Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0672500-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:28423644:28435286:1 gene:Os07g0672500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0672500-01);ATPase, AAA-type, core domain containing protein. (Os07t0672500-02)
Sequence	ATGGTGGATACGCGGCGGAGCGCCGCGGCGAAGCGGCGGGCGTCGTCGGAGGAGGCGGCA TCGCCGGCGACGGATGGGGCTGCGGCGGGGGCGGGGGCGGCGGGGAGTTCCACGCCTCGG AGGCGGTCGGGGAAGCGGGCGAAGGCGGAGGCGACGGTAGGGACTCCCGCGGCGAAGGCG GGGGGAGCAGACGCGACGGCGGCGGCGGCGATAGATGTGATCGATAGCTCGGTGGAAAAC CTGCACGGTGTGGCGAGGCCCACGGGCGCCGTACCGGCGTCGTCAACGGTGTCCAACTCT GGAGTGAAGAAGAAAAGGACAAAGTATATAAATGTTCCATCAGCGGAAGAACTCTCACTC TGGAAGGCAAGGCAGGCGGTGGCGAACGGGCGTGCTGAGGCTTGGGGAAGACTGATTTCT CAATCTTCCGAGTCTCCTTCAGTACCTATTTATACTACTCATTTTACGGTTGGCCATGGT GGAAATTATGATTTGAGGCTGACAGAGTCATTTCCTGGATCACTTATTTGCAAATTGAAG CATGTTAAGAGGGGTGCTGCTCTTGAGATTTACGTATCTAAAGCTGTCCATGTAAATGGG AAGGTATTAGATAAGACTGCTAAGGTCACATTGGTTGGAGGCGATGAAGTTATTTTTAGT TCACTTGGGAGACATGCTTATATATTTCAGCAACTTCCAGAGGAAAGATCAAGCACATCA ACATTTTCGGCCACATGTGCTTTTCAGCAAGGGCAATATCCAGTTACCAAAGGTACATTG GATGTATCATCTAAAGGAGCCAAGCTATCAGTAATGCCCTTTAACTTTGGAAATGGCCGC CCTCCGTTGGTTCCTCATGATACAGAGATAGTCAGCAGTTTATGTAAAACAATGGAGGAA CAGAGCCAGCTTGCTTCTGAAGAAAATTTACAGGTTGCTCAACATCAACTGTTGAAAGAG GATCTGAAGAAGGTGGTCGTTAATGCAAGTGATATATCAGATTCATTTGATAGTTTTCCA TATTATCTGAGTGAGAATACCAAAAATGCTCTCCTGTCTTCAGCGTATGTAAACTTATGT TGCAAGGAATCCATCAAATGGACAAAACATATATCTTCTCTTTGCCAACGGGTATTATTG TCTGGTCCAGCTGGATCTGAGATATACCAAGAATCATTAGTGAAGGCTCTTACCAAACAC TTTGGTGCTAAGCTGCTCATTATAGATCCTTCGTTGCTGGCGAGTGGACAGTCTTCAAAG TCGAAGGAATCTGAGTCGTACAAAAAAGGAGATAGGGTGAGATACATTGGTTCAGTACAA TCAACAGGGATTATCCTTGAGGGACAAAGAGCTCCAGATTATGGCTCACAAGGTGAAGTT AGGCTTCCTTTTGAGGAAAATGAATCCTCGAAAGTTGGAGTCAGATTTGATAAAAAGATT CCTGGTGGCATTGATCTTGGAGGCAATTGCGAGGTTGACCGTGGTTTCTTTTGTCCAGTT GATTCTCTTTGCCTCGATGGCCCAGGATGGGAAGATAGAGCTAAACATCCATTTGATGTA ATATACGAGTTTGCTTCCGAAGAAAGTCAGCATGGTCCTCTGATACTATTTTTGAAGGAT GTTGAGAAAATGTGTGGAAACAGTTACTCCTATCATGGCTTAAAGAATAAGATTGAAAGT TTCCCAGCTGGTGTTTTTATTGTTGGGTCCCAGATCCATACTGACAGTCGGAAAGACAAG TCAAACAGTGGCTCTCCTTTCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTC ACCTTCCAGGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG AAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAATACAAACACCGCAGGATGAATTG GAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTGAAATTCTGAAGGCAAAAGCT AACACGTCAAAGATCCAGTCGTTCTTAACCCGCAATGGTCTGGAATGTGCTGACATAGAG ACATCAGCATGTGTTAAAGATCGAATCCTTACAAATGAATGCGTCGATAAAGTCGTTGGT TATGCTTTGAGTCATCAATTTAAACATAGCACAATCCCAACTCGTGAAAATGATGGATTA CTTGCCCTTTCTGGTGAAAGCCTTAAGCATGGAGTTGAGCTGTTGGATAGCATGCAAAGT GACCCTAAAAAGAAGAGCACAAAAAAATCACTTAAGGATGTAACGACAGAGAATGAATTC GAAAAACGGCTTCTTGGTGATGTGATCCCTCCAGATGAGATAGGTGTTACCTTTGAGGAC ATTGGAGCACTAGAAAATGTCAAGGAAACTTTGAAGGAACTAGTGATGCTTCCGTTGCAA AGGCCCGAATTGTTCTCCAAAGGACAACTTATGAAGCCATGTAAGGGAATATTGCTTTTT GGCCCACCTGGTACGGGGAAGACCATGCTTGCTAAAGCTGTTGCAACAGAGGCTGGCGCC AATTTTATCAACATATCAATGTCTAGTATTGCTTCAAAGTGGTTTGGCGAGGGTGAGAAA TATGTCAAAGCTGTGTTTTCACTTGCAAGCAAAATTGCTCCTAGTGTCATTTTTGTGGAT GAGGTTGATGGCATGCTGGGTAGAAGGGAGAACCCAGGGGAACATGAAGCTATGCGCAAG ATGAAAAATGAGTTTATGGTAAATTGGGATGGTCTGAGAACAAAAGATAAAGAACGCGTA TTAGTACTTGCTGCCACCAATAGACCATTTGATCTTGATGAAGCTGTTGTTAGGAGGCTC CCCAGGAGGTTGATGGTGAATTTGCCAGATGCATCCAATAGAAAAAAGATTCTTAGCGTA ATACTGGCCAAAGAAGATTTGGCTGATGATGTAGATCTGGAAGCTCTGGCTAACTTGACT GATGGTTATTCAGGCAGTGATATGAAGAATCTGTGTGTAACTGCTGCACATTGCCCCATA AGGGAGATCCTTGAAAGAGAGAAGAAGGAGAGAGCATCAGCAGAAGCAGAAAATAAACCA TTACCTCCCCCTCGTTCTAGCAGTGATGTTCGTTCCCTAAGAATGAACGATTTCAAACAT GCACATGAGCAGGTATGTGCAAGTATAACATCTGATTCGAGAAATATGACTGAGCTTATT CAGTGGAACGATCTATATGGAGAAGGCGGGTCCAGGAAGAAGACTTCTCTAAGCTACTTC ATGTAG

Peptide Sequence

PEP ID	Os07t0672500-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:28423644:28435286:1 gene:Os07g0672500 transcript:Os07t0672500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0672500-01);ATPase, AAA-type, core domain containing protein. (Os07t0672500-02)
Sequence	MVDTRRSAAAKRRASSEEAASPATDGAAAGAGAAGSSTPRRRSGKRAKAEATVGTPAAKA GGADATAAAAIDVIDSSVENLHGVARPTGAVPASSTVSNSGVKKKRTKYINVPSAEELSL WKARQAVANGRAEAWGRLISQSSESPSVPIYTTHFTVGHGGNYDLRLTESFPGSLICKLK HVKRGAALEIYVSKAVHVNGKVLDKTAKVTLVGGDEVIFSSLGRHAYIFQQLPEERSSTS TFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNGRPPLVPHDTEIVSSLCKTMEE QSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNALLSSAYVNLC CKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLIIDPSLLASGQSSK SKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSKVGVRFDKKI PGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLILFLKD VEKMCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILDL TFQDSFGRVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKA NTSKIQSFLTRNGLECADIETSACVKDRILTNECVDKVVGYALSHQFKHSTIPTRENDGL LALSGESLKHGVELLDSMQSDPKKKSTKKSLKDVTTENEFEKRLLGDVIPPDEIGVTFED IGALENVKETLKELVMLPLQRPELFSKGQLMKPCKGILLFGPPGTGKTMLAKAVATEAGA NFINISMSSIASKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDGMLGRRENPGEHEAMRK MKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDASNRKKILSV ILAKEDLADDVDLEALANLTDGYSGSDMKNLCVTAAHCPIREILEREKKERASAEAENKP LPPPRSSSDVRSLRMNDFKHAHEQVCASITSDSRNMTELIQWNDLYGEGGSRKKTSLSYF M

Transcript Sequence

Transcript ID	Os07t0672500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28423644:28435286:1 gene:Os07g0672500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0672500-01);ATPase, AAA-type, core domain containing protein. (Os07t0672500-02)
Sequence	GCGTTCCTTAAACGGAAAAGAGGGGAGAACCCCAAGCCTCTTCTTCTCTCCGTGGTATCG TCTCGGCTCGGCGCGCGAAATTACGGTTCGGTCCCTCGCGGCGGCCGCCTTCCTTCCTCC TCTTCCCTTTGCGTGCGCGCGTCGCCGATCCGGGGGAGCGATGGTGGATACGCGGCGGAG CGCCGCGGCGAAGCGGCGGGCGTCGTCGGAGGAGGCGGCATCGCCGGCGACGGATGGGGC TGCGGCGGGGGCGGGGGCGGCGGGGAGTTCCACGCCTCGGAGGCGGTCGGGGAAGCGGGC GAAGGCGGAGGCGACGGTAGGGACTCCCGCGGCGAAGGCGGGGGGAGCAGACGCGACGGC GGCGGCGGCGATAGATGTGATCGATAGCTCGGTGGAAAACCTGCACGGTGTGGCGAGGCC CACGGGCGCCGTACCGGCGTCGTCAACGGTGTCCAACTCTGGAGTGAAGAAGAAAAGGAC AAAGTATATAAATGTTCCATCAGCGGAAGAACTCTCACTCTGGAAGGCAAGGCAGGCGGT GGCGAACGGGCGTGCTGAGGCTTGGGGAAGACTGATTTCTCAATCTTCCGAGTCTCCTTC AGTACCTATTTATACTACTCATTTTACGGTTGGCCATGGTGGAAATTATGATTTGAGGCT GACAGAGTCATTTCCTGGATCACTTATTTGCAAATTGAAGCATGTTAAGAGGGGTGCTGC TCTTGAGATTTACGTATCTAAAGCTGTCCATGTAAATGGGAAGGTATTAGATAAGACTGC TAAGGTCACATTGGTTGGAGGCGATGAAGTTATTTTTAGTTCACTTGGGAGACATGCTTA TATATTTCAGCAACTTCCAGAGGAAAGATCAAGCACATCAACATTTTCGGCCACATGTGC TTTTCAGCAAGGGCAATATCCAGTTACCAAAGGTACATTGGATGTATCATCTAAAGGAGC CAAGCTATCAGTAATGCCCTTTAACTTTGGAAATGGCCGCCCTCCGTTGGTTCCTCATGA TACAGAGATAGTCAGCAGTTTATGTAAAACAATGGAGGAACAGAGCCAGCTTGCTTCTGA AGAAAATTTACAGGTTGCTCAACATCAACTGTTGAAAGAGGATCTGAAGAAGGTGGTCGT TAATGCAAGTGATATATCAGATTCATTTGATAGTTTTCCATATTATCTGAGTGAGAATAC CAAAAATGCTCTCCTGTCTTCAGCGTATGTAAACTTATGTTGCAAGGAATCCATCAAATG GACAAAACATATATCTTCTCTTTGCCAACGGGTATTATTGTCTGGTCCAGCTGGATCTGA GATATACCAAGAATCATTAGTGAAGGCTCTTACCAAACACTTTGGTGCTAAGCTGCTCAT TATAGATCCTTCGTTGCTGGCGAGTGGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTA CAAAAAAGGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGA GGGACAAAGAGCTCCAGATTATGGCTCACAAGGTGAAGTTAGGCTTCCTTTTGAGGAAAA TGAATCCTCGAAAGTTGGAGTCAGATTTGATAAAAAGATTCCTGGTGGCATTGATCTTGG AGGCAATTGCGAGGTTGACCGTGGTTTCTTTTGTCCAGTTGATTCTCTTTGCCTCGATGG CCCAGGATGGGAAGATAGAGCTAAACATCCATTTGATGTAATATACGAGTTTGCTTCCGA AGAAAGTCAGCATGGTCCTCTGATACTATTTTTGAAGGATGTTGAGAAAATGTGTGGAAA CAGTTACTCCTATCATGGCTTAAAGAATAAGATTGAAAGTTTCCCAGCTGGTGTTTTTAT TGTTGGGTCCCAGATCCATACTGACAGTCGGAAAGACAAGTCAAACAGTGGCTCTCCTTT CCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGGATAGCTTTGG TCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGAAGCATCTGACTAAACTCTT CCCAAATAAAGTGACAATACAAACACCGCAGGATGAATTGGAACTCTCACAGTGGAAACA GCTATTAGACCGTGATGTTGAAATTCTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTC GTTCTTAACCCGCAATGGTCTGGAATGTGCTGACATAGAGACATCAGCATGTGTTAAAGA TCGAATCCTTACAAATGAATGCGTCGATAAAGTCGTTGGTTATGCTTTGAGTCATCAATT TAAACATAGCACAATCCCAACTCGTGAAAATGATGGATTACTTGCCCTTTCTGGTGAAAG CCTTAAGCATGGAGTTGAGCTGTTGGATAGCATGCAAAGTGACCCTAAAAAGAAGAGCAC AAAAAAATCACTTAAGGATGTAACGACAGAGAATGAATTCGAAAAACGGCTTCTTGGTGA TGTGATCCCTCCAGATGAGATAGGTGTTACCTTTGAGGACATTGGAGCACTAGAAAATGT CAAGGAAACTTTGAAGGAACTAGTGATGCTTCCGTTGCAAAGGCCCGAATTGTTCTCCAA AGGACAACTTATGAAGCCATGTAAGGGAATATTGCTTTTTGGCCCACCTGGTACGGGGAA GACCATGCTTGCTAAAGCTGTTGCAACAGAGGCTGGCGCCAATTTTATCAACATATCAAT GTCTAGTATTGCTTCAAAGTGGTTTGGCGAGGGTGAGAAATATGTCAAAGCTGTGTTTTC ACTTGCAAGCAAAATTGCTCCTAGTGTCATTTTTGTGGATGAGGTTGATGGCATGCTGGG TAGAAGGGAGAACCCAGGGGAACATGAAGCTATGCGCAAGATGAAAAATGAGTTTATGGT AAATTGGGATGGTCTGAGAACAAAAGATAAAGAACGCGTATTAGTACTTGCTGCCACCAA TAGACCATTTGATCTTGATGAAGCTGTTGTTAGGAGGCTCCCCAGGAGGTTGATGGTGAA TTTGCCAGATGCATCCAATAGAAAAAAGATTCTTAGCGTAATACTGGCCAAAGAAGATTT GGCTGATGATGTAGATCTGGAAGCTCTGGCTAACTTGACTGATGGTTATTCAGGCAGTGA TATGAAGAATCTGTGTGTAACTGCTGCACATTGCCCCATAAGGGAGATCCTTGAAAGAGA GAAGAAGGAGAGAGCATCAGCAGAAGCAGAAAATAAACCATTACCTCCCCCTCGTTCTAG CAGTGATGTTCGTTCCCTAAGAATGAACGATTTCAAACATGCACATGAGCAGGTATGTGC AAGTATAACATCTGATTCGAGAAATATGACTGAGCTTATTCAGTGGAACGATCTATATGG AGAAGGCGGGTCCAGGAAGAAGACTTCTCTAAGCTACTTCATGTAGCCTATCGCTAGCCT ATGTACATACAACATAAGCATTAGCGTAAAGCGGTCCGGGAGATAGACAAGAAATAGCTC TTCTGTTGTTGTTCATGTATAGGTGATACCCAGTCAAATTAGTCGTTGATCTCTCTATTC ATGTCAACTGTAAGTTCGTTAGGCCGAAGTGTAGCGTAGAAAAACCGGTTTGGAACTTGA ACTATCAAGCCTGTAAGCCTGACCATCAGATCGGTTGATTTATGTCGACAGCCAGTGCAA TTCATTTAA