Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0671200-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:28373368:28375043:-1 gene:Os07g0671200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0671200-00)
Sequence	ATGGCGTCCGACTCCGAGTCGCCGGCGGCGGCGGCGGCGCCGGCGAAGTTACCGGCCACG CCGCTGGCGGGGTTCGTTTCGCTCCTCGCCGCGCGCCGCTTCGCGGCCGCTAAGTCGCTA CTCGCCTCCCTCGTCACGCCCCGCCTGCTCGCCGTCCCCTTCGCCGACCTGGCCGCCGCC TCCCTCCCTCGCGCCGCGCCGCGGCACGCCGTCACTGCCTTCTACGACATGCTCTTCCGC GCCTACGCGGACTCGGGCGCCGCCGCTCGCGCCGCCGAGGCCTTCGAGCTAACCGTATCC CGCCTCGGGGGGCTTGACCCCCGCTCCCTCACCTCCTCCCTCCTCTCGCTCCGGCGAGCA GGCCACCTCGACACCGCCGCCGACCTCCTCAAACAGGCTGCCACTTCTTGTCCTGACTCC GTCACGCCTCTCTCGGCGTCTGTCGTCGTCGACGGATACTGCAAGTCTGGCCGCGTCGCC CACGCCCGCCAGCTGCTCGACGAAATGCCTCGACACGGCGTGAAGGTTAACGCCTTGTGC TATAACTCGCTGCTAGACGCATACACGCGCGAAAAAGATGATGATCGGGTGGCAGAGATG CTAAAGGTAATGGAAAATGAAGGCATTGAGCCAACAGTCGGGACATATACAATCCTCGTC GATGGTTTATCGGCAGCCAGAGATATCACCAAGGTTGAGGCTGTGTTTGAAGAGATGAAG AGTAAGAATCTCTCAGGGGATGTCTACTTCTATTCTTCAGTCATCAACGCATACTGCCGT GCAGGGAATGTGCGGAGGGCATCGGAGGTGTTTGATGAATGTGTTGGGAATGGCATTGAG CCAAACGAGCATACGTATGGAGCATTGATCAATGGGTTCTGCAAGATTGGGCAGATGGAG GCTGCAGAGATGTTGGTGACAGATATGCAAGTTCGAGGGGTGGGAATTAACCAAATTGTT TTCAATACAATGATTGATGGGTATTGTCGGAAAAATATGGTGGACAAGGCTCTTGAAATA AAGATGATCATGGAGAAGATGGGCATCGAGCTGGATGTGTATACATACAACACACTAGCA TGTGGCCTCCGCAGGGCGAATAGAATGGATGAGGCCAAGAATCTATTGCGTATCATGATT GAGAAGGGTGTCAGGCCAAACCATGTAAGCTACACTACGTTGATCAGCATCCATTGCAAT GAAGGTGACATGGTCGAGGCAAGAAGGCTGTTTCGAGAGATGGCAGGAAATGGGGCAGAA CCTAGTCTGGTAACCTACAATGTTATGATGGATGGGTACATCAAGAAGGGGAGCATACGG GAGGCTGAGAGGTTCAAAAATGAGATGGAAAAGAAAGGGCTTGTTCCAGACATATACTCT TATGCAGCGTTAGTCCATGGGCACTGTGTCAATGGGAAGGTGGATGTGGCATTGAGGCTG TTTGAAGAGATGAAGCAGAGGGGGTCTAAACCCAACTTGGTGGCATATACTGCTCTGATA TCCGGCCTGGCCAAGGAAGGAAGATCAGAGGAGGCATTCCAGTTGTACGACAATATGCTG GGAGATGGATTGACCCCAGATGATGCTCTGTATTCTGCACTTGTAGGGAGCCTTCACACG GATAAAAAGCAAAATGTTAAACCACGAACAAATTAA

Peptide Sequence

PEP ID	Os07t0671200-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:28373368:28375043:-1 gene:Os07g0671200 transcript:Os07t0671200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0671200-00)
Sequence	MASDSESPAAAAAPAKLPATPLAGFVSLLAARRFAAAKSLLASLVTPRLLAVPFADLAAA SLPRAAPRHAVTAFYDMLFRAYADSGAAARAAEAFELTVSRLGGLDPRSLTSSLLSLRRA GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE PSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRL FEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHT DKKQNVKPRTN

