Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0674700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28537617:28540104:1 gene:Os07g0674700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L18. (Os07t0674700-01)
Sequence

ATGGGTATCGACCTCGTCGCCGGCGGCCGGAACAAGAAGACCAAGCGCACGGCGCCCAGG
TCCGAGGATGTCTACCTCAAGCTCATCGTCAAGCTCTACCGCTTCCTGGTGCGGAGGACC
AAGAGCCACTTCAACGCCGTGATCCTGAAGCGGCTCTTCATGAGCAAGACCAACCGCCCG
CCGCTCTCGATGCGCCGTCTCGTCAGGTTCATGGAGGGGAAGGTACCTGATCGCCATGCC
ATTTCGGGGGACCAGATCGCCGTGATCGTGGGCACCGTCACAGATGACAAGAGGATCTAT
GAGGTGCCGGCGATGAAGGTGGCTGCTCTCAGGTTCACCGAGACCGCGAGAGCACGGATC
ATCAATGCCGGTGGCGAGTGCCTCACGTTCGACCAGCTCGCTCTCCGCGCCCCGCTTGGC
CAGAACACGGTCCTCCTGAGGGGTCCCAAGAACGCTAGGGAAGCTGTTAAGCACTTTGGC
CCTGCTCCAGGAGTTCCCCACAGCAACACTAAGCCATATGTTCGCTCAAAGGGAAGGAAA
TTTGAGAAGGCAAGAGGAAGAAGGAACAGCAAGGGCTTCAAGGTATAA

Peptide Sequence

PEP ID

Os07t0674700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28537617:28540104:1 gene:Os07g0674700 transcript:Os07t0674700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L18. (Os07t0674700-01)
Sequence

MGIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRP
PLSMRRLVRFMEGKVPDRHAISGDQIAVIVGTVTDDKRIYEVPAMKVAALRFTETARARI
INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRK
FEKARGRRNSKGFKV

Transcript Sequence

Transcript ID

Os07t0674700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28537617:28540104:1 gene:Os07g0674700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L18. (Os07t0674700-01)
Sequence

ATTCGCCGCCGCCGCCGCCGCCGGAAAACCATGGGTATCGACCTCGTCGCCGGCGGCCGG
AACAAGAAGACCAAGCGCACGGCGCCCAGGTCCGAGGATGTCTACCTCAAGCTCATCGTC
AAGCTCTACCGCTTCCTGGTGCGGAGGACCAAGAGCCACTTCAACGCCGTGATCCTGAAG
CGGCTCTTCATGAGCAAGACCAACCGCCCGCCGCTCTCGATGCGCCGTCTCGTCAGGTTC
ATGGAGGGGAAGGTACCTGATCGCCATGCCATTTCGGGGGACCAGATCGCCGTGATCGTG
GGCACCGTCACAGATGACAAGAGGATCTATGAGGTGCCGGCGATGAAGGTGGCTGCTCTC
AGGTTCACCGAGACCGCGAGAGCACGGATCATCAATGCCGGTGGCGAGTGCCTCACGTTC
GACCAGCTCGCTCTCCGCGCCCCGCTTGGCCAGAACACGGTCCTCCTGAGGGGTCCCAAG
AACGCTAGGGAAGCTGTTAAGCACTTTGGCCCTGCTCCAGGAGTTCCCCACAGCAACACT
AAGCCATATGTTCGCTCAAAGGGAAGGAAATTTGAGAAGGCAAGAGGAAGAAGGAACAGC
AAGGGCTTCAAGGTATAAGTTGTGGCAGCTTTGGCACCATTACACCAAACTGCTCATATC
AGTTAGACATCACTGTTTTGGATGCCAGACTTGCACTGTTGTTTTGGATGCTAGACTTAC
ACTGTTTTAGATGTCAAAATATTGTGTTACTGACTTCACAGGAACAATTAAATTGTTTAC
CTCCTTTGCACTTCAAGATATTTGTTTGGCGTCTCGCATTATGAATATAATCTCCTTTAT
TTATGAGGC