Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0670600-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28352574:28354759:1 gene:Os07g0670600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis factor, NIP7 domain containing protein. (Os07t0670600-01)
Sequence

ATGAGGGCGCTCGACGAGAAGGAGACGAAGATGGTGTTCGAGAAGCTGTTCAAGTTCACG
GGGCCGAACCTGAAGCACCTCCTGGAGCGGCCGGCGGTGGAGGGGCCCGACCCGCAGGCC
GGGCGCTACTGCCTCCGCCTCCACAAGAACCGCGTCTACTACGCCTCCGAGGCGCTCGTC
CGCCGCGCCACCGCCGTCGCCCGCCCGCGCCTCGCCGGGGTCGGCACGCCCATCGGCAAG
TTCACCCACGGCGGCGCGTTCCACCTCACCGTCCACGCCCTCGACCTCCTCGCCGCCCAC
GCCCGCCGCCGCGTCTGGCTCAAGCCCGACACCGAGCGCTCCTTCCTCTTCGGCAACTCC
GTGCCCAAGTCCTCCCTCGCCCGCATCACAGAGAACACCAAGGCCAACGACGGCGTCGTC
GTCATGTCCATGGCCGACGTCCCGCTCGGCTTCGGCATCGCCGCCAGGTCGGCGCAGGAC
TGCAGGAAGGCCGACACCAACGCCGTCGTTGTGCTGCACCAGTCTGACGCAGGCGAGTAC
CTCCGCCGGGAGGAGGAGCTCATGTGA

Peptide Sequence

PEP ID

Os07t0670600-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28352574:28354759:1 gene:Os07g0670600 transcript:Os07t0670600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis factor, NIP7 domain containing protein. (Os07t0670600-01)
Sequence

MRALDEKETKMVFEKLFKFTGPNLKHLLERPAVEGPDPQAGRYCLRLHKNRVYYASEALV
RRATAVARPRLAGVGTPIGKFTHGGAFHLTVHALDLLAAHARRRVWLKPDTERSFLFGNS
VPKSSLARITENTKANDGVVVMSMADVPLGFGIAARSAQDCRKADTNAVVVLHQSDAGEY
LRREEELM

Transcript Sequence

Transcript ID

Os07t0670600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28352574:28354759:1 gene:Os07g0670600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis factor, NIP7 domain containing protein. (Os07t0670600-01)
Sequence

AGTCCTCCTCCATCCCCAAACTCCGCCGCCGCCGCCGTCACCGCCGCTCGCCACCGCCGC
GGCCGCCATGAGGGCGCTCGACGAGAAGGAGACGAAGATGGTGTTCGAGAAGCTGTTCAA
GTTCACGGGGCCGAACCTGAAGCACCTCCTGGAGCGGCCGGCGGTGGAGGGGCCCGACCC
GCAGGCCGGGCGCTACTGCCTCCGCCTCCACAAGAACCGCGTCTACTACGCCTCCGAGGC
GCTCGTCCGCCGCGCCACCGCCGTCGCCCGCCCGCGCCTCGCCGGGGTCGGCACGCCCAT
CGGCAAGTTCACCCACGGCGGCGCGTTCCACCTCACCGTCCACGCCCTCGACCTCCTCGC
CGCCCACGCCCGCCGCCGCGTCTGGCTCAAGCCCGACACCGAGCGCTCCTTCCTCTTCGG
CAACTCCGTGCCCAAGTCCTCCCTCGCCCGCATCACAGAGAACACCAAGGCCAACGACGG
CGTCGTCGTCATGTCCATGGCCGACGTCCCGCTCGGCTTCGGCATCGCCGCCAGGTCGGC
GCAGGACTGCAGGAAGGCCGACACCAACGCCGTCGTTGTGCTGCACCAGTCTGACGCAGG
CGAGTACCTCCGCCGGGAGGAGGAGCTCATGTGAGGTGTTGAGGTTTGACACATTGGCGT
GACTGCAGGACTGAAGGATGCGCTTCCTCTTCATGCGATAATTCGAAGTTTTTCTACCAC
CAGTAAATGTGCGATTTTTACCTAGTTTTAAGATAGTGGAGGTCTGTTGTATCATCTATC
TAGTAGAAAAATTTTGTTCCCAGGCTGTTCTATGGGCCTAAAAGTGTTCTGTTAAGCTGT
AACTTATCGGTAAGCTACTGCATGACTGAATGCTGCAGGCCTGCAGTAACATTTGATCGT
GATCAATGATATACTTGTCTTATGGACCCT