Transcript Sequence

Transcript ID	Os07t0671200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28373368:28375043:-1 gene:Os07g0671200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0671200-00)
Sequence	TCCACCTCGCTCCCCCGCCGATGGCGTCCGACTCCGAGTCGCCGGCGGCGGCGGCGGCGC CGGCGAAGTTACCGGCCACGCCGCTGGCGGGGTTCGTTTCGCTCCTCGCCGCGCGCCGCT TCGCGGCCGCTAAGTCGCTACTCGCCTCCCTCGTCACGCCCCGCCTGCTCGCCGTCCCCT TCGCCGACCTGGCCGCCGCCTCCCTCCCTCGCGCCGCGCCGCGGCACGCCGTCACTGCCT TCTACGACATGCTCTTCCGCGCCTACGCGGACTCGGGCGCCGCCGCTCGCGCCGCCGAGG CCTTCGAGCTAACCGTATCCCGCCTCGGGGGGCTTGACCCCCGCTCCCTCACCTCCTCCC TCCTCTCGCTCCGGCGAGCAGGCCACCTCGACACCGCCGCCGACCTCCTCAAACAGGCTG CCACTTCTTGTCCTGACTCCGTCACGCCTCTCTCGGCGTCTGTCGTCGTCGACGGATACT GCAAGTCTGGCCGCGTCGCCCACGCCCGCCAGCTGCTCGACGAAATGCCTCGACACGGCG TGAAGGTTAACGCCTTGTGCTATAACTCGCTGCTAGACGCATACACGCGCGAAAAAGATG ATGATCGGGTGGCAGAGATGCTAAAGGTAATGGAAAATGAAGGCATTGAGCCAACAGTCG GGACATATACAATCCTCGTCGATGGTTTATCGGCAGCCAGAGATATCACCAAGGTTGAGG CTGTGTTTGAAGAGATGAAGAGTAAGAATCTCTCAGGGGATGTCTACTTCTATTCTTCAG TCATCAACGCATACTGCCGTGCAGGGAATGTGCGGAGGGCATCGGAGGTGTTTGATGAAT GTGTTGGGAATGGCATTGAGCCAAACGAGCATACGTATGGAGCATTGATCAATGGGTTCT GCAAGATTGGGCAGATGGAGGCTGCAGAGATGTTGGTGACAGATATGCAAGTTCGAGGGG TGGGAATTAACCAAATTGTTTTCAATACAATGATTGATGGGTATTGTCGGAAAAATATGG TGGACAAGGCTCTTGAAATAAAGATGATCATGGAGAAGATGGGCATCGAGCTGGATGTGT ATACATACAACACACTAGCATGTGGCCTCCGCAGGGCGAATAGAATGGATGAGGCCAAGA ATCTATTGCGTATCATGATTGAGAAGGGTGTCAGGCCAAACCATGTAAGCTACACTACGT TGATCAGCATCCATTGCAATGAAGGTGACATGGTCGAGGCAAGAAGGCTGTTTCGAGAGA TGGCAGGAAATGGGGCAGAACCTAGTCTGGTAACCTACAATGTTATGATGGATGGGTACA TCAAGAAGGGGAGCATACGGGAGGCTGAGAGGTTCAAAAATGAGATGGAAAAGAAAGGGC TTGTTCCAGACATATACTCTTATGCAGCGTTAGTCCATGGGCACTGTGTCAATGGGAAGG TGGATGTGGCATTGAGGCTGTTTGAAGAGATGAAGCAGAGGGGGTCTAAACCCAACTTGG TGGCATATACTGCTCTGATATCCGGCCTGGCCAAGGAAGGAAGATCAGAGGAGGCATTCC AGTTGTACGACAATATGCTGGGAGATGGATTGACCCCAGATGATGCTCTGTATTCTGCAC TTGTAGGGAGCCTTCACACGGATAAAAAGCAAAATGTTAAACCACGAACAAATTAA