Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0673200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:28452751:28456565:-1 gene:Os07g0673200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrogen limitation adaptation 1 description:RING-type E3 ubiquitin-ligase, Maintenance of phosphate homeostasis via degradation of phosphate transporters (Os07t0673200-01)
Sequence	ATGAAGTTTGCCAAGAAGTACGAGAAGTACATGAAGGGGATGGATGAGGAGCTCCCGGGC GTGGGGCTGAAGCGGCTCAAGAAATTGCTCAAGAAATGCCGCTCTGACCTCCAATCCCAC GAGAACGACGGCTCCTCCGCCGGCCGCTGCCCCGGCCATTGCTCTGTATGTGATGGGAGT TTTTTCCCATCTCTTCTCAATGAGATGTCAGCCGTTATTGGCTGCTTCAATGAAAAGGCC AAGAAGCTTCTCGAGTTGCACCTGGCATCAGGTTTCAAGAAATATACAATGTGGTTCACC AGCAAGGGTCACAAGAGCCATGGGGCATTGATACAGCAAGGCAAAGACTTGGTTACTTAT GCAATTATAAATGCCGTGGCCATGAGGAAAATTTTAAAGAAATATGACAAGATACATTAC TCGAAGCAAGGGCAGGAATTCAAAGCTCAAGCCCAGAGTCTGCATATTGAAATACTTCAA TCCCCATGGCTCTGTGAGCTGATGGCTTTCTACATGAACTTGAGAAGAAGCAAGAAGAAC AACGGTGCTATGGAGCTCTTTGGGGATTGTTCTCTCGTATTCGATGATGACAAACCAACA ATTTCATGCAACCTCTTTGACTCTATGCGTGTCGACATTAGCTTGACATGTTCGATTTGC TTGGATACCGTGTTTGATCCAGTTGCTCTTTCCTGTGGTCACATATATTGCTACTTGTGC AGCTGTTCTGCTGCATCCGTTACGATCGTTGATGGGCTGAAGTCTGCCGAGCGCAAATCA AAGTGCCCACTGTGCCGACAGGCAGGAGTCTTTCCTAATGCTGTACACTTGGATGAGCTG AACATGCTACTAAGCTATAGTTGTCCAGAGTACTGGGAGAAGAGAATACAGATGGAGCGG GTTGAACGTGTTCGTCTGGCTAAGGAACACTGGGAGTCACAGTGCAGGGCATTCTTGGGC ATGTGA

Peptide Sequence

PEP ID	Os07t0673200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:28452751:28456565:-1 gene:Os07g0673200 transcript:Os07t0673200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrogen limitation adaptation 1 description:RING-type E3 ubiquitin-ligase, Maintenance of phosphate homeostasis via degradation of phosphate transporters (Os07t0673200-01)
Sequence	MKFAKKYEKYMKGMDEELPGVGLKRLKKLLKKCRSDLQSHENDGSSAGRCPGHCSVCDGS FFPSLLNEMSAVIGCFNEKAKKLLELHLASGFKKYTMWFTSKGHKSHGALIQQGKDLVTY AIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLRRSKKN NGAMELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCSICLDTVFDPVALSCGHIYCYLC SCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVHLDELNMLLSYSCPEYWEKRIQMER VERVRLAKEHWESQCRAFLGM

Transcript Sequence

Transcript ID	Os07t0673200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28452751:28456565:-1 gene:Os07g0673200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrogen limitation adaptation 1 description:RING-type E3 ubiquitin-ligase, Maintenance of phosphate homeostasis via degradation of phosphate transporters (Os07t0673200-01)
Sequence	TCGTTTCACCCTGCTCGGAAAAAAAATCCTAAAAGCTTAATTTCTTTCTTTGTTCTTATT ACTGTCTCACGTGAGACGCCTGAGCTCAACTGAATTTCTGGCCCCCTCTTCATCTCCGTG AGCTTCGCTGCCCTTTTTCTTTGCCTTCTCTTGGTGGTTTAATTTCATCAGTTTTCCTCC ATTTCCTTCTTTAGCCATTGTTCCGATTGCCGTCTCTTGTTGCATGTGCATTCCTTCTCT GAACCGTGCCCCCCCAATTCGTCCGCGAGCTATACAAATTTGGATTCGTTTTGTTCGTTT CCAGCTCACCCTGTAAATCGTTTCTCAAGTCATTCAGGCATACTCACATCGCACAAACAT ATATATACCCCAAGATTTTGAATCCATCAATTTGCAGACGCCATAGGCGTACAAGTTATC CATTCAAGCGCTCCAAAAATTTGCCAAGAAGTTTGCCTTAAATTTGGATTCATGAAGTTT GCCAAGAAGTACGAGAAGTACATGAAGGGGATGGATGAGGAGCTCCCGGGCGTGGGGCTG AAGCGGCTCAAGAAATTGCTCAAGAAATGCCGCTCTGACCTCCAATCCCACGAGAACGAC GGCTCCTCCGCCGGCCGCTGCCCCGGCCATTGCTCTGTATGTGATGGGAGTTTTTTCCCA TCTCTTCTCAATGAGATGTCAGCCGTTATTGGCTGCTTCAATGAAAAGGCCAAGAAGCTT CTCGAGTTGCACCTGGCATCAGGTTTCAAGAAATATACAATGTGGTTCACCAGCAAGGGT CACAAGAGCCATGGGGCATTGATACAGCAAGGCAAAGACTTGGTTACTTATGCAATTATA AATGCCGTGGCCATGAGGAAAATTTTAAAGAAATATGACAAGATACATTACTCGAAGCAA GGGCAGGAATTCAAAGCTCAAGCCCAGAGTCTGCATATTGAAATACTTCAATCCCCATGG CTCTGTGAGCTGATGGCTTTCTACATGAACTTGAGAAGAAGCAAGAAGAACAACGGTGCT ATGGAGCTCTTTGGGGATTGTTCTCTCGTATTCGATGATGACAAACCAACAATTTCATGC AACCTCTTTGACTCTATGCGTGTCGACATTAGCTTGACATGTTCGATTTGCTTGGATACC GTGTTTGATCCAGTTGCTCTTTCCTGTGGTCACATATATTGCTACTTGTGCAGCTGTTCT GCTGCATCCGTTACGATCGTTGATGGGCTGAAGTCTGCCGAGCGCAAATCAAAGTGCCCA CTGTGCCGACAGGCAGGAGTCTTTCCTAATGCTGTACACTTGGATGAGCTGAACATGCTA CTAAGCTATAGTTGTCCAGAGTACTGGGAGAAGAGAATACAGATGGAGCGGGTTGAACGT GTTCGTCTGGCTAAGGAACACTGGGAGTCACAGTGCAGGGCATTCTTGGGCATGTGATTC TAAAGTTGGTGGATTTTTTTTTTCTTTAGAGGGGCTTCATATGTGATGTATAGTTTCTTG ACAAAATGGAATTTGCCATTTGTTGTCACTTATATCCTGCTCTGTTGCTCCTCTTTGTGT AAGAAGTTGGATTTGTCATCCTAAATGCAAAAACAGCAGGGGTTGTTCACTACTGTGCAC TTAGATGTAAATAGGGTAGATTTGTAGTCATTGTTCAAGTGCATAACTGTAAATTCATTT ATATTTGATCAGT