCAGCTTCGCGCTC GACACGCTCTACTACGCCGAGTACATGAACCGCGGCGACGGCGCCGACACGTCGGCGAGG GTGTCGTGGCCGGGGTACCACGTGCTCACCAACGCCACCGACGCGGCCAACTTCACCGTG CTCAACTTCGTGCAGGGTGACCTCTGGCTCAACTCCAGCTCGTTCCCCTACATCTTGGGG TTGAGCTGAAAGTGGTGGCTTCTGGACAGTCTCTGGAGATGGGGATTTTTGGGTCTTATA CTGGTTTTGGTCCTTTTTGGAATAAGAGTAGCTCATCACAGGTTTAAGATAATTTGTAGT AAACCTGGAGCTACCACCAGGCCATCACCACCAAGTGTTTTGTTACGAGGGTTGAAGCCT ACAATGGCCGAAGGCTAATCATTGGAAGGGGATAGGTTCATTGCTTCTGAGCT