Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0674400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28531925:28532701:1 gene:Os07g0674400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os07t0674400-01)
Sequence

ATGGCGTCACGGGTCGTCGTCCTCCTCGTGGTCGCGGCGGCGTGCGTGCTCGGCGCCGCA
GACGCGAAGCTCGGCAGGCTGGTCGTCACCGGCGTCGTGCCCTGCAACACCGGCAGCCTC
ATCGATATCGCCACGTCCCCCGCCTTCCCAAACGCGGACGTGGAGCTGAGGTGCGCGGGG
AAGCTGGTGGCGGGGGCGACGACGAACAGCAACGGGTCGTTCGCGATGGAGGCGGACCTG
ACGAGCGGGCTGGCGATGCTCATCGGCGGGTGCAAGCTGGTGGTGGACACGCCGCTGATC
AAGTGCGACGCCAACCTGCCGGCGGCGGGGAGCCTCGTCTCCTACCTGCAGGGCCCGCTC
ACCAGGCTGCTCGGCGGCATCTTCCGCCTCTTCCCCGCCGGCTTCTCCTTCCACGCCCAC
TAA

Peptide Sequence

PEP ID

Os07t0674400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28531925:28532701:1 gene:Os07g0674400 transcript:Os07t0674400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os07t0674400-01)
Sequence

MASRVVVLLVVAAACVLGAADAKLGRLVVTGVVPCNTGSLIDIATSPAFPNADVELRCAG
KLVAGATTNSNGSFAMEADLTSGLAMLIGGCKLVVDTPLIKCDANLPAAGSLVSYLQGPL
TRLLGGIFRLFPAGFSFHAH

Transcript Sequence

Transcript ID

Os07t0674400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28531925:28532701:1 gene:Os07g0674400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os07t0674400-01)
Sequence

CCGACAAATGGCGTCACGGGTCGTCGTCCTCCTCGTGGTCGCGGCGGCGTGCGTGCTCGG
CGCCGCAGACGCGAAGCTCGGCAGGCTGGTCGTCACCGGCGTCGTGCCCTGCAACACCGG
CAGCCTCATCGATATCGCCACGTCCCCCGCCTTCCCAAACGCGGACGTGGAGCTGAGGTG
CGCGGGGAAGCTGGTGGCGGGGGCGACGACGAACAGCAACGGGTCGTTCGCGATGGAGGC
GGACCTGACGAGCGGGCTGGCGATGCTCATCGGCGGGTGCAAGCTGGTGGTGGACACGCC
GCTGATCAAGTGCGACGCCAACCTGCCGGCGGCGGGGAGCCTCGTCTCCTACCTGCAGGG
CCCGCTCACCAGGCTGCTCGGCGGCATCTTCCGCCTCTTCCCCGCCGGCTTCTCCTTCCA
CGCCCACTAATATACAACATCTCATTATGCAAATCTCGATTTGGTCCTATCTTGTCTATG
GAAACTGGATGTACCGTAATTTCTACTAGTAGAATACTAGTAGTACGTAGTACTGATCTC
ATCTGTATCGCCTGTACGCTGAAGCTCATTGGCCTGCTTAGAGCAGGAGTTGCGAATGTT
TTCTTGGTCAGATGAATGCTGTATGGGTCTAAAATTACTGTTACCTTGTTCTGAACCTAA
GTTAATGTCAATGATCGACTGAATAT